RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 TRDNQ13061 729 aa18.82■□□□□ 0.6
LSS-202ENST00000397728 CCDC57Q2TAC2 916 aa18.82■□□□□ 0.6
LSS-202ENST00000397728 REC8O95072 547 aa18.82■□□□□ 0.6
LSS-202ENST00000397728 AKAP17AQ02040 695 aaKnown RBP18.82■□□□□ 0.6
LSS-202ENST00000397728 ORAI2Q96SN7 254 aa18.82■□□□□ 0.6
LSS-202ENST00000397728 MARCH6O60337 910 aa18.81■□□□□ 0.6
LSS-202ENST00000397728 FAM161AQ3B820 660 aa18.81■□□□□ 0.6
LSS-202ENST00000397728 RASSF8Q8NHQ8 419 aa18.81■□□□□ 0.6
LSS-202ENST00000397728 CTDP1Q9Y5B0 961 aaPredicted RBP18.81■□□□□ 0.6
LSS-202ENST00000397728 NSD2O96028 1365 aa18.81■□□□□ 0.6
LSS-202ENST00000397728 DHX16O60231 1041 aaKnown RBP18.81■□□□□ 0.6
LSS-202ENST00000397728 KIF3AQ9Y496 699 aa18.81■□□□□ 0.6
LSS-202ENST00000397728 SAMD1Q6SPF0 538 aaPredicted RBP18.8■□□□□ 0.6
LSS-202ENST00000397728 ATF7IPQ6VMQ6 1270 aa18.8■□□□□ 0.6
LSS-202ENST00000397728 RBM19Q9Y4C8 960 aaKnown RBP18.8■□□□□ 0.6
LSS-202ENST00000397728 HTATSF1O43719 755 aaKnown RBP18.79■□□□□ 0.6
LSS-202ENST00000397728 CT47B1P0C2W7 299 aaPredicted RBP18.79■□□□□ 0.6
LSS-202ENST00000397728 DNAJC2Q99543 621 aaKnown RBP18.79■□□□□ 0.6
LSS-202ENST00000397728 BCL11BQ9C0K0 894 aaPredicted RBP18.79■□□□□ 0.6
LSS-202ENST00000397728 ZNF652Q9Y2D9 606 aa18.79■□□□□ 0.6
LSS-202ENST00000397728 YTHDC2Q9H6S0 1430 aaKnown RBP18.79■□□□□ 0.6
LSS-202ENST00000397728 LTKP29376 864 aa18.79■□□□□ 0.6
LSS-202ENST00000397728 ABCA8O94911 1581 aa18.79■□□□□ 0.6
LSS-202ENST00000397728 GCP02774 474 aa18.79■□□□□ 0.6
LSS-202ENST00000397728 TBC1D2BQ9UPU7 963 aa18.79■□□□□ 0.6
LSS-202ENST00000397728 DNMT1P26358 1616 aaKnown RBP18.79■□□□□ 0.6
LSS-202ENST00000397728 KAT6BQ8WYB5 2073 aa18.78■□□□□ 0.6
LSS-202ENST00000397728 AAMPQ13685 434 aa18.78■□□□□ 0.6
LSS-202ENST00000397728 FSD1Q9BTV5 496 aa18.78■□□□□ 0.6
LSS-202ENST00000397728 ANKRD36BQ8N2N9 1353 aa18.78■□□□□ 0.6
LSS-202ENST00000397728 TSPOAP1O95153 1857 aa18.78■□□□□ 0.6
LSS-202ENST00000397728 FMNL2Q96PY5 1086 aa18.78■□□□□ 0.6
LSS-202ENST00000397728 CFAP65Q6ZU64 1925 aaKnown RBP18.78■□□□□ 0.6
LSS-202ENST00000397728 CPLX2Q6PUV4 134 aaKnown RBP18.78■□□□□ 0.6
LSS-202ENST00000397728 ZCRB1Q8TBF4 217 aaKnown RBP18.77■□□□□ 0.6
LSS-202ENST00000397728 ACSBG1Q96GR2 724 aa18.77■□□□□ 0.6
LSS-202ENST00000397728 TMEM2Q9UHN6 1383 aa18.77■□□□□ 0.6
LSS-202ENST00000397728 DDB1Q16531 1140 aa18.77■□□□□ 0.6
LSS-202ENST00000397728 RNF20Q5VTR2 975 aa18.77■□□□□ 0.59
LSS-202ENST00000397728 PDE3AQ14432 1141 aa18.76■□□□□ 0.59
LSS-202ENST00000397728 FAM184AQ8NB25 1140 aa18.76■□□□□ 0.59
LSS-202ENST00000397728 ERCC6L2Q5T890 1561 aa18.76■□□□□ 0.59
LSS-202ENST00000397728 GNL3LQ9NVN8 582 aaKnown RBP18.76■□□□□ 0.59
LSS-202ENST00000397728 MAPKBP1O60336 1514 aa18.76■□□□□ 0.59
LSS-202ENST00000397728 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
LSS-202ENST00000397728 IFT57Q9NWB7 429 aa18.76■□□□□ 0.59
LSS-202ENST00000397728 SRGAP3O43295 1099 aa18.75■□□□□ 0.59
LSS-202ENST00000397728 FOXD4L5Q5VV16 416 aaPredicted RBP18.75■□□□□ 0.59
LSS-202ENST00000397728 FOXD4L4Q8WXT5 416 aaPredicted RBP18.75■□□□□ 0.59
LSS-202ENST00000397728 GBP4Q96PP9 640 aa18.75■□□□□ 0.59
LSS-202ENST00000397728 AMER1Q5JTC6 1135 aaPredicted RBP18.75■□□□□ 0.59
LSS-202ENST00000397728 MAGI3Q5TCQ9 1506 aa18.75■□□□□ 0.59
LSS-202ENST00000397728 ERC1Q8IUD2 1116 aa18.75■□□□□ 0.59
LSS-202ENST00000397728 SLAIN2Q9P270 581 aa18.75■□□□□ 0.59
LSS-202ENST00000397728 CCDC158Q5M9N0 1113 aa18.75■□□□□ 0.59
LSS-202ENST00000397728 FAM83GA6ND36 823 aa18.74■□□□□ 0.59
LSS-202ENST00000397728 RALGAPBQ86X10 1494 aa18.74■□□□□ 0.59
LSS-202ENST00000397728 AK7Q96M32 723 aa18.74■□□□□ 0.59
LSS-202ENST00000397728 PDE4AP27815 886 aa18.74■□□□□ 0.59
LSS-202ENST00000397728 CPLX1O14810 134 aa18.73■□□□□ 0.59
LSS-202ENST00000397728 H3BQV1 296 aa18.73■□□□□ 0.59
LSS-202ENST00000397728 IFFO2Q5TF58 517 aa18.73■□□□□ 0.59
LSS-202ENST00000397728 NFXL1Q6ZNB6 911 aa18.73■□□□□ 0.59
LSS-202ENST00000397728 PZPP20742 1482 aa18.73■□□□□ 0.59
LSS-202ENST00000397728 CEP126Q9P2H0 1117 aa18.73■□□□□ 0.59
LSS-202ENST00000397728 ADGRL2O95490 1459 aa18.73■□□□□ 0.59
LSS-202ENST00000397728 SLFN5Q08AF3 891 aa18.73■□□□□ 0.59
LSS-202ENST00000397728 TTC39AQ5SRH9 613 aa18.73■□□□□ 0.59
LSS-202ENST00000397728 INTS3Q68E01 1043 aaKnown RBP18.73■□□□□ 0.59
LSS-202ENST00000397728 LARP1Q6PKG0 1096 aaKnown RBP18.73■□□□□ 0.59
LSS-202ENST00000397728 RALYLQ86SE5 291 aaKnown RBP18.73■□□□□ 0.59
LSS-202ENST00000397728 BTG4Q9NY30 223 aa18.72■□□□□ 0.59
LSS-202ENST00000397728 ERICH2A1L162 156 aa18.72■□□□□ 0.59
LSS-202ENST00000397728 ZBTB3Q9H5J0 574 aa18.72■□□□□ 0.59
LSS-202ENST00000397728 PHF14O94880 888 aa18.72■□□□□ 0.59
LSS-202ENST00000397728 SF3A1Q15459 793 aaKnown RBP18.72■□□□□ 0.59
LSS-202ENST00000397728 DDX17Q92841 729 aaKnown RBP18.72■□□□□ 0.59
LSS-202ENST00000397728 MYD88Q99836 296 aa18.72■□□□□ 0.59
LSS-202ENST00000397728 IGHMBP2P38935 993 aaKnown RBP18.71■□□□□ 0.59
LSS-202ENST00000397728 NPATQ14207 1427 aa18.71■□□□□ 0.59
LSS-202ENST00000397728 CNTROBQ8N137 903 aa18.71■□□□□ 0.59
LSS-202ENST00000397728 GPTP24298 496 aa18.71■□□□□ 0.59
LSS-202ENST00000397728 CCDC34Q96HJ3 373 aa18.71■□□□□ 0.59
LSS-202ENST00000397728 TESK2Q96S53 571 aa18.71■□□□□ 0.59
LSS-202ENST00000397728 AEBP1Q8IUX7 1158 aa18.7■□□□□ 0.58
LSS-202ENST00000397728 CHMP4CQ96CF2 233 aa18.7■□□□□ 0.58
LSS-202ENST00000397728 ABCC11Q96J66 1382 aa18.7■□□□□ 0.58
LSS-202ENST00000397728 MAST1Q9Y2H9 1570 aa18.7■□□□□ 0.58
LSS-202ENST00000397728 MTMR7Q9Y216 660 aa18.7■□□□□ 0.58
LSS-202ENST00000397728 IL2RBP14784 551 aa18.7■□□□□ 0.58
LSS-202ENST00000397728 DBF4Q9UBU7 674 aaPredicted RBP18.7■□□□□ 0.58
LSS-202ENST00000397728 POLKQ9UBT6 870 aa18.7■□□□□ 0.58
LSS-202ENST00000397728 TRMT112Q9UI30 125 aaKnown RBP18.69■□□□□ 0.58
LSS-202ENST00000397728 TRPM2O94759 1503 aa18.69■□□□□ 0.58
LSS-202ENST00000397728 GOLGA6L6A8MZA4 724 aa18.69■□□□□ 0.58
LSS-202ENST00000397728 EIF4A2Q14240 407 aaKnown RBP18.69■□□□□ 0.58
LSS-202ENST00000397728 CWC22Q9HCG8 908 aaKnown RBP18.69■□□□□ 0.58
LSS-202ENST00000397728 ABCC1P33527 1531 aa18.69■□□□□ 0.58
LSS-202ENST00000397728 TEX13AQ9BXU3 409 aaPredicted RBP18.68■□□□□ 0.58
LSS-202ENST00000397728 MYO5CQ9NQX4 1742 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms