RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 HAP1P54257 671 aaPredicted RBP7.79□□□□□ -1.16
RAPGEF4-203ENST00000397087 BCL11AQ9H165 835 aa7.79□□□□□ -1.16
RAPGEF4-203ENST00000397087 SLC12A5Q9H2X9 1139 aa7.79□□□□□ -1.16
RAPGEF4-203ENST00000397087 ROBO2Q9HCK4 1378 aa7.79□□□□□ -1.16
RAPGEF4-203ENST00000397087 ZNF853P0CG23 659 aa7.79□□□□□ -1.16
RAPGEF4-203ENST00000397087 PKD1L3Q7Z443 1732 aa7.78□□□□□ -1.16
RAPGEF4-203ENST00000397087 HTATSF1O43719 755 aaKnown RBP7.78□□□□□ -1.16
RAPGEF4-203ENST00000397087 PMFBP1Q8TBY8 1022 aa7.78□□□□□ -1.16
RAPGEF4-203ENST00000397087 BACH2Q9BYV9 841 aa7.78□□□□□ -1.16
RAPGEF4-203ENST00000397087 RSPH6AQ9H0K4 717 aa7.77□□□□□ -1.17
RAPGEF4-203ENST00000397087 CCDC61Q9Y6R9 512 aa7.77□□□□□ -1.17
RAPGEF4-203ENST00000397087 SBNO1A3KN83 1393 aa7.77□□□□□ -1.17
RAPGEF4-203ENST00000397087 RARSP54136 660 aaKnown RBP7.77□□□□□ -1.17
RAPGEF4-203ENST00000397087 IFT57Q9NWB7 429 aa7.77□□□□□ -1.17
RAPGEF4-203ENST00000397087 MTHFSP49914 203 aa7.77□□□□□ -1.17
RAPGEF4-203ENST00000397087 HDAC1Q13547 482 aaPredicted RBP7.77□□□□□ -1.17
RAPGEF4-203ENST00000397087 DDRGK1Q96HY6 314 aa7.76□□□□□ -1.17
RAPGEF4-203ENST00000397087 IL13P35225 146 aa7.76□□□□□ -1.17
RAPGEF4-203ENST00000397087 FBXO31Q5XUX0 539 aaPredicted RBP7.76□□□□□ -1.17
RAPGEF4-203ENST00000397087 DIAPH1O60610 1272 aaKnown RBP7.76□□□□□ -1.17
RAPGEF4-203ENST00000397087 TMEM132EQ6IEE7 984 aa7.76□□□□□ -1.17
RAPGEF4-203ENST00000397087 TCP11L2Q8N4U5 519 aa7.76□□□□□ -1.17
RAPGEF4-203ENST00000397087 EXOC6Q8TAG9 804 aa7.76□□□□□ -1.17
RAPGEF4-203ENST00000397087 CDCA7LQ96GN5 454 aa7.76□□□□□ -1.17
RAPGEF4-203ENST00000397087 CICQ96RK0 1608 aaPredicted RBP7.75□□□□□ -1.17
RAPGEF4-203ENST00000397087 COL18A1P39060 1754 aa7.75□□□□□ -1.17
RAPGEF4-203ENST00000397087 APAF1O14727 1248 aa7.75□□□□□ -1.17
RAPGEF4-203ENST00000397087 TMPOP42166 694 aaKnown RBP7.75□□□□□ -1.17
RAPGEF4-203ENST00000397087 TRIM35Q9UPQ4 493 aa7.75□□□□□ -1.17
RAPGEF4-203ENST00000397087 PAPPAQ13219 1627 aa7.75□□□□□ -1.17
RAPGEF4-203ENST00000397087 LAMB4A4D0S4 1761 aa7.75□□□□□ -1.17
RAPGEF4-203ENST00000397087 THEMISQ8N1K5 641 aaPredicted RBP7.75□□□□□ -1.17
RAPGEF4-203ENST00000397087 POGKQ9P215 609 aa7.75□□□□□ -1.17
RAPGEF4-203ENST00000397087 CFAP44Q96MT7 982 aa7.75□□□□□ -1.17
RAPGEF4-203ENST00000397087 CRBNQ96SW2 442 aa7.75□□□□□ -1.17
RAPGEF4-203ENST00000397087 NFE2L2Q16236 605 aa7.74□□□□□ -1.17
RAPGEF4-203ENST00000397087 USP35Q9P2H5 1018 aa7.74□□□□□ -1.17
RAPGEF4-203ENST00000397087 MRC1P22897 1456 aa7.74□□□□□ -1.17
RAPGEF4-203ENST00000397087 IPO9Q96P70 1041 aaKnown RBP7.74□□□□□ -1.17
RAPGEF4-203ENST00000397087 CABP2Q9NPB3 220 aa7.74□□□□□ -1.17
RAPGEF4-203ENST00000397087 POLKQ9UBT6 870 aa7.74□□□□□ -1.17
RAPGEF4-203ENST00000397087 ABCA3Q99758 1704 aa7.73□□□□□ -1.17
RAPGEF4-203ENST00000397087 FLT4P35916 1363 aa7.73□□□□□ -1.17
RAPGEF4-203ENST00000397087 CLUAP1Q96AJ1 413 aa7.73□□□□□ -1.17
RAPGEF4-203ENST00000397087 NUDT16Q96DE0 195 aaKnown RBP7.73□□□□□ -1.17
RAPGEF4-203ENST00000397087 CRB1P82279 1406 aa7.73□□□□□ -1.17
RAPGEF4-203ENST00000397087 EID1Q9Y6B2 187 aa7.73□□□□□ -1.17
RAPGEF4-203ENST00000397087 PLCH1Q4KWH8 1693 aa7.73□□□□□ -1.17
RAPGEF4-203ENST00000397087 CHGAP10645 457 aaKnown RBP7.72□□□□□ -1.17
RAPGEF4-203ENST00000397087 SRPK2P78362 688 aaKnown RBP7.72□□□□□ -1.17
RAPGEF4-203ENST00000397087 ABCC4O15439 1325 aa7.72□□□□□ -1.17
RAPGEF4-203ENST00000397087 PRR36Q9H6K5 1346 aa7.72□□□□□ -1.17
RAPGEF4-203ENST00000397087 RTL5Q5HYW3 569 aaPredicted RBP7.72□□□□□ -1.17
RAPGEF4-203ENST00000397087 IPO8O15397 1037 aaKnown RBP7.72□□□□□ -1.17
RAPGEF4-203ENST00000397087 FAM161AQ3B820 660 aa7.72□□□□□ -1.17
RAPGEF4-203ENST00000397087 SCN11AQ9UI33 1791 aa7.72□□□□□ -1.17
RAPGEF4-203ENST00000397087 XIRP1Q702N8 1843 aaKnown RBP7.72□□□□□ -1.17
RAPGEF4-203ENST00000397087 GNAI1P63096 354 aa7.71□□□□□ -1.17
RAPGEF4-203ENST00000397087 MVPQ14764 893 aaKnown RBP7.71□□□□□ -1.17
RAPGEF4-203ENST00000397087 DSG3P32926 999 aa7.71□□□□□ -1.17
RAPGEF4-203ENST00000397087 ESF1Q9H501 851 aaKnown RBP7.71□□□□□ -1.17
RAPGEF4-203ENST00000397087 DDX19BQ9UMR2 479 aa7.71□□□□□ -1.18
RAPGEF4-203ENST00000397087 MSH6P52701 1360 aa7.71□□□□□ -1.18
RAPGEF4-203ENST00000397087 IGSF1Q8N6C5 1336 aa7.71□□□□□ -1.18
RAPGEF4-203ENST00000397087 ZKSCAN2Q63HK3 967 aa7.71□□□□□ -1.18
RAPGEF4-203ENST00000397087 CHMP4AQ9BY43 222 aa7.71□□□□□ -1.18
RAPGEF4-203ENST00000397087 WNK3Q9BYP7 1800 aa7.7□□□□□ -1.18
RAPGEF4-203ENST00000397087 CABP1Q9NZU7 370 aa7.7□□□□□ -1.18
RAPGEF4-203ENST00000397087 NPHP4O75161 1426 aaPredicted RBP7.7□□□□□ -1.18
RAPGEF4-203ENST00000397087 UBR2Q8IWV8 1755 aa7.7□□□□□ -1.18
RAPGEF4-203ENST00000397087 PDE4AP27815 886 aa7.7□□□□□ -1.18
RAPGEF4-203ENST00000397087 ANP32AP39687 249 aaKnown RBP7.7□□□□□ -1.18
RAPGEF4-203ENST00000397087 RGS12O14924 1447 aa7.7□□□□□ -1.18
RAPGEF4-203ENST00000397087 COG3Q96JB2 828 aa7.7□□□□□ -1.18
RAPGEF4-203ENST00000397087 DAXXQ9UER7 740 aaPredicted RBP7.69□□□□□ -1.18
RAPGEF4-203ENST00000397087 STAG3Q9UJ98 1225 aa7.69□□□□□ -1.18
RAPGEF4-203ENST00000397087 NHSL1Q5SYE7 1610 aa7.69□□□□□ -1.18
RAPGEF4-203ENST00000397087 PTPRCP08575 1304 aa7.69□□□□□ -1.18
RAPGEF4-203ENST00000397087 SMC5Q8IY18 1101 aa7.69□□□□□ -1.18
RAPGEF4-203ENST00000397087 RWDD1Q9H446 243 aaPredicted RBP7.69□□□□□ -1.18
RAPGEF4-203ENST00000397087 LAS1LQ9Y4W2 734 aaKnown RBP7.69□□□□□ -1.18
RAPGEF4-203ENST00000397087 MINK1Q8N4C8 1332 aaPredicted RBP7.69□□□□□ -1.18
RAPGEF4-203ENST00000397087 STRCP1A6NGW2 1772 aa7.69□□□□□ -1.18
RAPGEF4-203ENST00000397087 USP19O94966 1318 aa7.69□□□□□ -1.18
RAPGEF4-203ENST00000397087 C8orf34Q49A92 452 aa7.68□□□□□ -1.18
RAPGEF4-203ENST00000397087 COL22A1Q8NFW1 1626 aaPredicted RBP7.68□□□□□ -1.18
RAPGEF4-203ENST00000397087 EPB41L2O43491 1005 aaKnown RBP7.68□□□□□ -1.18
RAPGEF4-203ENST00000397087 NOP58Q9Y2X3 529 aaKnown RBP7.68□□□□□ -1.18
RAPGEF4-203ENST00000397087 LRP6O75581 1613 aa7.68□□□□□ -1.18
RAPGEF4-203ENST00000397087 HOXB7P09629 217 aa7.67□□□□□ -1.18
RAPGEF4-203ENST00000397087 TNNT2P45379 298 aaPredicted RBP7.67□□□□□ -1.18
RAPGEF4-203ENST00000397087 ATF7IPQ6VMQ6 1270 aa7.67□□□□□ -1.18
RAPGEF4-203ENST00000397087 LTKP29376 864 aa7.67□□□□□ -1.18
RAPGEF4-203ENST00000397087 IL17RAQ96F46 866 aa7.67□□□□□ -1.18
RAPGEF4-203ENST00000397087 RTN4Q9NQC3 1192 aaKnown RBP7.67□□□□□ -1.18
RAPGEF4-203ENST00000397087 ZNF831Q5JPB2 1677 aa7.67□□□□□ -1.18
RAPGEF4-203ENST00000397087 CEMIPQ8WUJ3 1361 aa7.67□□□□□ -1.18
RAPGEF4-203ENST00000397087 ATP10DQ9P241 1426 aa7.67□□□□□ -1.18
RAPGEF4-203ENST00000397087 NEFMP07197 916 aa7.67□□□□□ -1.18
RAPGEF4-203ENST00000397087 DZIP1LQ8IYY4 767 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms