RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 PDE3AQ14432 1141 aa13.7□□□□□ -0.22
IFT140-202ENST00000397417 SRGAP3O43295 1099 aa13.69□□□□□ -0.22
IFT140-202ENST00000397417 FBXW7Q969H0 707 aa13.69□□□□□ -0.22
IFT140-202ENST00000397417 ARHGEF12Q9NZN5 1544 aa13.69□□□□□ -0.22
IFT140-202ENST00000397417 IGHDP01880 384 aa13.69□□□□□ -0.22
IFT140-202ENST00000397417 G3V3G9 751 aa13.69□□□□□ -0.22
IFT140-202ENST00000397417 DCAF8Q5TAQ9 597 aa13.69□□□□□ -0.22
IFT140-202ENST00000397417 PARD3Q8TEW0 1356 aa13.69□□□□□ -0.22
IFT140-202ENST00000397417 GNAT3A8MTJ3 354 aa13.68□□□□□ -0.22
IFT140-202ENST00000397417 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
IFT140-202ENST00000397417 ARID3AQ99856 593 aa13.68□□□□□ -0.22
IFT140-202ENST00000397417 MBIPQ9NS73 344 aa13.68□□□□□ -0.22
IFT140-202ENST00000397417 BCORL1Q5H9F3 1711 aa13.68□□□□□ -0.22
IFT140-202ENST00000397417 ADGBQ8N7X0 1667 aa13.68□□□□□ -0.22
IFT140-202ENST00000397417 LTKP29376 864 aa13.68□□□□□ -0.22
IFT140-202ENST00000397417 KDM5CP41229 1560 aa13.68□□□□□ -0.22
IFT140-202ENST00000397417 CHMP4AQ9BY43 222 aa13.68□□□□□ -0.22
IFT140-202ENST00000397417 ST18O60284 1047 aa13.68□□□□□ -0.22
IFT140-202ENST00000397417 MBD5Q9P267 1494 aa13.67□□□□□ -0.22
IFT140-202ENST00000397417 DUOX2Q9NRD8 1548 aa13.67□□□□□ -0.22
IFT140-202ENST00000397417 RLBP1P12271 317 aa13.67□□□□□ -0.22
IFT140-202ENST00000397417 TTC21BQ7Z4L5 1316 aa13.67□□□□□ -0.22
IFT140-202ENST00000397417 PLEKHH1Q9ULM0 1364 aa13.67□□□□□ -0.22
IFT140-202ENST00000397417 SHANK2Q9UPX8 1470 aa13.67□□□□□ -0.22
IFT140-202ENST00000397417 TAF7Q15545 349 aaPredicted RBP13.67□□□□□ -0.22
IFT140-202ENST00000397417 C8orf58Q8NAV2 365 aa13.67□□□□□ -0.22
IFT140-202ENST00000397417 WASHC4Q2M389 1173 aa13.66□□□□□ -0.22
IFT140-202ENST00000397417 SAMD1Q6SPF0 538 aaPredicted RBP13.66□□□□□ -0.22
IFT140-202ENST00000397417 SRCIN1Q9C0H9 1055 aa13.66□□□□□ -0.22
IFT140-202ENST00000397417 PPP6R1Q9UPN7 881 aa13.66□□□□□ -0.22
IFT140-202ENST00000397417 ATP5J2-PTCD1G3V325 749 aa13.66□□□□□ -0.22
IFT140-202ENST00000397417 RIMS2Q9UQ26 1411 aa13.66□□□□□ -0.22
IFT140-202ENST00000397417 GNAI2P04899 355 aa13.66□□□□□ -0.22
IFT140-202ENST00000397417 MCTP1Q6DN14 999 aa13.66□□□□□ -0.22
IFT140-202ENST00000397417 CLASRPQ8N2M8 674 aaKnown RBP13.66□□□□□ -0.22
IFT140-202ENST00000397417 GBP4Q96PP9 640 aa13.66□□□□□ -0.22
IFT140-202ENST00000397417 SHROOM2Q13796 1616 aa13.65□□□□□ -0.22
IFT140-202ENST00000397417 UHRF1BP1LA0JNW5 1464 aa13.65□□□□□ -0.22
IFT140-202ENST00000397417 EIF4A2Q14240 407 aaKnown RBP13.65□□□□□ -0.22
IFT140-202ENST00000397417 LARP6Q9BRS8 491 aaKnown RBP13.65□□□□□ -0.22
IFT140-202ENST00000397417 A0A1W2PP64 1363 aa13.65□□□□□ -0.22
IFT140-202ENST00000397417 HDAC5Q9UQL6 1122 aa13.65□□□□□ -0.22
IFT140-202ENST00000397417 PCDHB15Q9Y5E8 787 aa13.65□□□□□ -0.22
IFT140-202ENST00000397417 VPS37DQ86XT2 251 aa13.64□□□□□ -0.23
IFT140-202ENST00000397417 UGGT1Q9NYU2 1555 aa13.64□□□□□ -0.23
IFT140-202ENST00000397417 ZBTB3Q9H5J0 574 aa13.64□□□□□ -0.23
IFT140-202ENST00000397417 DDX49Q9Y6V7 483 aaKnown RBP13.64□□□□□ -0.23
IFT140-202ENST00000397417 FSD1Q9BTV5 496 aa13.64□□□□□ -0.23
IFT140-202ENST00000397417 VPS37CA5D8V6 355 aaPredicted RBP13.63□□□□□ -0.23
IFT140-202ENST00000397417 GNAI3P08754 354 aa13.63□□□□□ -0.23
IFT140-202ENST00000397417 NEK4P51957 841 aa13.63□□□□□ -0.23
IFT140-202ENST00000397417 NAP1L5Q96NT1 182 aaPredicted RBP13.63□□□□□ -0.23
IFT140-202ENST00000397417 PHF23Q9BUL5 403 aaPredicted RBP13.63□□□□□ -0.23
IFT140-202ENST00000397417 GPTP24298 496 aa13.63□□□□□ -0.23
IFT140-202ENST00000397417 CREBRFQ8IUR6 639 aa13.63□□□□□ -0.23
IFT140-202ENST00000397417 PPP1R1BQ9UD71 204 aaPredicted RBP13.63□□□□□ -0.23
IFT140-202ENST00000397417 PPIP5K1Q6PFW1 1433 aa13.63□□□□□ -0.23
IFT140-202ENST00000397417 ANKRD24Q8TF21 1146 aa13.62□□□□□ -0.23
IFT140-202ENST00000397417 CHD1LQ86WJ1 897 aa13.62□□□□□ -0.23
IFT140-202ENST00000397417 PPFIA3O75145 1194 aa13.61□□□□□ -0.23
IFT140-202ENST00000397417 REC8O95072 547 aa13.61□□□□□ -0.23
IFT140-202ENST00000397417 CCDC27Q2M243 656 aa13.61□□□□□ -0.23
IFT140-202ENST00000397417 DRC7Q8IY82 874 aa13.61□□□□□ -0.23
IFT140-202ENST00000397417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.61□□□□□ -0.23
IFT140-202ENST00000397417 MTHFSDQ2M296 383 aaKnown RBP13.61□□□□□ -0.23
IFT140-202ENST00000397417 UPF3BQ9BZI7 483 aaKnown RBP13.61□□□□□ -0.23
IFT140-202ENST00000397417 WWC3Q9ULE0 1092 aa13.61□□□□□ -0.23
IFT140-202ENST00000397417 LRRFIP2Q9Y608 721 aaKnown RBP13.61□□□□□ -0.23
IFT140-202ENST00000397417 PI4KAP2A4QPH2 592 aa13.6□□□□□ -0.23
IFT140-202ENST00000397417 NFKBIBQ15653 356 aa13.6□□□□□ -0.23
IFT140-202ENST00000397417 PI4KAP1Q8N8J0 262 aa13.6□□□□□ -0.23
IFT140-202ENST00000397417 SPG7Q9UQ90 795 aa13.6□□□□□ -0.23
IFT140-202ENST00000397417 MAP3K19Q56UN5 1328 aa13.6□□□□□ -0.23
IFT140-202ENST00000397417 INTS3Q68E01 1043 aaKnown RBP13.6□□□□□ -0.23
IFT140-202ENST00000397417 MEIS3Q99687 375 aa13.6□□□□□ -0.23
IFT140-202ENST00000397417 CLASP1Q7Z460 1538 aa13.6□□□□□ -0.23
IFT140-202ENST00000397417 CWC27Q6UX04 472 aaKnown RBP13.6□□□□□ -0.23
IFT140-202ENST00000397417 ACSBG1Q96GR2 724 aa13.6□□□□□ -0.23
IFT140-202ENST00000397417 EYA1Q99502 592 aa13.6□□□□□ -0.23
IFT140-202ENST00000397417 FKBP4Q02790 459 aaKnown RBP eCLIP13.59□□□□□ -0.23
IFT140-202ENST00000397417 KCNH5Q8NCM2 988 aa13.59□□□□□ -0.23
IFT140-202ENST00000397417 MYD88Q99836 296 aa13.59□□□□□ -0.23
IFT140-202ENST00000397417 CCDC8Q9H0W5 538 aaPredicted RBP13.59□□□□□ -0.23
IFT140-202ENST00000397417 CDC45O75419 566 aa13.59□□□□□ -0.23
IFT140-202ENST00000397417 STK3Q13188 491 aa13.59□□□□□ -0.23
IFT140-202ENST00000397417 AACSQ86V21 672 aa13.59□□□□□ -0.23
IFT140-202ENST00000397417 ZKSCAN1P17029 563 aaPredicted RBP13.58□□□□□ -0.24
IFT140-202ENST00000397417 NPATQ14207 1427 aa13.58□□□□□ -0.24
IFT140-202ENST00000397417 FLIIQ13045 1269 aa13.58□□□□□ -0.24
IFT140-202ENST00000397417 NGLY1Q96IV0 654 aa13.58□□□□□ -0.24
IFT140-202ENST00000397417 C16orf71Q8IYS4 520 aaPredicted RBP13.58□□□□□ -0.24
IFT140-202ENST00000397417 ANKRD36BQ8N2N9 1353 aa13.58□□□□□ -0.24
IFT140-202ENST00000397417 DTNBO60941 627 aa13.57□□□□□ -0.24
IFT140-202ENST00000397417 MPNDQ8N594 471 aa13.57□□□□□ -0.24
IFT140-202ENST00000397417 FAM184AQ8NB25 1140 aa13.57□□□□□ -0.24
IFT140-202ENST00000397417 CFAP44Q96MT7 982 aa13.57□□□□□ -0.24
IFT140-202ENST00000397417 LRRCC1Q9C099 1032 aa13.57□□□□□ -0.24
IFT140-202ENST00000397417 H3BQV1 296 aa13.57□□□□□ -0.24
IFT140-202ENST00000397417 IFFO2Q5TF58 517 aa13.57□□□□□ -0.24
IFT140-202ENST00000397417 TMX4Q9H1E5 349 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms