RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 LRPPRCP42704 1394 aaKnown RBP20.43■□□□□ 0.86
SIN3A-203ENST00000394949 SYCE3A1L190 88 aa20.43■□□□□ 0.86
SIN3A-203ENST00000394949 NUTM2GQ5VZR2 741 aa20.42■□□□□ 0.86
SIN3A-203ENST00000394949 ZNF692Q9BU19 519 aaPredicted RBP20.42■□□□□ 0.86
SIN3A-203ENST00000394949 POLA1P09884 1462 aaPredicted RBP20.42■□□□□ 0.86
SIN3A-203ENST00000394949 AIMP1Q12904 312 aaKnown RBP20.42■□□□□ 0.86
SIN3A-203ENST00000394949 PRAM1Q96QH2 718 aa20.42■□□□□ 0.86
SIN3A-203ENST00000394949 BCL11BQ9C0K0 894 aaPredicted RBP20.42■□□□□ 0.86
SIN3A-203ENST00000394949 BRMS1Q9HCU9 246 aa20.42■□□□□ 0.86
SIN3A-203ENST00000394949 CBFA2T2O43439 604 aa20.41■□□□□ 0.86
SIN3A-203ENST00000394949 LARP1BQ659C4 914 aaKnown RBP20.41■□□□□ 0.86
SIN3A-203ENST00000394949 NEUROD6Q96NK8 337 aa20.41■□□□□ 0.86
SIN3A-203ENST00000394949 CLCN1P35523 988 aa20.41■□□□□ 0.86
SIN3A-203ENST00000394949 THEMISQ8N1K5 641 aaPredicted RBP20.41■□□□□ 0.86
SIN3A-203ENST00000394949 PPP6R1Q9UPN7 881 aa20.41■□□□□ 0.86
SIN3A-203ENST00000394949 DHX29Q7Z478 1369 aaKnown RBP20.41■□□□□ 0.86
SIN3A-203ENST00000394949 SUPT6HQ7KZ85 1726 aaKnown RBP20.41■□□□□ 0.86
SIN3A-203ENST00000394949 FMNL2Q96PY5 1086 aa20.41■□□□□ 0.86
SIN3A-203ENST00000394949 IFT140Q96RY7 1462 aa20.4■□□□□ 0.86
SIN3A-203ENST00000394949 CEP57L1Q8IYX8 460 aa20.4■□□□□ 0.86
SIN3A-203ENST00000394949 C11orf95C9JLR9 678 aaPredicted RBP20.4■□□□□ 0.86
SIN3A-203ENST00000394949 C20orf194Q5TEA3 1177 aa20.4■□□□□ 0.86
SIN3A-203ENST00000394949 NAP1L1P55209 391 aaKnown RBP20.4■□□□□ 0.86
SIN3A-203ENST00000394949 PLEKHH1Q9ULM0 1364 aa20.4■□□□□ 0.86
SIN3A-203ENST00000394949 CFAP45Q9UL16 551 aa20.39■□□□□ 0.86
SIN3A-203ENST00000394949 TNPO1Q92973 898 aaKnown RBP20.39■□□□□ 0.86
SIN3A-203ENST00000394949 DACH1Q9UI36 760 aa20.39■□□□□ 0.85
SIN3A-203ENST00000394949 ANKRD30BQ9BXX2 1392 aa20.39■□□□□ 0.85
SIN3A-203ENST00000394949 PATL2C9JE40 543 aaKnown RBP20.39■□□□□ 0.85
SIN3A-203ENST00000394949 RARSP54136 660 aaKnown RBP20.39■□□□□ 0.85
SIN3A-203ENST00000394949 SERPINC1P01008 464 aa20.38■□□□□ 0.85
SIN3A-203ENST00000394949 SLC12A5Q9H2X9 1139 aa20.38■□□□□ 0.85
SIN3A-203ENST00000394949 CCDC191Q8NCU4 936 aa20.38■□□□□ 0.85
SIN3A-203ENST00000394949 TSPYL1Q9H0U9 437 aa20.38■□□□□ 0.85
SIN3A-203ENST00000394949 MAP3K11Q16584 847 aa20.38■□□□□ 0.85
SIN3A-203ENST00000394949 SPATA32Q96LK8 384 aa20.38■□□□□ 0.85
SIN3A-203ENST00000394949 WASHC4Q2M389 1173 aa20.38■□□□□ 0.85
SIN3A-203ENST00000394949 PROSER2Q86WR7 435 aaPredicted RBP20.38■□□□□ 0.85
SIN3A-203ENST00000394949 CTDP1Q9Y5B0 961 aaPredicted RBP20.38■□□□□ 0.85
SIN3A-203ENST00000394949 MRC2Q9UBG0 1479 aa20.38■□□□□ 0.85
SIN3A-203ENST00000394949 CCDC183Q5T5S1 534 aa20.37■□□□□ 0.85
SIN3A-203ENST00000394949 MPNDQ8N594 471 aa20.37■□□□□ 0.85
SIN3A-203ENST00000394949 SLC4A2P04920 1241 aa20.37■□□□□ 0.85
SIN3A-203ENST00000394949 TMEM57Q8N5G2 664 aa20.37■□□□□ 0.85
SIN3A-203ENST00000394949 RBM33Q96EV2 1170 aaKnown RBP20.37■□□□□ 0.85
SIN3A-203ENST00000394949 DYNC1I1O14576 645 aa20.36■□□□□ 0.85
SIN3A-203ENST00000394949 MEX3CQ5U5Q3 659 aaKnown RBP20.36■□□□□ 0.85
SIN3A-203ENST00000394949 MYO6Q9UM54 1294 aa20.36■□□□□ 0.85
SIN3A-203ENST00000394949 RPGRIP1LQ68CZ1 1315 aa20.36■□□□□ 0.85
SIN3A-203ENST00000394949 ESCO1Q5FWF5 840 aa20.36■□□□□ 0.85
SIN3A-203ENST00000394949 HECW1Q76N89 1606 aa20.36■□□□□ 0.85
SIN3A-203ENST00000394949 TBC1D32Q96NH3 1257 aa20.36■□□□□ 0.85
SIN3A-203ENST00000394949 TCEAL9Q9UHQ7 104 aa20.36■□□□□ 0.85
SIN3A-203ENST00000394949 USP8P40818 1118 aa20.36■□□□□ 0.85
SIN3A-203ENST00000394949 RAD21O60216 631 aa20.35■□□□□ 0.85
SIN3A-203ENST00000394949 AXDND1Q5T1B0 1012 aaPredicted RBP20.35■□□□□ 0.85
SIN3A-203ENST00000394949 ALDH1L2Q3SY69 923 aa20.35■□□□□ 0.85
SIN3A-203ENST00000394949 FCHSD2O94868 740 aa20.35■□□□□ 0.85
SIN3A-203ENST00000394949 ME1P48163 572 aa20.35■□□□□ 0.85
SIN3A-203ENST00000394949 ABCC11Q96J66 1382 aa20.35■□□□□ 0.85
SIN3A-203ENST00000394949 SART3Q15020 963 aaKnown RBP20.34■□□□□ 0.85
SIN3A-203ENST00000394949 RRP12Q5JTH9 1297 aaKnown RBP20.34■□□□□ 0.85
SIN3A-203ENST00000394949 UBXN4Q92575 508 aa20.34■□□□□ 0.85
SIN3A-203ENST00000394949 PDRG1Q9NUG6 133 aa20.34■□□□□ 0.85
SIN3A-203ENST00000394949 BLOC1S2Q6QNY1 142 aa20.34■□□□□ 0.85
SIN3A-203ENST00000394949 XPCQ01831 940 aaPredicted RBP20.34■□□□□ 0.85
SIN3A-203ENST00000394949 KLHL40Q2TBA0 621 aa20.34■□□□□ 0.85
SIN3A-203ENST00000394949 PPFIBP1Q86W92 1011 aa20.34■□□□□ 0.85
SIN3A-203ENST00000394949 DUSP27Q5VZP5 1158 aa20.33■□□□□ 0.85
SIN3A-203ENST00000394949 CGNQ9P2M7 1197 aaKnown RBP20.33■□□□□ 0.85
SIN3A-203ENST00000394949 SMTNL1A8MU46 457 aa20.32■□□□□ 0.84
SIN3A-203ENST00000394949 CDK19Q9BWU1 502 aa20.32■□□□□ 0.84
SIN3A-203ENST00000394949 KRT32Q14532 448 aa20.32■□□□□ 0.84
SIN3A-203ENST00000394949 PRIMPOLQ96LW4 560 aa20.32■□□□□ 0.84
SIN3A-203ENST00000394949 CABP1Q9NZU7 370 aa20.32■□□□□ 0.84
SIN3A-203ENST00000394949 OFD1O75665 1012 aa20.31■□□□□ 0.84
SIN3A-203ENST00000394949 KIAA0754O94854 1291 aa20.31■□□□□ 0.84
SIN3A-203ENST00000394949 SSFA2P28290 1259 aa20.31■□□□□ 0.84
SIN3A-203ENST00000394949 CEBPZQ03701 1054 aaKnown RBP20.31■□□□□ 0.84
SIN3A-203ENST00000394949 UPF3BQ9BZI7 483 aaKnown RBP20.31■□□□□ 0.84
SIN3A-203ENST00000394949 TMPOP42166 694 aaKnown RBP20.31■□□□□ 0.84
SIN3A-203ENST00000394949 PTPN14Q15678 1187 aa20.31■□□□□ 0.84
SIN3A-203ENST00000394949 TTLL5Q6EMB2 1281 aa20.31■□□□□ 0.84
SIN3A-203ENST00000394949 TMCO3Q6UWJ1 677 aa20.31■□□□□ 0.84
SIN3A-203ENST00000394949 TOPBP1Q92547 1522 aa20.31■□□□□ 0.84
SIN3A-203ENST00000394949 TATP17735 454 aaPredicted RBP20.31■□□□□ 0.84
SIN3A-203ENST00000394949 ZNHIT6Q9NWK9 470 aaKnown RBP20.31■□□□□ 0.84
SIN3A-203ENST00000394949 SULT6B1Q6IMI4 303 aa20.3■□□□□ 0.84
SIN3A-203ENST00000394949 FILIP1Q7Z7B0 1213 aa20.3■□□□□ 0.84
SIN3A-203ENST00000394949 TBC1D2BQ9UPU7 963 aa20.3■□□□□ 0.84
SIN3A-203ENST00000394949 SKAP1Q86WV1 359 aa20.3■□□□□ 0.84
SIN3A-203ENST00000394949 CALCOCO1Q9P1Z2 691 aa20.3■□□□□ 0.84
SIN3A-203ENST00000394949 MAGEC2Q9UBF1 373 aaPredicted RBP20.3■□□□□ 0.84
SIN3A-203ENST00000394949 UVSSAQ2YD98 709 aa20.3■□□□□ 0.84
SIN3A-203ENST00000394949 KIF18AQ8NI77 898 aa20.3■□□□□ 0.84
SIN3A-203ENST00000394949 NEMFO60524 1076 aa20.29■□□□□ 0.84
SIN3A-203ENST00000394949 HDGFL1Q5TGJ6 251 aa20.29■□□□□ 0.84
SIN3A-203ENST00000394949 SCAND2PQ9GZW5 306 aaPredicted RBP20.29■□□□□ 0.84
SIN3A-203ENST00000394949 TXLNAP40222 546 aa20.29■□□□□ 0.84
SIN3A-203ENST00000394949 CBX1P83916 185 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms