RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 OFD1O75665 1012 aa11.34□□□□□ -0.59
CAPN3-206ENST00000397163 BAG4O95429 457 aaKnown RBP11.34□□□□□ -0.59
CAPN3-206ENST00000397163 ZSCAN30Q86W11 494 aa11.34□□□□□ -0.59
CAPN3-206ENST00000397163 JARID2Q92833 1246 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-206ENST00000397163 STK26Q9P289 416 aa11.34□□□□□ -0.59
CAPN3-206ENST00000397163 USP32Q8NFA0 1604 aa11.34□□□□□ -0.59
CAPN3-206ENST00000397163 A0A1W2PP64 1363 aa11.33□□□□□ -0.6
CAPN3-206ENST00000397163 ADGRB3O60242 1522 aa11.33□□□□□ -0.6
CAPN3-206ENST00000397163 ZBTB7BO15156 539 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-206ENST00000397163 KLHL40Q2TBA0 621 aa11.33□□□□□ -0.6
CAPN3-206ENST00000397163 ADGRB1O14514 1584 aa11.33□□□□□ -0.6
CAPN3-206ENST00000397163 CDC45O75419 566 aa11.33□□□□□ -0.6
CAPN3-206ENST00000397163 PPP1R9BQ96SB3 815 aa11.33□□□□□ -0.6
CAPN3-206ENST00000397163 PPIP5K1Q6PFW1 1433 aa11.33□□□□□ -0.6
CAPN3-206ENST00000397163 DIP2CQ9Y2E4 1556 aa11.33□□□□□ -0.6
CAPN3-206ENST00000397163 IFT172Q9UG01 1749 aa11.33□□□□□ -0.6
CAPN3-206ENST00000397163 RPGRIP1LQ68CZ1 1315 aa11.33□□□□□ -0.6
CAPN3-206ENST00000397163 MROH1Q8NDA8 1641 aa11.33□□□□□ -0.6
CAPN3-206ENST00000397163 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-206ENST00000397163 ELL2O00472 640 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-206ENST00000397163 MCTP1Q6DN14 999 aa11.32□□□□□ -0.6
CAPN3-206ENST00000397163 FYB1O15117 783 aa11.31□□□□□ -0.6
CAPN3-206ENST00000397163 PDE4CQ08493 712 aa11.31□□□□□ -0.6
CAPN3-206ENST00000397163 TERF2IPQ9NYB0 399 aa11.31□□□□□ -0.6
CAPN3-206ENST00000397163 ARHGEF40Q8TER5 1519 aa11.31□□□□□ -0.6
CAPN3-206ENST00000397163 VGFO15240 615 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-206ENST00000397163 AGLP35573 1532 aa11.31□□□□□ -0.6
CAPN3-206ENST00000397163 TULP4Q9NRJ4 1543 aa11.31□□□□□ -0.6
CAPN3-206ENST00000397163 PRKAR2BP31323 418 aa11.31□□□□□ -0.6
CAPN3-206ENST00000397163 CAVIN1Q6NZI2 390 aaKnown RBP11.31□□□□□ -0.6
CAPN3-206ENST00000397163 ZNF428Q96B54 188 aa11.31□□□□□ -0.6
CAPN3-206ENST00000397163 TSC1Q92574 1164 aa11.3□□□□□ -0.6
CAPN3-206ENST00000397163 THUMPD2Q9BTF0 503 aaKnown RBP11.3□□□□□ -0.6
CAPN3-206ENST00000397163 RABEP1Q15276 862 aa11.3□□□□□ -0.6
CAPN3-206ENST00000397163 MRPL50Q8N5N7 158 aaKnown RBP11.3□□□□□ -0.6
CAPN3-206ENST00000397163 NPATQ14207 1427 aa11.3□□□□□ -0.6
CAPN3-206ENST00000397163 ZC3H13Q5T200 1668 aaKnown RBP11.3□□□□□ -0.6
CAPN3-206ENST00000397163 FCHSD2O94868 740 aa11.3□□□□□ -0.6
CAPN3-206ENST00000397163 NUCB2P80303 420 aa11.3□□□□□ -0.6
CAPN3-206ENST00000397163 SIRT2Q8IXJ6 389 aa11.3□□□□□ -0.6
CAPN3-206ENST00000397163 VAMP4O75379 141 aa11.29□□□□□ -0.6
CAPN3-206ENST00000397163 PLPPR3Q6T4P5 718 aa11.29□□□□□ -0.6
CAPN3-206ENST00000397163 CLEC17AQ6ZS10 378 aa11.29□□□□□ -0.6
CAPN3-206ENST00000397163 MINK1Q8N4C8 1332 aaPredicted RBP11.29□□□□□ -0.6
CAPN3-206ENST00000397163 BBXQ8WY36 941 aaPredicted RBP11.29□□□□□ -0.6
CAPN3-206ENST00000397163 YEATS2Q9ULM3 1422 aa11.29□□□□□ -0.6
CAPN3-206ENST00000397163 COL3A1P02461 1466 aaPredicted RBP11.29□□□□□ -0.6
CAPN3-206ENST00000397163 TSPYL6Q8N831 410 aa11.29□□□□□ -0.6
CAPN3-206ENST00000397163 AK9Q5TCS8 1911 aa11.29□□□□□ -0.6
CAPN3-206ENST00000397163 IBTKQ9P2D0 1353 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-206ENST00000397163 BRPF1P55201 1214 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-206ENST00000397163 ARHGAP45Q92619 1136 aa11.28□□□□□ -0.6
CAPN3-206ENST00000397163 GSPT1P15170 499 aaKnown RBP11.28□□□□□ -0.6
CAPN3-206ENST00000397163 HMOX1P09601 288 aa11.28□□□□□ -0.6
CAPN3-206ENST00000397163 ZNF445P59923 1031 aa11.28□□□□□ -0.6
CAPN3-206ENST00000397163 ZSCAN23Q3MJ62 389 aa11.28□□□□□ -0.6
CAPN3-206ENST00000397163 HDGFL2Q7Z4V5 671 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-206ENST00000397163 MPNDQ8N594 471 aa11.28□□□□□ -0.6
CAPN3-206ENST00000397163 BCL11BQ9C0K0 894 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-206ENST00000397163 MED14O60244 1454 aa11.27□□□□□ -0.6
CAPN3-206ENST00000397163 FAM177BA6PVY3 158 aa11.27□□□□□ -0.61
CAPN3-206ENST00000397163 SMAP1Q8IYB5 467 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-206ENST00000397163 LMTK2Q8IWU2 1503 aa11.27□□□□□ -0.61
CAPN3-206ENST00000397163 CFAP65Q6ZU64 1925 aaKnown RBP11.27□□□□□ -0.61
CAPN3-206ENST00000397163 FBLN1P23142 703 aa11.26□□□□□ -0.61
CAPN3-206ENST00000397163 PLEKHM2Q8IWE5 1019 aa11.26□□□□□ -0.61
CAPN3-206ENST00000397163 CFAP44Q96MT7 982 aa11.26□□□□□ -0.61
CAPN3-206ENST00000397163 GNAI1P63096 354 aa11.26□□□□□ -0.61
CAPN3-206ENST00000397163 PKP1Q13835 747 aa11.26□□□□□ -0.61
CAPN3-206ENST00000397163 NFE2L2Q16236 605 aa11.26□□□□□ -0.61
CAPN3-206ENST00000397163 LMBRD1Q9NUN5 540 aa11.26□□□□□ -0.61
CAPN3-206ENST00000397163 ATAD2Q6PL18 1390 aa11.26□□□□□ -0.61
CAPN3-206ENST00000397163 PRPF40AO75400 957 aaKnown RBP11.26□□□□□ -0.61
CAPN3-206ENST00000397163 CBX1P83916 185 aa11.26□□□□□ -0.61
CAPN3-206ENST00000397163 PHACTR3Q96KR7 559 aa11.26□□□□□ -0.61
CAPN3-206ENST00000397163 API5Q9BZZ5 524 aaKnown RBP11.26□□□□□ -0.61
CAPN3-206ENST00000397163 RBSNQ9H1K0 784 aa11.26□□□□□ -0.61
CAPN3-206ENST00000397163 TWISTNBQ3B726 338 aaPredicted RBP11.25□□□□□ -0.61
CAPN3-206ENST00000397163 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.25□□□□□ -0.61
CAPN3-206ENST00000397163 PPLO60437 1756 aa11.25□□□□□ -0.61
CAPN3-206ENST00000397163 ABCC4O15439 1325 aa11.25□□□□□ -0.61
CAPN3-206ENST00000397163 IGSF3O75054 1194 aa11.25□□□□□ -0.61
CAPN3-206ENST00000397163 PRIM1P49642 420 aaKnown RBP11.25□□□□□ -0.61
CAPN3-206ENST00000397163 TTC22Q5TAA0 569 aa11.25□□□□□ -0.61
CAPN3-206ENST00000397163 INTS3Q68E01 1043 aaKnown RBP11.25□□□□□ -0.61
CAPN3-206ENST00000397163 PRAM1Q96QH2 718 aa11.25□□□□□ -0.61
CAPN3-206ENST00000397163 USP26Q9BXU7 913 aa11.25□□□□□ -0.61
CAPN3-206ENST00000397163 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.25□□□□□ -0.61
CAPN3-206ENST00000397163 PTCH1Q13635 1447 aa11.25□□□□□ -0.61
CAPN3-206ENST00000397163 ST18O60284 1047 aa11.24□□□□□ -0.61
CAPN3-206ENST00000397163 C16orf71Q8IYS4 520 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-206ENST00000397163 MBIPQ9NS73 344 aa11.24□□□□□ -0.61
CAPN3-206ENST00000397163 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
CAPN3-206ENST00000397163 PIK3R4Q99570 1358 aa11.24□□□□□ -0.61
CAPN3-206ENST00000397163 PNPLA6Q8IY17 1366 aa11.24□□□□□ -0.61
CAPN3-206ENST00000397163 APBB1O00213 710 aa11.24□□□□□ -0.61
CAPN3-206ENST00000397163 CASC1Q6TDU7 716 aa11.24□□□□□ -0.61
CAPN3-206ENST00000397163 MAP7D2Q96T17 732 aa11.24□□□□□ -0.61
CAPN3-206ENST00000397163 CWC22Q9HCG8 908 aaKnown RBP11.24□□□□□ -0.61
CAPN3-206ENST00000397163 IFT57Q9NWB7 429 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms