RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 HDAC5Q9UQL6 1122 aa13.91□□□□□ -0.18
RAPGEF3-202ENST00000395358 U2SURPO15042 1029 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-202ENST00000395358 CALCOCO1Q9P1Z2 691 aa13.9□□□□□ -0.18
RAPGEF3-202ENST00000395358 PLEKHG1Q9ULL1 1385 aa13.9□□□□□ -0.18
RAPGEF3-202ENST00000395358 DIAPH3Q9NSV4 1193 aa13.9□□□□□ -0.18
RAPGEF3-202ENST00000395358 KCNA6P17658 529 aa13.9□□□□□ -0.19
RAPGEF3-202ENST00000395358 CAVIN1Q6NZI2 390 aaKnown RBP13.9□□□□□ -0.19
RAPGEF3-202ENST00000395358 TEX2Q8IWB9 1127 aa13.9□□□□□ -0.19
RAPGEF3-202ENST00000395358 TBC1D2Q9BYX2 928 aa13.9□□□□□ -0.19
RAPGEF3-202ENST00000395358 TSPYL1Q9H0U9 437 aa13.9□□□□□ -0.19
RAPGEF3-202ENST00000395358 TMEM51Q9NW97 253 aa13.89□□□□□ -0.19
RAPGEF3-202ENST00000395358 FSD2A1L4K1 749 aa13.89□□□□□ -0.19
RAPGEF3-202ENST00000395358 TESK2Q96S53 571 aa13.89□□□□□ -0.19
RAPGEF3-202ENST00000395358 MYBBP1AQ9BQG0 1328 aaKnown RBP13.89□□□□□ -0.19
RAPGEF3-202ENST00000395358 ZFYVE9O95405 1425 aa13.88□□□□□ -0.19
RAPGEF3-202ENST00000395358 C8orf34Q49A92 452 aa13.88□□□□□ -0.19
RAPGEF3-202ENST00000395358 MROH1Q8NDA8 1641 aa13.88□□□□□ -0.19
RAPGEF3-202ENST00000395358 CLGNO14967 610 aa13.88□□□□□ -0.19
RAPGEF3-202ENST00000395358 GOLGA6L1Q8N7Z2 621 aa13.88□□□□□ -0.19
RAPGEF3-202ENST00000395358 GPATCH11Q8N954 259 aa13.87□□□□□ -0.19
RAPGEF3-202ENST00000395358 PIK3C2GO75747 1445 aa13.87□□□□□ -0.19
RAPGEF3-202ENST00000395358 DISP3Q9P2K9 1392 aa13.87□□□□□ -0.19
RAPGEF3-202ENST00000395358 ADGRB3O60242 1522 aa13.87□□□□□ -0.19
RAPGEF3-202ENST00000395358 ABCC11Q96J66 1382 aa13.87□□□□□ -0.19
RAPGEF3-202ENST00000395358 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.86□□□□□ -0.19
RAPGEF3-202ENST00000395358 FAM177BA6PVY3 158 aa13.86□□□□□ -0.19
RAPGEF3-202ENST00000395358 GGNBP2Q9H3C7 697 aa13.86□□□□□ -0.19
RAPGEF3-202ENST00000395358 PTPRMP28827 1452 aa13.86□□□□□ -0.19
RAPGEF3-202ENST00000395358 C22orf23Q9BZE7 217 aa13.86□□□□□ -0.19
RAPGEF3-202ENST00000395358 TSC1Q92574 1164 aa13.85□□□□□ -0.19
RAPGEF3-202ENST00000395358 AMPHP49418 695 aa13.85□□□□□ -0.19
RAPGEF3-202ENST00000395358 FAM193AP78312 1265 aa13.85□□□□□ -0.19
RAPGEF3-202ENST00000395358 ZBTB9Q96C00 473 aa13.85□□□□□ -0.19
RAPGEF3-202ENST00000395358 CADPS2Q86UW7 1296 aa13.85□□□□□ -0.19
RAPGEF3-202ENST00000395358 CNPY4Q8N129 248 aa13.85□□□□□ -0.19
RAPGEF3-202ENST00000395358 NPHP4O75161 1426 aaPredicted RBP13.84□□□□□ -0.19
RAPGEF3-202ENST00000395358 RIMS1Q86UR5 1692 aaKnown RBP13.84□□□□□ -0.19
RAPGEF3-202ENST00000395358 MCTP1Q6DN14 999 aa13.84□□□□□ -0.19
RAPGEF3-202ENST00000395358 PUS7Q96PZ0 661 aaKnown RBP13.84□□□□□ -0.19
RAPGEF3-202ENST00000395358 PREX1Q8TCU6 1659 aa13.84□□□□□ -0.19
RAPGEF3-202ENST00000395358 SPATA31D1Q6ZQQ2 1576 aa13.84□□□□□ -0.19
RAPGEF3-202ENST00000395358 NLRP6P59044 892 aa13.84□□□□□ -0.19
RAPGEF3-202ENST00000395358 DRC7Q8IY82 874 aa13.84□□□□□ -0.19
RAPGEF3-202ENST00000395358 SIRT1Q96EB6 747 aa13.84□□□□□ -0.19
RAPGEF3-202ENST00000395358 GTF2A1P52655 376 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF3-202ENST00000395358 METP08581 1390 aa13.83□□□□□ -0.2
RAPGEF3-202ENST00000395358 FER1L4A9Z1Z3 1794 aa13.83□□□□□ -0.2
RAPGEF3-202ENST00000395358 U2AF1L5P0DN76 240 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF3-202ENST00000395358 U2AF1Q01081 240 aaKnown RBP eCLIP13.83□□□□□ -0.2
RAPGEF3-202ENST00000395358 ABTB2Q8N961 1025 aa13.83□□□□□ -0.2
RAPGEF3-202ENST00000395358 ZSCAN20P17040 1043 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-202ENST00000395358 PHF8Q9UPP1 1060 aa13.82□□□□□ -0.2
RAPGEF3-202ENST00000395358 SETD1BQ9UPS6 1966 aaKnown RBP13.82□□□□□ -0.2
RAPGEF3-202ENST00000395358 TNNT1P13805 278 aa13.82□□□□□ -0.2
RAPGEF3-202ENST00000395358 C19orf44Q9H6X5 657 aa13.82□□□□□ -0.2
RAPGEF3-202ENST00000395358 ZKSCAN5Q9Y2L8 839 aa13.82□□□□□ -0.2
RAPGEF3-202ENST00000395358 NINLQ9Y2I6 1382 aa13.82□□□□□ -0.2
RAPGEF3-202ENST00000395358 MADDQ8WXG6 1647 aa13.81□□□□□ -0.2
RAPGEF3-202ENST00000395358 PNISRQ8TF01 805 aaKnown RBP13.81□□□□□ -0.2
RAPGEF3-202ENST00000395358 MSH6P52701 1360 aa13.81□□□□□ -0.2
RAPGEF3-202ENST00000395358 SYNMO15061 1565 aa13.81□□□□□ -0.2
RAPGEF3-202ENST00000395358 C20orf194Q5TEA3 1177 aa13.81□□□□□ -0.2
RAPGEF3-202ENST00000395358 FOXD4L5Q5VV16 416 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-202ENST00000395358 FOXD4L4Q8WXT5 416 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-202ENST00000395358 NEUROD2Q15784 382 aa13.8□□□□□ -0.2
RAPGEF3-202ENST00000395358 ZNF592Q92610 1267 aa13.8□□□□□ -0.2
RAPGEF3-202ENST00000395358 RNF123Q5XPI4 1314 aa13.8□□□□□ -0.2
RAPGEF3-202ENST00000395358 NUTM2GQ5VZR2 741 aa13.8□□□□□ -0.2
RAPGEF3-202ENST00000395358 NSD3Q9BZ95 1437 aa13.8□□□□□ -0.2
RAPGEF3-202ENST00000395358 TEX35Q5T0J7 233 aa13.8□□□□□ -0.2
RAPGEF3-202ENST00000395358 SYAP1Q96A49 352 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF3-202ENST00000395358 CSB-PGBD3P0DP91 1061 aa13.79□□□□□ -0.2
RAPGEF3-202ENST00000395358 MCM5P33992 734 aa13.79□□□□□ -0.2
RAPGEF3-202ENST00000395358 PRIMPOLQ96LW4 560 aa13.79□□□□□ -0.2
RAPGEF3-202ENST00000395358 PIK3C2BO00750 1634 aa13.79□□□□□ -0.2
RAPGEF3-202ENST00000395358 LMOD3Q0VAK6 560 aa13.79□□□□□ -0.2
RAPGEF3-202ENST00000395358 U2AF2P26368 475 aaKnown RBP eCLIP13.79□□□□□ -0.2
RAPGEF3-202ENST00000395358 PIK3R4Q99570 1358 aa13.78□□□□□ -0.2
RAPGEF3-202ENST00000395358 FOXO3O43524 673 aa13.78□□□□□ -0.2
RAPGEF3-202ENST00000395358 TNPO1Q92973 898 aaKnown RBP13.78□□□□□ -0.2
RAPGEF3-202ENST00000395358 RWDD1Q9H446 243 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF3-202ENST00000395358 TOMM22Q9NS69 142 aa13.78□□□□□ -0.2
RAPGEF3-202ENST00000395358 NOL7Q9UMY1 257 aaKnown RBP13.78□□□□□ -0.2
RAPGEF3-202ENST00000395358 BCORL1Q5H9F3 1711 aa13.78□□□□□ -0.2
RAPGEF3-202ENST00000395358 KDM4FA0A1W2PPD8 638 aa13.78□□□□□ -0.2
RAPGEF3-202ENST00000395358 SBNO2Q9Y2G9 1366 aa13.77□□□□□ -0.21
RAPGEF3-202ENST00000395358 TMX1Q9H3N1 280 aa13.77□□□□□ -0.21
RAPGEF3-202ENST00000395358 COG6Q9Y2V7 657 aa13.77□□□□□ -0.21
RAPGEF3-202ENST00000395358 LTV1Q96GA3 475 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF3-202ENST00000395358 ACEP12821 1306 aa13.76□□□□□ -0.21
RAPGEF3-202ENST00000395358 HTATSF1O43719 755 aaKnown RBP13.76□□□□□ -0.21
RAPGEF3-202ENST00000395358 RBM25P49756 843 aaKnown RBP13.76□□□□□ -0.21
RAPGEF3-202ENST00000395358 GAS2L3Q86XJ1 694 aa13.76□□□□□ -0.21
RAPGEF3-202ENST00000395358 GOLGA2Q08379 1002 aa13.76□□□□□ -0.21
RAPGEF3-202ENST00000395358 IRX5P78411 483 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF3-202ENST00000395358 HS1BP3Q53T59 392 aa13.75□□□□□ -0.21
RAPGEF3-202ENST00000395358 NOM1Q5C9Z4 860 aaKnown RBP13.75□□□□□ -0.21
RAPGEF3-202ENST00000395358 ZNF526Q8TF50 670 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF3-202ENST00000395358 PPP2R1AP30153 589 aa13.75□□□□□ -0.21
RAPGEF3-202ENST00000395358 MTHFSP49914 203 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms