RNA–Protein interactions for RNA: ENST00000396384.1

TUBB-207, Transcript of tubulin beta class I, humanhuman

TSL 3 BASIC

Gene TUBB, Length 2,823 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-207ENST00000396384 TBC1D2Q9BYX2 928 aa13.2□□□□□ -0.3
TUBB-207ENST00000396384 GGNBP2Q9H3C7 697 aa13.2□□□□□ -0.3
TUBB-207ENST00000396384 TMPOP42166 694 aaKnown RBP13.19□□□□□ -0.3
TUBB-207ENST00000396384 PLEKHF1Q96S99 279 aa13.19□□□□□ -0.3
TUBB-207ENST00000396384 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.19□□□□□ -0.3
TUBB-207ENST00000396384 TRIM27P14373 513 aa13.18□□□□□ -0.3
TUBB-207ENST00000396384 ITPRIPQ8IWB1 547 aa13.18□□□□□ -0.3
TUBB-207ENST00000396384 SSH1Q8WYL5 1049 aa13.18□□□□□ -0.3
TUBB-207ENST00000396384 TRIM35Q9UPQ4 493 aa13.18□□□□□ -0.3
TUBB-207ENST00000396384 ITSN1Q15811 1721 aa13.18□□□□□ -0.3
TUBB-207ENST00000396384 DDX19BQ9UMR2 479 aa13.17□□□□□ -0.3
TUBB-207ENST00000396384 FYB1O15117 783 aa13.17□□□□□ -0.3
TUBB-207ENST00000396384 ATF7IPQ6VMQ6 1270 aa13.17□□□□□ -0.3
TUBB-207ENST00000396384 NALCNQ8IZF0 1738 aa13.16□□□□□ -0.3
TUBB-207ENST00000396384 RGPD8O14715 1765 aaPredicted RBP13.16□□□□□ -0.3
TUBB-207ENST00000396384 HDAC1Q13547 482 aaPredicted RBP13.16□□□□□ -0.3
TUBB-207ENST00000396384 C14orf37Q86TY3 774 aa13.16□□□□□ -0.3
TUBB-207ENST00000396384 NOB1Q9ULX3 412 aaKnown RBP13.16□□□□□ -0.3
TUBB-207ENST00000396384 CPSF1Q10570 1443 aaKnown RBP13.16□□□□□ -0.3
TUBB-207ENST00000396384 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
TUBB-207ENST00000396384 AKAP12Q02952 1782 aa13.16□□□□□ -0.3
TUBB-207ENST00000396384 RIPK4P57078 832 aa13.15□□□□□ -0.3
TUBB-207ENST00000396384 SPRYD3Q8NCJ5 442 aa13.15□□□□□ -0.3
TUBB-207ENST00000396384 C22orf23Q9BZE7 217 aa13.15□□□□□ -0.3
TUBB-207ENST00000396384 ACEP12821 1306 aa13.15□□□□□ -0.3
TUBB-207ENST00000396384 MFAP1P55081 439 aaKnown RBP13.15□□□□□ -0.3
TUBB-207ENST00000396384 PROSER2Q86WR7 435 aaPredicted RBP13.15□□□□□ -0.3
TUBB-207ENST00000396384 STRCQ7RTU9 1775 aa13.15□□□□□ -0.3
TUBB-207ENST00000396384 CDC42BPGQ6DT37 1551 aa13.15□□□□□ -0.31
TUBB-207ENST00000396384 MON2Q7Z3U7 1717 aa13.14□□□□□ -0.31
TUBB-207ENST00000396384 UBE2Q2Q8WVN8 375 aa13.14□□□□□ -0.31
TUBB-207ENST00000396384 ZRANB1Q9UGI0 708 aa13.14□□□□□ -0.31
TUBB-207ENST00000396384 IL16Q14005 1332 aa13.14□□□□□ -0.31
TUBB-207ENST00000396384 TOPAZ1Q8N9V7 1692 aa13.14□□□□□ -0.31
TUBB-207ENST00000396384 NWD1Q149M9 1564 aa13.13□□□□□ -0.31
TUBB-207ENST00000396384 NME9Q86XW9 330 aa13.13□□□□□ -0.31
TUBB-207ENST00000396384 TMEM57Q8N5G2 664 aa13.13□□□□□ -0.31
TUBB-207ENST00000396384 STRCP1A6NGW2 1772 aa13.13□□□□□ -0.31
TUBB-207ENST00000396384 PLEKHG3A1L390 1219 aa13.12□□□□□ -0.31
TUBB-207ENST00000396384 DIAPH1O60610 1272 aaKnown RBP13.12□□□□□ -0.31
TUBB-207ENST00000396384 IPO8O15397 1037 aaKnown RBP13.12□□□□□ -0.31
TUBB-207ENST00000396384 COL3A1P02461 1466 aaPredicted RBP13.12□□□□□ -0.31
TUBB-207ENST00000396384 FBLN1P23142 703 aa13.12□□□□□ -0.31
TUBB-207ENST00000396384 SMC5Q8IY18 1101 aa13.12□□□□□ -0.31
TUBB-207ENST00000396384 PNNQ9H307 717 aaKnown RBP13.12□□□□□ -0.31
TUBB-207ENST00000396384 ADGRL3Q9HAR2 1447 aa13.12□□□□□ -0.31
TUBB-207ENST00000396384 FMN2Q9NZ56 1722 aa13.12□□□□□ -0.31
TUBB-207ENST00000396384 ZBTB40Q9NUA8 1239 aa13.12□□□□□ -0.31
TUBB-207ENST00000396384 EDC4Q6P2E9 1401 aaKnown RBP13.11□□□□□ -0.31
TUBB-207ENST00000396384 KIF16BQ96L93 1317 aa13.11□□□□□ -0.31
TUBB-207ENST00000396384 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.11□□□□□ -0.31
TUBB-207ENST00000396384 NGDNQ8NEJ9 315 aaKnown RBP13.11□□□□□ -0.31
TUBB-207ENST00000396384 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
TUBB-207ENST00000396384 L1TD1Q5T7N2 865 aaKnown RBP13.1□□□□□ -0.31
TUBB-207ENST00000396384 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
TUBB-207ENST00000396384 TMEM94Q12767 1356 aa13.09□□□□□ -0.31
TUBB-207ENST00000396384 USP6P35125 1406 aa13.09□□□□□ -0.31
TUBB-207ENST00000396384 MCM4P33991 863 aa13.08□□□□□ -0.31
TUBB-207ENST00000396384 CHMP5Q9NZZ3 219 aa13.08□□□□□ -0.31
TUBB-207ENST00000396384 ANKARQ7Z5J8 1434 aa13.08□□□□□ -0.31
TUBB-207ENST00000396384 TTC21BQ7Z4L5 1316 aa13.08□□□□□ -0.32
TUBB-207ENST00000396384 FCHSD2O94868 740 aa13.08□□□□□ -0.32
TUBB-207ENST00000396384 NUCB1Q02818 461 aa13.08□□□□□ -0.32
TUBB-207ENST00000396384 ALDH1L2Q3SY69 923 aa13.08□□□□□ -0.32
TUBB-207ENST00000396384 ZNF335Q9H4Z2 1342 aaPredicted RBP13.08□□□□□ -0.32
TUBB-207ENST00000396384 ESCO1Q5FWF5 840 aa13.08□□□□□ -0.32
TUBB-207ENST00000396384 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
TUBB-207ENST00000396384 HSCBQ8IWL3 235 aa13.07□□□□□ -0.32
TUBB-207ENST00000396384 LNPKQ9C0E8 428 aa13.07□□□□□ -0.32
TUBB-207ENST00000396384 ORAI2Q96SN7 254 aa13.07□□□□□ -0.32
TUBB-207ENST00000396384 NRKQ7Z2Y5 1582 aa13.06□□□□□ -0.32
TUBB-207ENST00000396384 C19orf44Q9H6X5 657 aa13.06□□□□□ -0.32
TUBB-207ENST00000396384 PHF8Q9UPP1 1060 aa13.06□□□□□ -0.32
TUBB-207ENST00000396384 PRKAR2BP31323 418 aa13.06□□□□□ -0.32
TUBB-207ENST00000396384 CHD1LQ86WJ1 897 aa13.06□□□□□ -0.32
TUBB-207ENST00000396384 COG3Q96JB2 828 aa13.05□□□□□ -0.32
TUBB-207ENST00000396384 ARXQ96QS3 562 aa13.05□□□□□ -0.32
TUBB-207ENST00000396384 GZF1Q9H116 711 aaPredicted RBP13.05□□□□□ -0.32
TUBB-207ENST00000396384 GOLGA6L3A6NEY3 463 aa13.04□□□□□ -0.32
TUBB-207ENST00000396384 SSH2Q76I76 1423 aa13.04□□□□□ -0.32
TUBB-207ENST00000396384 RSPH6AQ9H0K4 717 aa13.04□□□□□ -0.32
TUBB-207ENST00000396384 RBM25P49756 843 aaKnown RBP13.04□□□□□ -0.32
TUBB-207ENST00000396384 ZNF428Q96B54 188 aa13.04□□□□□ -0.32
TUBB-207ENST00000396384 SOX12O15370 315 aa13.03□□□□□ -0.32
TUBB-207ENST00000396384 TRAK2O60296 914 aa13.03□□□□□ -0.32
TUBB-207ENST00000396384 XPCQ01831 940 aaPredicted RBP13.03□□□□□ -0.32
TUBB-207ENST00000396384 NUTM2GQ5VZR2 741 aa13.03□□□□□ -0.32
TUBB-207ENST00000396384 POLKQ9UBT6 870 aa13.03□□□□□ -0.32
TUBB-207ENST00000396384 FOXO3O43524 673 aa13.03□□□□□ -0.32
TUBB-207ENST00000396384 ATF3P18847 181 aa13.03□□□□□ -0.32
TUBB-207ENST00000396384 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
TUBB-207ENST00000396384 RRS1Q15050 365 aaKnown RBP13.03□□□□□ -0.32
TUBB-207ENST00000396384 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
TUBB-207ENST00000396384 ZBTB7BO15156 539 aaPredicted RBP13.02□□□□□ -0.33
TUBB-207ENST00000396384 HMOX1P09601 288 aa13.02□□□□□ -0.33
TUBB-207ENST00000396384 ANKRD45Q5TZF3 282 aa13.02□□□□□ -0.33
TUBB-207ENST00000396384 PHACTR3Q96KR7 559 aa13.02□□□□□ -0.33
TUBB-207ENST00000396384 LRRC7Q96NW7 1537 aa13.02□□□□□ -0.33
TUBB-207ENST00000396384 XRCC6P12956 609 aaKnown RBP eCLIP13.02□□□□□ -0.33
TUBB-207ENST00000396384 BMP2KLQ5H9B9 411 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms