RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 HOXC9P31274 260 aa16.83■□□□□ 0.29
TRIM39-204ENST00000396548 KCNH5Q8NCM2 988 aa16.83■□□□□ 0.29
TRIM39-204ENST00000396548 ROBO1Q9Y6N7 1651 aa16.83■□□□□ 0.29
TRIM39-204ENST00000396548 CCDC27Q2M243 656 aa16.83■□□□□ 0.28
TRIM39-204ENST00000396548 SALL2Q9Y467 1007 aaPredicted RBP16.83■□□□□ 0.28
TRIM39-204ENST00000396548 CAMTA1Q9Y6Y1 1673 aa16.83■□□□□ 0.28
TRIM39-204ENST00000396548 TRMT2AQ8IZ69 625 aaKnown RBP16.83■□□□□ 0.28
TRIM39-204ENST00000396548 CDCA7LQ96GN5 454 aa16.82■□□□□ 0.28
TRIM39-204ENST00000396548 SOX12O15370 315 aa16.82■□□□□ 0.28
TRIM39-204ENST00000396548 ARHGEF10O15013 1369 aa16.82■□□□□ 0.28
TRIM39-204ENST00000396548 DLG5Q8TDM6 1919 aa16.82■□□□□ 0.28
TRIM39-204ENST00000396548 GCP02774 474 aa16.81■□□□□ 0.28
TRIM39-204ENST00000396548 AHDC1Q5TGY3 1603 aaPredicted RBP16.81■□□□□ 0.28
TRIM39-204ENST00000396548 RGPD5Q99666 1765 aa16.81■□□□□ 0.28
TRIM39-204ENST00000396548 ARHGEF25Q86VW2 580 aa16.81■□□□□ 0.28
TRIM39-204ENST00000396548 KDRP35968 1356 aa16.81■□□□□ 0.28
TRIM39-204ENST00000396548 ABCC6O95255 1503 aa16.8■□□□□ 0.28
TRIM39-204ENST00000396548 WWC1Q8IX03 1113 aa16.8■□□□□ 0.28
TRIM39-204ENST00000396548 RGPD2P0DJD1 1756 aa16.8■□□□□ 0.28
TRIM39-204ENST00000396548 IP6K1Q92551 441 aa16.8■□□□□ 0.28
TRIM39-204ENST00000396548 LMO7Q8WWI1 1683 aa16.8■□□□□ 0.28
TRIM39-204ENST00000396548 GTF3C3Q9Y5Q9 886 aa16.79■□□□□ 0.28
TRIM39-204ENST00000396548 IGSF1Q8N6C5 1336 aa16.79■□□□□ 0.28
TRIM39-204ENST00000396548 PNNQ9H307 717 aaKnown RBP16.79■□□□□ 0.28
TRIM39-204ENST00000396548 TMPOP42166 694 aaKnown RBP16.78■□□□□ 0.28
TRIM39-204ENST00000396548 AMPHP49418 695 aa16.78■□□□□ 0.28
TRIM39-204ENST00000396548 SPINK5Q9NQ38 1064 aaPredicted RBP16.78■□□□□ 0.28
TRIM39-204ENST00000396548 NCAPD2Q15021 1401 aa16.78■□□□□ 0.28
TRIM39-204ENST00000396548 PRKAR2BP31323 418 aa16.78■□□□□ 0.28
TRIM39-204ENST00000396548 SLFN5Q08AF3 891 aa16.78■□□□□ 0.28
TRIM39-204ENST00000396548 PHACTR3Q96KR7 559 aa16.78■□□□□ 0.28
TRIM39-204ENST00000396548 HMOX1P09601 288 aa16.77■□□□□ 0.28
TRIM39-204ENST00000396548 TRIM35Q9UPQ4 493 aa16.77■□□□□ 0.28
TRIM39-204ENST00000396548 DUSP27Q5VZP5 1158 aa16.77■□□□□ 0.28
TRIM39-204ENST00000396548 RRP7AQ9Y3A4 280 aaKnown RBP16.77■□□□□ 0.27
TRIM39-204ENST00000396548 RNF123Q5XPI4 1314 aa16.76■□□□□ 0.27
TRIM39-204ENST00000396548 COL22A1Q8NFW1 1626 aaPredicted RBP16.76■□□□□ 0.27
TRIM39-204ENST00000396548 GOLGA2Q08379 1002 aa16.76■□□□□ 0.27
TRIM39-204ENST00000396548 AEBP1Q8IUX7 1158 aa16.76■□□□□ 0.27
TRIM39-204ENST00000396548 EYA1Q99502 592 aa16.75■□□□□ 0.27
TRIM39-204ENST00000396548 WDR63Q8IWG1 891 aa16.75■□□□□ 0.27
TRIM39-204ENST00000396548 CPDO75976 1380 aa16.75■□□□□ 0.27
TRIM39-204ENST00000396548 SULT6B1Q6IMI4 303 aa16.73■□□□□ 0.27
TRIM39-204ENST00000396548 MAPK8IP3Q9UPT6 1336 aa16.73■□□□□ 0.27
TRIM39-204ENST00000396548 LMOD2Q6P5Q4 547 aa16.73■□□□□ 0.27
TRIM39-204ENST00000396548 FAM208AQ9UK61 1670 aaKnown RBP16.73■□□□□ 0.27
TRIM39-204ENST00000396548 AXIN2Q9Y2T1 843 aa16.73■□□□□ 0.27
TRIM39-204ENST00000396548 SUPT16HQ9Y5B9 1047 aaKnown RBP16.73■□□□□ 0.27
TRIM39-204ENST00000396548 NFE2L2Q16236 605 aa16.72■□□□□ 0.27
TRIM39-204ENST00000396548 COL16A1Q07092 1604 aaPredicted RBP16.72■□□□□ 0.27
TRIM39-204ENST00000396548 E9PSI1 815 aa16.71■□□□□ 0.27
TRIM39-204ENST00000396548 NEUROD2Q15784 382 aa16.71■□□□□ 0.27
TRIM39-204ENST00000396548 RIPK4P57078 832 aa16.7■□□□□ 0.26
TRIM39-204ENST00000396548 CABLES1Q8TDN4 633 aa16.7■□□□□ 0.26
TRIM39-204ENST00000396548 PHLPP1O60346 1717 aa16.7■□□□□ 0.26
TRIM39-204ENST00000396548 IL16Q14005 1332 aa16.69■□□□□ 0.26
TRIM39-204ENST00000396548 NBPF6Q5VWK0 638 aa16.68■□□□□ 0.26
TRIM39-204ENST00000396548 NBPF4Q96M43 638 aa16.68■□□□□ 0.26
TRIM39-204ENST00000396548 LRRC37A3O60309 1634 aa16.68■□□□□ 0.26
TRIM39-204ENST00000396548 ZC3H6P61129 1189 aaKnown RBP16.67■□□□□ 0.26
TRIM39-204ENST00000396548 KIAA0232Q92628 1395 aa16.67■□□□□ 0.26
TRIM39-204ENST00000396548 ERBB3P21860 1342 aa16.66■□□□□ 0.26
TRIM39-204ENST00000396548 ANKRD24Q8TF21 1146 aa16.66■□□□□ 0.26
TRIM39-204ENST00000396548 RCAN3Q9UKA8 241 aa16.65■□□□□ 0.26
TRIM39-204ENST00000396548 LTV1Q96GA3 475 aaPredicted RBP16.65■□□□□ 0.26
TRIM39-204ENST00000396548 MTHFSDQ2M296 383 aaKnown RBP16.64■□□□□ 0.25
TRIM39-204ENST00000396548 LRRC59Q96AG4 307 aaKnown RBP16.64■□□□□ 0.25
TRIM39-204ENST00000396548 PLEKHG5O94827 1062 aa16.63■□□□□ 0.25
TRIM39-204ENST00000396548 NEFMP07197 916 aa16.63■□□□□ 0.25
TRIM39-204ENST00000396548 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
TRIM39-204ENST00000396548 ZNF853P0CG23 659 aa16.63■□□□□ 0.25
TRIM39-204ENST00000396548 USHBP1Q8N6Y0 703 aa16.62■□□□□ 0.25
TRIM39-204ENST00000396548 ZBTB7CA1YPR0 619 aa16.62■□□□□ 0.25
TRIM39-204ENST00000396548 VIRMAQ69YN4 1812 aaKnown RBP16.62■□□□□ 0.25
TRIM39-204ENST00000396548 ADAMTS7Q9UKP4 1686 aa16.62■□□□□ 0.25
TRIM39-204ENST00000396548 CRB1P82279 1406 aa16.61■□□□□ 0.25
TRIM39-204ENST00000396548 COL14A1Q05707 1796 aaKnown RBP16.61■□□□□ 0.25
TRIM39-204ENST00000396548 FANCIQ9NVI1 1328 aa16.61■□□□□ 0.25
TRIM39-204ENST00000396548 COL5A2P05997 1499 aaPredicted RBP16.61■□□□□ 0.25
TRIM39-204ENST00000396548 TOM1O60784 492 aa16.61■□□□□ 0.25
TRIM39-204ENST00000396548 PKD1L3Q7Z443 1732 aa16.6■□□□□ 0.25
TRIM39-204ENST00000396548 FAM83GA6ND36 823 aa16.6■□□□□ 0.25
TRIM39-204ENST00000396548 LMOD3Q0VAK6 560 aa16.6■□□□□ 0.25
TRIM39-204ENST00000396548 MYH16Q9H6N6 1097 aa16.6■□□□□ 0.25
TRIM39-204ENST00000396548 PLEKHG2Q9H7P9 1386 aa16.6■□□□□ 0.25
TRIM39-204ENST00000396548 CHRNA2Q15822 529 aa16.6■□□□□ 0.25
TRIM39-204ENST00000396548 FKBP8Q14318 412 aa16.59■□□□□ 0.25
TRIM39-204ENST00000396548 THUMPD2Q9BTF0 503 aaKnown RBP16.59■□□□□ 0.25
TRIM39-204ENST00000396548 RRP1P56182 461 aaKnown RBP16.59■□□□□ 0.25
TRIM39-204ENST00000396548 GAS2L2Q8NHY3 880 aa16.58■□□□□ 0.24
TRIM39-204ENST00000396548 IFT57Q9NWB7 429 aa16.58■□□□□ 0.24
TRIM39-204ENST00000396548 HTATSF1O43719 755 aaKnown RBP16.58■□□□□ 0.24
TRIM39-204ENST00000396548 TSR2Q969E8 191 aaKnown RBP16.57■□□□□ 0.24
TRIM39-204ENST00000396548 DCTN1Q14203 1278 aa16.57■□□□□ 0.24
TRIM39-204ENST00000396548 PLCH1Q4KWH8 1693 aa16.56■□□□□ 0.24
TRIM39-204ENST00000396548 CALD1Q05682 793 aaKnown RBP16.56■□□□□ 0.24
TRIM39-204ENST00000396548 SIPA1L3O60292 1781 aaPredicted RBP16.56■□□□□ 0.24
TRIM39-204ENST00000396548 CFAP44Q96MT7 982 aa16.56■□□□□ 0.24
TRIM39-204ENST00000396548 PARP4Q9UKK3 1724 aaKnown RBP16.56■□□□□ 0.24
TRIM39-204ENST00000396548 MEGF6O75095 1541 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms