RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 RSPH6AQ9H0K4 717 aa22.35■■□□□ 1.17
SLC6A4-202ENST00000394821 NPHP3Q7Z494 1330 aa22.35■■□□□ 1.17
SLC6A4-202ENST00000394821 SBNO1A3KN83 1393 aa22.35■■□□□ 1.17
SLC6A4-202ENST00000394821 RRP1P56182 461 aaKnown RBP22.35■■□□□ 1.17
SLC6A4-202ENST00000394821 SPINK5Q9NQ38 1064 aaPredicted RBP22.35■■□□□ 1.17
SLC6A4-202ENST00000394821 AEBP1Q8IUX7 1158 aa22.34■■□□□ 1.17
SLC6A4-202ENST00000394821 PRKAR2BP31323 418 aa22.33■■□□□ 1.17
SLC6A4-202ENST00000394821 FLT4P35916 1363 aa22.33■■□□□ 1.17
SLC6A4-202ENST00000394821 GCP02774 474 aa22.33■■□□□ 1.16
SLC6A4-202ENST00000394821 HOXC9P31274 260 aa22.33■■□□□ 1.16
SLC6A4-202ENST00000394821 CABLES1Q8TDN4 633 aa22.33■■□□□ 1.16
SLC6A4-202ENST00000394821 PHACTR3Q96KR7 559 aa22.33■■□□□ 1.16
SLC6A4-202ENST00000394821 MED1Q15648 1581 aaPredicted RBP22.32■■□□□ 1.16
SLC6A4-202ENST00000394821 DUSP27Q5VZP5 1158 aa22.31■■□□□ 1.16
SLC6A4-202ENST00000394821 WWC1Q8IX03 1113 aa22.31■■□□□ 1.16
SLC6A4-202ENST00000394821 LTV1Q96GA3 475 aaPredicted RBP22.31■■□□□ 1.16
SLC6A4-202ENST00000394821 SLIT3O75094 1523 aa22.3■■□□□ 1.16
SLC6A4-202ENST00000394821 FCHSD2O94868 740 aa22.3■■□□□ 1.16
SLC6A4-202ENST00000394821 GOLGA2Q08379 1002 aa22.3■■□□□ 1.16
SLC6A4-202ENST00000394821 USP19O94966 1318 aa22.3■■□□□ 1.16
SLC6A4-202ENST00000394821 SULT6B1Q6IMI4 303 aa22.29■■□□□ 1.16
SLC6A4-202ENST00000394821 SPATA31A3Q5VYP0 1347 aa22.29■■□□□ 1.16
SLC6A4-202ENST00000394821 RGPD1P0DJD0 1748 aa22.28■■□□□ 1.16
SLC6A4-202ENST00000394821 TMPOP42166 694 aaKnown RBP22.28■■□□□ 1.16
SLC6A4-202ENST00000394821 TNS3Q68CZ2 1445 aa22.28■■□□□ 1.16
SLC6A4-202ENST00000394821 KCNH5Q8NCM2 988 aa22.28■■□□□ 1.16
SLC6A4-202ENST00000394821 MAPK8IP3Q9UPT6 1336 aa22.27■■□□□ 1.16
SLC6A4-202ENST00000394821 ZC3H6P61129 1189 aaKnown RBP22.27■■□□□ 1.16
SLC6A4-202ENST00000394821 SLFN5Q08AF3 891 aa22.27■■□□□ 1.16
SLC6A4-202ENST00000394821 SOS2Q07890 1332 aaPredicted RBP22.26■■□□□ 1.15
SLC6A4-202ENST00000394821 ARHGEF25Q86VW2 580 aa22.26■■□□□ 1.15
SLC6A4-202ENST00000394821 TRMT2AQ8IZ69 625 aaKnown RBP22.26■■□□□ 1.15
SLC6A4-202ENST00000394821 EYA1Q99502 592 aa22.26■■□□□ 1.15
SLC6A4-202ENST00000394821 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
SLC6A4-202ENST00000394821 TRIM35Q9UPQ4 493 aa22.25■■□□□ 1.15
SLC6A4-202ENST00000394821 IP6K1Q92551 441 aa22.25■■□□□ 1.15
SLC6A4-202ENST00000394821 AXIN2Q9Y2T1 843 aa22.24■■□□□ 1.15
SLC6A4-202ENST00000394821 AEBP2Q6ZN18 517 aaPredicted RBP22.23■■□□□ 1.15
SLC6A4-202ENST00000394821 PHRF1Q9P1Y6 1649 aaKnown RBP22.23■■□□□ 1.15
SLC6A4-202ENST00000394821 RIPK4P57078 832 aa22.23■■□□□ 1.15
SLC6A4-202ENST00000394821 NGEFQ8N5V2 710 aa22.22■■□□□ 1.15
SLC6A4-202ENST00000394821 USHBP1Q8N6Y0 703 aa22.22■■□□□ 1.15
SLC6A4-202ENST00000394821 RGPD5Q99666 1765 aa22.22■■□□□ 1.15
SLC6A4-202ENST00000394821 NHSL1Q5SYE7 1610 aa22.22■■□□□ 1.15
SLC6A4-202ENST00000394821 PLIN1O60240 522 aa22.22■■□□□ 1.15
SLC6A4-202ENST00000394821 RGPD2P0DJD1 1756 aa22.22■■□□□ 1.15
SLC6A4-202ENST00000394821 CRYBG1Q9Y4K1 1723 aa22.21■■□□□ 1.15
SLC6A4-202ENST00000394821 ROBO1Q9Y6N7 1651 aa22.21■■□□□ 1.15
SLC6A4-202ENST00000394821 KIF24Q5T7B8 1368 aa22.21■■□□□ 1.15
SLC6A4-202ENST00000394821 EXOC6Q8TAG9 804 aa22.21■■□□□ 1.15
SLC6A4-202ENST00000394821 PNNQ9H307 717 aaKnown RBP22.2■■□□□ 1.14
SLC6A4-202ENST00000394821 RTL1A6NKG5 1358 aa22.2■■□□□ 1.14
SLC6A4-202ENST00000394821 IGSF1Q8N6C5 1336 aa22.2■■□□□ 1.14
SLC6A4-202ENST00000394821 CCDC27Q2M243 656 aa22.19■■□□□ 1.14
SLC6A4-202ENST00000394821 LRRC59Q96AG4 307 aaKnown RBP22.19■■□□□ 1.14
SLC6A4-202ENST00000394821 DLG5Q8TDM6 1919 aa22.19■■□□□ 1.14
SLC6A4-202ENST00000394821 ARHGEF10O15013 1369 aa22.18■■□□□ 1.14
SLC6A4-202ENST00000394821 CHRNA2Q15822 529 aa22.18■■□□□ 1.14
SLC6A4-202ENST00000394821 CCDC136Q96JN2 1154 aa22.18■■□□□ 1.14
SLC6A4-202ENST00000394821 NFE2L2Q16236 605 aa22.18■■□□□ 1.14
SLC6A4-202ENST00000394821 NBPF6Q5VWK0 638 aa22.18■■□□□ 1.14
SLC6A4-202ENST00000394821 NBPF4Q96M43 638 aa22.18■■□□□ 1.14
SLC6A4-202ENST00000394821 THUMPD2Q9BTF0 503 aaKnown RBP22.18■■□□□ 1.14
SLC6A4-202ENST00000394821 E9PSI1 815 aa22.16■■□□□ 1.14
SLC6A4-202ENST00000394821 FAM83GA6ND36 823 aa22.16■■□□□ 1.14
SLC6A4-202ENST00000394821 KDRP35968 1356 aa22.15■■□□□ 1.14
SLC6A4-202ENST00000394821 NEFMP07197 916 aa22.15■■□□□ 1.14
SLC6A4-202ENST00000394821 WDR63Q8IWG1 891 aa22.14■■□□□ 1.13
SLC6A4-202ENST00000394821 ANKRD24Q8TF21 1146 aa22.14■■□□□ 1.13
SLC6A4-202ENST00000394821 KIAA0232Q92628 1395 aa22.14■■□□□ 1.13
SLC6A4-202ENST00000394821 DCTN1Q14203 1278 aa22.14■■□□□ 1.13
SLC6A4-202ENST00000394821 PIP4K2BP78356 416 aa22.13■■□□□ 1.13
SLC6A4-202ENST00000394821 COL18A1P39060 1754 aa22.13■■□□□ 1.13
SLC6A4-202ENST00000394821 NCBP3Q53F19 620 aaKnown RBP22.12■■□□□ 1.13
SLC6A4-202ENST00000394821 C20orf194Q5TEA3 1177 aa22.12■■□□□ 1.13
SLC6A4-202ENST00000394821 TSR2Q969E8 191 aaKnown RBP22.12■■□□□ 1.13
SLC6A4-202ENST00000394821 MTHFSDQ2M296 383 aaKnown RBP22.11■■□□□ 1.13
SLC6A4-202ENST00000394821 ABCA3Q99758 1704 aa22.1■■□□□ 1.13
SLC6A4-202ENST00000394821 RBM19Q9Y4C8 960 aaKnown RBP22.09■■□□□ 1.13
SLC6A4-202ENST00000394821 CRBNQ96SW2 442 aa22.09■■□□□ 1.13
SLC6A4-202ENST00000394821 ERBB3P21860 1342 aa22.08■■□□□ 1.12
SLC6A4-202ENST00000394821 MCM10Q7L590 875 aa22.06■■□□□ 1.12
SLC6A4-202ENST00000394821 AHDC1Q5TGY3 1603 aaPredicted RBP22.06■■□□□ 1.12
SLC6A4-202ENST00000394821 HAP1P54257 671 aaPredicted RBP22.06■■□□□ 1.12
SLC6A4-202ENST00000394821 LAS1LQ9Y4W2 734 aaKnown RBP22.06■■□□□ 1.12
SLC6A4-202ENST00000394821 FANCIQ9NVI1 1328 aa22.06■■□□□ 1.12
SLC6A4-202ENST00000394821 CPDO75976 1380 aa22.05■■□□□ 1.12
SLC6A4-202ENST00000394821 BCAR3O75815 825 aa22.04■■□□□ 1.12
SLC6A4-202ENST00000394821 UBAP1LF5GYI3 381 aa22.04■■□□□ 1.12
SLC6A4-202ENST00000394821 PRDM11Q9NQV5 511 aa22.04■■□□□ 1.12
SLC6A4-202ENST00000394821 TOM1O60784 492 aa22.03■■□□□ 1.12
SLC6A4-202ENST00000394821 CAMTA1Q9Y6Y1 1673 aa22.02■■□□□ 1.12
SLC6A4-202ENST00000394821 PHLPP1O60346 1717 aa22.02■■□□□ 1.12
SLC6A4-202ENST00000394821 MYH16Q9H6N6 1097 aa22.01■■□□□ 1.11
SLC6A4-202ENST00000394821 NLRP2Q9NX02 1062 aa22.01■■□□□ 1.11
SLC6A4-202ENST00000394821 EXOSC9Q06265 439 aaKnown RBP22.01■■□□□ 1.11
SLC6A4-202ENST00000394821 IL16Q14005 1332 aa22■■□□□ 1.11
SLC6A4-202ENST00000394821 COL16A1Q07092 1604 aaPredicted RBP22■■□□□ 1.11
SLC6A4-202ENST00000394821 NCAPD2Q15021 1401 aa22■■□□□ 1.11
SLC6A4-202ENST00000394821 CSB-PGBD3P0DP91 1061 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms