RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 NUDT7P0C024 238 aa15.84■□□□□ 0.13
RTN1-203ENST00000395090 DDX10Q13206 875 aaKnown RBP15.84■□□□□ 0.13
RTN1-203ENST00000395090 HIC1Q14526 733 aa15.84■□□□□ 0.13
RTN1-203ENST00000395090 TYW1BQ6NUM6 668 aa15.83■□□□□ 0.13
RTN1-203ENST00000395090 KHSRPQ92945 711 aaKnown RBP eCLIP15.83■□□□□ 0.13
RTN1-203ENST00000395090 ZNF142P52746 1687 aaPredicted RBP15.83■□□□□ 0.13
RTN1-203ENST00000395090 GNPATO15228 680 aa15.83■□□□□ 0.12
RTN1-203ENST00000395090 MAP3K7O43318 606 aa15.83■□□□□ 0.12
RTN1-203ENST00000395090 GPR153Q6NV75 609 aa15.83■□□□□ 0.12
RTN1-203ENST00000395090 ASXL1Q8IXJ9 1541 aa15.82■□□□□ 0.12
RTN1-203ENST00000395090 NRXN3Q9Y4C0 1643 aa15.82■□□□□ 0.12
RTN1-203ENST00000395090 FBXW7Q969H0 707 aa15.82■□□□□ 0.12
RTN1-203ENST00000395090 TRAK1Q9UPV9 953 aa15.82■□□□□ 0.12
RTN1-203ENST00000395090 PTGDRQ13258 359 aa15.81■□□□□ 0.12
RTN1-203ENST00000395090 NEUROD2Q15784 382 aa15.81■□□□□ 0.12
RTN1-203ENST00000395090 ADAMTS13Q76LX8 1427 aa15.81■□□□□ 0.12
RTN1-203ENST00000395090 MED14O60244 1454 aa15.81■□□□□ 0.12
RTN1-203ENST00000395090 YTHDC2Q9H6S0 1430 aaKnown RBP15.8■□□□□ 0.12
RTN1-203ENST00000395090 SBNO2Q9Y2G9 1366 aa15.8■□□□□ 0.12
RTN1-203ENST00000395090 FOSBP53539 338 aa15.8■□□□□ 0.12
RTN1-203ENST00000395090 RBM33Q96EV2 1170 aaKnown RBP15.8■□□□□ 0.12
RTN1-203ENST00000395090 SETD1AO15047 1707 aaKnown RBP15.8■□□□□ 0.12
RTN1-203ENST00000395090 POLR1AO95602 1720 aaPredicted RBP15.8■□□□□ 0.12
RTN1-203ENST00000395090 ABCC11Q96J66 1382 aa15.8■□□□□ 0.12
RTN1-203ENST00000395090 SNPHO15079 494 aa15.79■□□□□ 0.12
RTN1-203ENST00000395090 TMF1P82094 1093 aa15.79■□□□□ 0.12
RTN1-203ENST00000395090 ANKLE2Q86XL3 938 aa15.79■□□□□ 0.12
RTN1-203ENST00000395090 TBX22Q9Y458 520 aa15.79■□□□□ 0.12
RTN1-203ENST00000395090 METP08581 1390 aa15.79■□□□□ 0.12
RTN1-203ENST00000395090 MINK1Q8N4C8 1332 aaPredicted RBP15.79■□□□□ 0.12
RTN1-203ENST00000395090 CENPJQ9HC77 1338 aaPredicted RBP15.79■□□□□ 0.12
RTN1-203ENST00000395090 LRPPRCP42704 1394 aaKnown RBP15.78■□□□□ 0.12
RTN1-203ENST00000395090 MAP2K5Q13163 448 aa15.78■□□□□ 0.12
RTN1-203ENST00000395090 SIRT1Q96EB6 747 aa15.78■□□□□ 0.12
RTN1-203ENST00000395090 DISP3Q9P2K9 1392 aa15.77■□□□□ 0.11
RTN1-203ENST00000395090 ZNF454Q8N9F8 522 aa15.76■□□□□ 0.11
RTN1-203ENST00000395090 CDHR5Q9HBB8 845 aa15.76■□□□□ 0.11
RTN1-203ENST00000395090 STK26Q9P289 416 aa15.76■□□□□ 0.11
RTN1-203ENST00000395090 CDCA8Q53HL2 280 aa15.76■□□□□ 0.11
RTN1-203ENST00000395090 DLC1Q96QB1 1528 aa15.74■□□□□ 0.11
RTN1-203ENST00000395090 TECPR2O15040 1411 aa15.74■□□□□ 0.11
RTN1-203ENST00000395090 FECHP22830 423 aa15.74■□□□□ 0.11
RTN1-203ENST00000395090 TSR1Q2NL82 804 aaKnown RBP15.74■□□□□ 0.11
RTN1-203ENST00000395090 ZDHHC16Q969W1 377 aa15.74■□□□□ 0.11
RTN1-203ENST00000395090 OTUD5Q96G74 571 aa15.74■□□□□ 0.11
RTN1-203ENST00000395090 ARHGEF28Q8N1W1 1705 aaKnown RBP15.73■□□□□ 0.11
RTN1-203ENST00000395090 IRF6O14896 467 aa15.73■□□□□ 0.11
RTN1-203ENST00000395090 TRIM66O15016 1216 aa15.73■□□□□ 0.11
RTN1-203ENST00000395090 PUS7Q96PZ0 661 aaKnown RBP15.73■□□□□ 0.11
RTN1-203ENST00000395090 SLC26A8Q96RN1 970 aa15.73■□□□□ 0.11
RTN1-203ENST00000395090 NPDC1Q9NQX5 325 aaPredicted RBP15.73■□□□□ 0.11
RTN1-203ENST00000395090 TMEM132AQ24JP5 1023 aa15.72■□□□□ 0.11
RTN1-203ENST00000395090 PRAM1Q96QH2 718 aa15.72■□□□□ 0.11
RTN1-203ENST00000395090 CCDC102AQ96A19 550 aa15.72■□□□□ 0.11
RTN1-203ENST00000395090 DIP2AQ14689 1571 aa15.71■□□□□ 0.11
RTN1-203ENST00000395090 FAM135BQ49AJ0 1406 aa15.71■□□□□ 0.11
RTN1-203ENST00000395090 PIK3R4Q99570 1358 aa15.71■□□□□ 0.11
RTN1-203ENST00000395090 POGKQ9P215 609 aa15.7■□□□□ 0.1
RTN1-203ENST00000395090 LHX6Q9UPM6 363 aa15.7■□□□□ 0.1
RTN1-203ENST00000395090 POLR3GLQ9BT43 218 aa15.69■□□□□ 0.1
RTN1-203ENST00000395090 PTPRUQ92729 1446 aa15.69■□□□□ 0.1
RTN1-203ENST00000395090 WAPLQ7Z5K2 1190 aa15.68■□□□□ 0.1
RTN1-203ENST00000395090 QRICH2Q9H0J4 1663 aa15.68■□□□□ 0.1
RTN1-203ENST00000395090 PDE4DQ08499 809 aa15.68■□□□□ 0.1
RTN1-203ENST00000395090 C6orf132Q5T0Z8 1188 aa15.68■□□□□ 0.1
RTN1-203ENST00000395090 AMOTL2Q9Y2J4 779 aa15.68■□□□□ 0.1
RTN1-203ENST00000395090 EVC2Q86UK5 1308 aa15.67■□□□□ 0.1
RTN1-203ENST00000395090 KNDC1Q76NI1 1749 aa15.67■□□□□ 0.1
RTN1-203ENST00000395090 NPHP4O75161 1426 aaPredicted RBP15.67■□□□□ 0.1
RTN1-203ENST00000395090 LHX8Q68G74 356 aa15.67■□□□□ 0.1
RTN1-203ENST00000395090 PSDA5PKW4 1024 aaPredicted RBP15.66■□□□□ 0.1
RTN1-203ENST00000395090 HOXB1P14653 301 aaPredicted RBP15.66■□□□□ 0.1
RTN1-203ENST00000395090 ADAM33Q9BZ11 813 aa15.66■□□□□ 0.1
RTN1-203ENST00000395090 CPS1P31327 1500 aa15.66■□□□□ 0.1
RTN1-203ENST00000395090 ROBO2Q9HCK4 1378 aa15.66■□□□□ 0.1
RTN1-203ENST00000395090 PLEKHH1Q9ULM0 1364 aa15.66■□□□□ 0.1
RTN1-203ENST00000395090 LMTK3Q96Q04 1460 aa15.65■□□□□ 0.1
RTN1-203ENST00000395090 PER1O15534 1290 aaPredicted RBP15.65■□□□□ 0.1
RTN1-203ENST00000395090 SAFB2Q14151 953 aaKnown RBP eCLIP15.65■□□□□ 0.1
RTN1-203ENST00000395090 CERKQ8TCT0 537 aa15.65■□□□□ 0.1
RTN1-203ENST00000395090 PPP4R3BQ5MIZ7 849 aa15.65■□□□□ 0.1
RTN1-203ENST00000395090 GPBP1L1Q9HC44 474 aaPredicted RBP15.64■□□□□ 0.09
RTN1-203ENST00000395090 TULP4Q9NRJ4 1543 aa15.63■□□□□ 0.09
RTN1-203ENST00000395090 ANP32CO43423 234 aa15.63■□□□□ 0.09
RTN1-203ENST00000395090 PANK3Q9H999 370 aa15.63■□□□□ 0.09
RTN1-203ENST00000395090 PTCH1Q13635 1447 aa15.63■□□□□ 0.09
RTN1-203ENST00000395090 HSPA2P54652 639 aa15.61■□□□□ 0.09
RTN1-203ENST00000395090 XRN1Q8IZH2 1706 aaKnown RBP15.61■□□□□ 0.09
RTN1-203ENST00000395090 CDK19Q9BWU1 502 aa15.61■□□□□ 0.09
RTN1-203ENST00000395090 WASLO00401 505 aaPredicted RBP15.6■□□□□ 0.09
RTN1-203ENST00000395090 KCNA6P17658 529 aa15.6■□□□□ 0.09
RTN1-203ENST00000395090 CHD2O14647 1828 aaKnown RBP15.6■□□□□ 0.09
RTN1-203ENST00000395090 AMHR2Q16671 573 aa15.59■□□□□ 0.09
RTN1-203ENST00000395090 KDM4CQ9H3R0 1056 aa15.59■□□□□ 0.09
RTN1-203ENST00000395090 PRKRIP1Q9H875 184 aaPredicted RBP15.58■□□□□ 0.09
RTN1-203ENST00000395090 ATAD2Q6PL18 1390 aa15.58■□□□□ 0.08
RTN1-203ENST00000395090 MYOM1P52179 1685 aa15.58■□□□□ 0.08
RTN1-203ENST00000395090 SRPK2P78362 688 aaKnown RBP15.57■□□□□ 0.08
RTN1-203ENST00000395090 SLC12A5Q9H2X9 1139 aa15.57■□□□□ 0.08
RTN1-203ENST00000395090 NINLQ9Y2I6 1382 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms