RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 TMX4Q9H1E5 349 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-203ENST00000395896 ABCA6Q8N139 1617 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 SENP3Q9H4L4 574 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-203ENST00000395896 KCNJ4P48050 445 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 WAPLQ7Z5K2 1190 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 ERC1Q8IUD2 1116 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 NOP58Q9Y2X3 529 aaKnown RBP4.18□□□□□ -1.74
VPS13C-203ENST00000395896 DLC1Q96QB1 1528 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 CLTCQ00610 1675 aaKnown RBP4.18□□□□□ -1.74
VPS13C-203ENST00000395896 A0A1W2PP64 1363 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 ARHGEF10O15013 1369 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 IPO9Q96P70 1041 aaKnown RBP4.18□□□□□ -1.74
VPS13C-203ENST00000395896 MVPQ14764 893 aaKnown RBP4.18□□□□□ -1.74
VPS13C-203ENST00000395896 ACEP12821 1306 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 ANKARQ7Z5J8 1434 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 ERC2O15083 957 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 KCNA6P17658 529 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 HOXB7P09629 217 aa4.17□□□□□ -1.74
VPS13C-203ENST00000395896 TEX13AQ9BXU3 409 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-203ENST00000395896 NPHP1O15259 732 aa4.17□□□□□ -1.74
VPS13C-203ENST00000395896 HIP1O00291 1037 aa4.17□□□□□ -1.74
VPS13C-203ENST00000395896 GBP4Q96PP9 640 aa4.17□□□□□ -1.74
VPS13C-203ENST00000395896 RTL1A6NKG5 1358 aa4.17□□□□□ -1.74
VPS13C-203ENST00000395896 CLASRPQ8N2M8 674 aaKnown RBP4.17□□□□□ -1.74
VPS13C-203ENST00000395896 DIP2AQ14689 1571 aa4.17□□□□□ -1.74
VPS13C-203ENST00000395896 SBNO1A3KN83 1393 aa4.17□□□□□ -1.74
VPS13C-203ENST00000395896 ZKSCAN1P17029 563 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-203ENST00000395896 RNF20Q5VTR2 975 aa4.17□□□□□ -1.74
VPS13C-203ENST00000395896 MROH2AA6NES4 1674 aa4.17□□□□□ -1.74
VPS13C-203ENST00000395896 NRXN1Q9ULB1 1477 aa4.17□□□□□ -1.74
VPS13C-203ENST00000395896 BLMP54132 1417 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-203ENST00000395896 SPATA31D1Q6ZQQ2 1576 aa4.17□□□□□ -1.74
VPS13C-203ENST00000395896 DUSP27Q5VZP5 1158 aa4.17□□□□□ -1.74
VPS13C-203ENST00000395896 FER1L4A9Z1Z3 1794 aa4.17□□□□□ -1.74
VPS13C-203ENST00000395896 RRP7AQ9Y3A4 280 aaKnown RBP4.17□□□□□ -1.74
VPS13C-203ENST00000395896 TAF7Q15545 349 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-203ENST00000395896 HDGFL1Q5TGJ6 251 aa4.16□□□□□ -1.74
VPS13C-203ENST00000395896 TECPR2O15040 1411 aa4.16□□□□□ -1.74
VPS13C-203ENST00000395896 FGD1P98174 961 aa4.16□□□□□ -1.74
VPS13C-203ENST00000395896 ZRSR1Q15695 479 aaKnown RBP4.16□□□□□ -1.74
VPS13C-203ENST00000395896 COG6Q9Y2V7 657 aa4.16□□□□□ -1.74
VPS13C-203ENST00000395896 USP32Q8NFA0 1604 aa4.16□□□□□ -1.74
VPS13C-203ENST00000395896 SLC4A10Q6U841 1118 aa4.16□□□□□ -1.74
VPS13C-203ENST00000395896 SYAP1Q96A49 352 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-203ENST00000395896 NLRP2Q9NX02 1062 aa4.16□□□□□ -1.74
VPS13C-203ENST00000395896 DBF4Q9UBU7 674 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-203ENST00000395896 A2ML1A8K2U0 1454 aa4.16□□□□□ -1.74
VPS13C-203ENST00000395896 GNAI2P04899 355 aa4.16□□□□□ -1.74
VPS13C-203ENST00000395896 HMOX1P09601 288 aa4.16□□□□□ -1.74
VPS13C-203ENST00000395896 CSPP1Q1MSJ5 1256 aa4.16□□□□□ -1.74
VPS13C-203ENST00000395896 INTS3Q68E01 1043 aaKnown RBP4.16□□□□□ -1.74
VPS13C-203ENST00000395896 UBTFL1P0CB47 393 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-203ENST00000395896 MYO3AQ8NEV4 1616 aa4.16□□□□□ -1.74
VPS13C-203ENST00000395896 NEXMIFQ5QGS0 1516 aa4.16□□□□□ -1.74
VPS13C-203ENST00000395896 PTCH1Q13635 1447 aa4.15□□□□□ -1.74
VPS13C-203ENST00000395896 FOXO3O43524 673 aa4.15□□□□□ -1.74
VPS13C-203ENST00000395896 RARSP54136 660 aaKnown RBP4.15□□□□□ -1.74
VPS13C-203ENST00000395896 LTV1Q96GA3 475 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-203ENST00000395896 POLKQ9UBT6 870 aa4.15□□□□□ -1.74
VPS13C-203ENST00000395896 MFAP1P55081 439 aaKnown RBP4.15□□□□□ -1.74
VPS13C-203ENST00000395896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.15□□□□□ -1.741e-7■■■■□ 22
VPS13C-203ENST00000395896 PDE4AP27815 886 aa4.15□□□□□ -1.75
VPS13C-203ENST00000395896 GORABQ5T7V8 394 aa4.15□□□□□ -1.75
VPS13C-203ENST00000395896 NRDCO43847 1150 aa4.15□□□□□ -1.75
VPS13C-203ENST00000395896 CDCA7Q9BWT1 371 aaPredicted RBP4.15□□□□□ -1.75
VPS13C-203ENST00000395896 CDK12Q9NYV4 1490 aaPredicted RBP4.15□□□□□ -1.75
VPS13C-203ENST00000395896 TAF7LQ5H9L4 462 aa4.15□□□□□ -1.75
VPS13C-203ENST00000395896 A0A0G2JS52 829 aa4.15□□□□□ -1.75
VPS13C-203ENST00000395896 HYPKQ9NX55 129 aa4.15□□□□□ -1.75
VPS13C-203ENST00000395896 STARD3NLO95772 234 aa4.15□□□□□ -1.75
VPS13C-203ENST00000395896 ANKRD45Q5TZF3 282 aa4.15□□□□□ -1.75
VPS13C-203ENST00000395896 CPLX2Q6PUV4 134 aaKnown RBP4.15□□□□□ -1.75
VPS13C-203ENST00000395896 ARXQ96QS3 562 aa4.15□□□□□ -1.75
VPS13C-203ENST00000395896 TMEM131LA2VDJ0 1609 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 TOM1O60784 492 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 CEBPAP49715 358 aaPredicted RBP4.14□□□□□ -1.75
VPS13C-203ENST00000395896 ZNF530Q6P9A1 599 aaPredicted RBP4.14□□□□□ -1.75
VPS13C-203ENST00000395896 BCL2L13Q9BXK5 485 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 ISY1Q9ULR0 285 aaKnown RBP4.14□□□□□ -1.75
VPS13C-203ENST00000395896 GTF2E1P29083 439 aaPredicted RBP4.14□□□□□ -1.75
VPS13C-203ENST00000395896 CARD14Q9BXL6 1004 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 BCL11AQ9H165 835 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 MYO5BQ9ULV0 1848 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 ALKQ9UM73 1620 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 G3BP1Q13283 466 aaKnown RBP eCLIP4.14□□□□□ -1.756e-6■■■□□ 14.8
VPS13C-203ENST00000395896 CRBNQ96SW2 442 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 SLC4A2P04920 1241 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 PDCP20941 246 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 HSP90AB3PQ58FF7 597 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 PLEKHG2Q9H7P9 1386 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 PHF14O94880 888 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 LARP1Q6PKG0 1096 aaKnown RBP4.14□□□□□ -1.75
VPS13C-203ENST00000395896 ARHGEF28Q8N1W1 1705 aaKnown RBP4.14□□□□□ -1.75
VPS13C-203ENST00000395896 RAB11FIP3O75154 756 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 EXOSC9Q06265 439 aaKnown RBP4.14□□□□□ -1.75
VPS13C-203ENST00000395896 IFT172Q9UG01 1749 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 PIK3C2BO00750 1634 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 TRIM44Q96DX7 344 aaPredicted RBP4.14□□□□□ -1.75
VPS13C-203ENST00000395896 CDCA7LQ96GN5 454 aa4.14□□□□□ -1.75
VPS13C-203ENST00000395896 RNF123Q5XPI4 1314 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms