RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 NCAPD2Q15021 1401 aa9.55□□□□□ -0.88
RGPD1-201ENST00000398193 RARSP54136 660 aaKnown RBP9.55□□□□□ -0.88
RGPD1-201ENST00000398193 CENPQQ7L2Z9 268 aaPredicted RBP9.55□□□□□ -0.88
RGPD1-201ENST00000398193 FANCIQ9NVI1 1328 aa9.55□□□□□ -0.88
RGPD1-201ENST00000398193 RIPK4P57078 832 aa9.54□□□□□ -0.88
RGPD1-201ENST00000398193 GNAI1P63096 354 aa9.54□□□□□ -0.88
RGPD1-201ENST00000398193 EMILIN1Q9Y6C2 1016 aa9.54□□□□□ -0.88
RGPD1-201ENST00000398193 KCNH5Q8NCM2 988 aa9.54□□□□□ -0.88
RGPD1-201ENST00000398193 EXOC6Q8TAG9 804 aa9.54□□□□□ -0.88
RGPD1-201ENST00000398193 SPINK5Q9NQ38 1064 aaPredicted RBP9.54□□□□□ -0.88
RGPD1-201ENST00000398193 TCERG1O14776 1098 aaKnown RBP9.54□□□□□ -0.88
RGPD1-201ENST00000398193 ZNF853P0CG23 659 aa9.54□□□□□ -0.88
RGPD1-201ENST00000398193 BABAM1Q9NWV8 329 aa9.54□□□□□ -0.88
RGPD1-201ENST00000398193 LMO7Q8WWI1 1683 aa9.54□□□□□ -0.88
RGPD1-201ENST00000398193 PRKAR2BP31323 418 aa9.53□□□□□ -0.88
RGPD1-201ENST00000398193 CRBNQ96SW2 442 aa9.53□□□□□ -0.88
RGPD1-201ENST00000398193 CHMP4BQ9H444 224 aaKnown RBP9.53□□□□□ -0.88
RGPD1-201ENST00000398193 KDM2BQ8NHM5 1336 aa9.53□□□□□ -0.88
RGPD1-201ENST00000398193 OVOS2A0A0G2JMS6 1433 aa9.53□□□□□ -0.88
RGPD1-201ENST00000398193 STRCP1A6NGW2 1772 aa9.53□□□□□ -0.88
RGPD1-201ENST00000398193 EIF4A2Q14240 407 aaKnown RBP9.53□□□□□ -0.88
RGPD1-201ENST00000398193 IGSF1Q8N6C5 1336 aa9.53□□□□□ -0.88
RGPD1-201ENST00000398193 C1orf167Q5SNV9 1468 aa9.53□□□□□ -0.88
RGPD1-201ENST00000398193 KIAA0232Q92628 1395 aa9.53□□□□□ -0.88
RGPD1-201ENST00000398193 SENP3Q9H4L4 574 aaPredicted RBP9.53□□□□□ -0.88
RGPD1-201ENST00000398193 USP19O94966 1318 aa9.53□□□□□ -0.88
RGPD1-201ENST00000398193 CRYBG1Q9Y4K1 1723 aa9.52□□□□□ -0.88
RGPD1-201ENST00000398193 KIF16BQ96L93 1317 aa9.52□□□□□ -0.88
RGPD1-201ENST00000398193 NCKAP5LQ9HCH0 1330 aa9.52□□□□□ -0.88
RGPD1-201ENST00000398193 B4GALNT3Q6L9W6 998 aa9.52□□□□□ -0.89
RGPD1-201ENST00000398193 ARHGAP45Q92619 1136 aa9.52□□□□□ -0.89
RGPD1-201ENST00000398193 DMRT2Q9Y5R5 561 aa9.51□□□□□ -0.89
RGPD1-201ENST00000398193 IPO8O15397 1037 aaKnown RBP9.51□□□□□ -0.89
RGPD1-201ENST00000398193 C19orf44Q9H6X5 657 aa9.51□□□□□ -0.89
RGPD1-201ENST00000398193 ZRANB1Q9UGI0 708 aa9.51□□□□□ -0.89
RGPD1-201ENST00000398193 GAS2L2Q8NHY3 880 aa9.5□□□□□ -0.89
RGPD1-201ENST00000398193 CFAP44Q96MT7 982 aa9.5□□□□□ -0.89
RGPD1-201ENST00000398193 RRP7AQ9Y3A4 280 aaKnown RBP9.5□□□□□ -0.89
RGPD1-201ENST00000398193 STRCQ7RTU9 1775 aa9.5□□□□□ -0.89
RGPD1-201ENST00000398193 MAP3K19Q56UN5 1328 aa9.5□□□□□ -0.89
RGPD1-201ENST00000398193 PSME1Q06323 249 aa9.5□□□□□ -0.89
RGPD1-201ENST00000398193 ZKSCAN2Q63HK3 967 aa9.5□□□□□ -0.89
RGPD1-201ENST00000398193 PMFBP1Q8TBY8 1022 aa9.5□□□□□ -0.89
RGPD1-201ENST00000398193 XIRP1Q702N8 1843 aaKnown RBP9.5□□□□□ -0.89
RGPD1-201ENST00000398193 RRS1Q15050 365 aaKnown RBP9.49□□□□□ -0.89
RGPD1-201ENST00000398193 ADAMTS7Q9UKP4 1686 aa9.49□□□□□ -0.89
RGPD1-201ENST00000398193 HOXC9P31274 260 aa9.49□□□□□ -0.89
RGPD1-201ENST00000398193 N4BP2Q86UW6 1770 aaPredicted RBP9.49□□□□□ -0.89
RGPD1-201ENST00000398193 IP6K1Q92551 441 aa9.49□□□□□ -0.89
RGPD1-201ENST00000398193 CRB1P82279 1406 aa9.48□□□□□ -0.89
RGPD1-201ENST00000398193 CANXP27824 592 aaKnown RBP9.48□□□□□ -0.89
RGPD1-201ENST00000398193 AMPHP49418 695 aa9.47□□□□□ -0.89
RGPD1-201ENST00000398193 PROSER2Q86WR7 435 aaPredicted RBP9.47□□□□□ -0.89
RGPD1-201ENST00000398193 PPM1GO15355 546 aaPredicted RBP9.47□□□□□ -0.89
RGPD1-201ENST00000398193 NLRP6P59044 892 aa9.47□□□□□ -0.89
RGPD1-201ENST00000398193 BCAR3O75815 825 aa9.47□□□□□ -0.89
RGPD1-201ENST00000398193 PXDNQ92626 1479 aa9.47□□□□□ -0.89
RGPD1-201ENST00000398193 EXOSC9Q06265 439 aaKnown RBP9.47□□□□□ -0.89
RGPD1-201ENST00000398193 NEUROD2Q15784 382 aa9.47□□□□□ -0.89
RGPD1-201ENST00000398193 ABTB2Q8N961 1025 aa9.47□□□□□ -0.89
RGPD1-201ENST00000398193 PLIN1O60240 522 aa9.46□□□□□ -0.89
RGPD1-201ENST00000398193 CLUAP1Q96AJ1 413 aa9.46□□□□□ -0.89
RGPD1-201ENST00000398193 CHMP4AQ9BY43 222 aa9.46□□□□□ -0.89
RGPD1-201ENST00000398193 MVPQ14764 893 aaKnown RBP9.46□□□□□ -0.89
RGPD1-201ENST00000398193 MSH6P52701 1360 aa9.46□□□□□ -0.89
RGPD1-201ENST00000398193 PHACTR3Q96KR7 559 aa9.46□□□□□ -0.9
RGPD1-201ENST00000398193 DDX19BQ9UMR2 479 aa9.46□□□□□ -0.9
RGPD1-201ENST00000398193 VIRMAQ69YN4 1812 aaKnown RBP9.46□□□□□ -0.9
RGPD1-201ENST00000398193 TNS3Q68CZ2 1445 aa9.46□□□□□ -0.9
RGPD1-201ENST00000398193 DZIP1LQ8IYY4 767 aaKnown RBP9.45□□□□□ -0.9
RGPD1-201ENST00000398193 KDM3BQ7LBC6 1761 aa9.45□□□□□ -0.9
RGPD1-201ENST00000398193 ESCO1Q5FWF5 840 aa9.45□□□□□ -0.9
RGPD1-201ENST00000398193 COL18A1P39060 1754 aa9.45□□□□□ -0.9
RGPD1-201ENST00000398193 C20orf194Q5TEA3 1177 aa9.45□□□□□ -0.9
RGPD1-201ENST00000398193 SULT6B1Q6IMI4 303 aa9.45□□□□□ -0.9
RGPD1-201ENST00000398193 CADPS2Q86UW7 1296 aa9.45□□□□□ -0.9
RGPD1-201ENST00000398193 CHL1O00533 1208 aa9.45□□□□□ -0.9
RGPD1-201ENST00000398193 HMOX1P09601 288 aa9.45□□□□□ -0.9
RGPD1-201ENST00000398193 RBM19Q9Y4C8 960 aaKnown RBP9.45□□□□□ -0.9
RGPD1-201ENST00000398193 TMEM94Q12767 1356 aa9.45□□□□□ -0.9
RGPD1-201ENST00000398193 MAP3K5Q99683 1374 aa9.45□□□□□ -0.9
RGPD1-201ENST00000398193 NHSL1Q5SYE7 1610 aa9.45□□□□□ -0.9
RGPD1-201ENST00000398193 SMC4Q9NTJ3 1288 aa9.45□□□□□ -0.9
RGPD1-201ENST00000398193 ATF3P18847 181 aa9.44□□□□□ -0.9
RGPD1-201ENST00000398193 ATF7IPQ6VMQ6 1270 aa9.44□□□□□ -0.9
RGPD1-201ENST00000398193 MRPL50Q8N5N7 158 aaKnown RBP9.44□□□□□ -0.9
RGPD1-201ENST00000398193 SENP3-EIF4A1A0A087X0R7 540 aa9.44□□□□□ -0.9
RGPD1-201ENST00000398193 HSP90AB2PQ58FF8 381 aa9.44□□□□□ -0.9
RGPD1-201ENST00000398193 MBIPQ9NS73 344 aa9.44□□□□□ -0.9
RGPD1-201ENST00000398193 PARP4Q9UKK3 1724 aaKnown RBP9.44□□□□□ -0.9
RGPD1-201ENST00000398193 PXDNLA1KZ92 1463 aa9.43□□□□□ -0.9
RGPD1-201ENST00000398193 CPDO75976 1380 aa9.43□□□□□ -0.9
RGPD1-201ENST00000398193 API5Q9BZZ5 524 aaKnown RBP9.43□□□□□ -0.9
RGPD1-201ENST00000398193 RWDD1Q9H446 243 aaPredicted RBP9.43□□□□□ -0.9
RGPD1-201ENST00000398193 PTPRCP08575 1304 aa9.43□□□□□ -0.9
RGPD1-201ENST00000398193 VAMP4O75379 141 aa9.43□□□□□ -0.9
RGPD1-201ENST00000398193 HDAC1Q13547 482 aaPredicted RBP9.43□□□□□ -0.9
RGPD1-201ENST00000398193 EYA1Q99502 592 aa9.43□□□□□ -0.9
RGPD1-201ENST00000398193 NPHP3Q7Z494 1330 aa9.43□□□□□ -0.9
RGPD1-201ENST00000398193 PKD1L3Q7Z443 1732 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms