RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 SULT6B1Q6IMI4 303 aa24.83■■□□□ 1.57
CLDND1-203ENST00000394181 AMPHP49418 695 aa24.83■■□□□ 1.56
CLDND1-203ENST00000394181 NFE2L2Q16236 605 aa24.82■■□□□ 1.56
CLDND1-203ENST00000394181 SBNO1A3KN83 1393 aa24.81■■□□□ 1.56
CLDND1-203ENST00000394181 CRBNQ96SW2 442 aa24.81■■□□□ 1.56
CLDND1-203ENST00000394181 C1orf167Q5SNV9 1468 aa24.81■■□□□ 1.56
CLDND1-203ENST00000394181 NEFMP07197 916 aa24.8■■□□□ 1.56
CLDND1-203ENST00000394181 THUMPD2Q9BTF0 503 aaKnown RBP24.8■■□□□ 1.56
CLDND1-203ENST00000394181 MYH16Q9H6N6 1097 aa24.8■■□□□ 1.56
CLDND1-203ENST00000394181 PLEKHG5O94827 1062 aa24.8■■□□□ 1.56
CLDND1-203ENST00000394181 PELP1Q8IZL8 1130 aaKnown RBP24.8■■□□□ 1.56
CLDND1-203ENST00000394181 FLT4P35916 1363 aa24.79■■□□□ 1.56
CLDND1-203ENST00000394181 FANCIQ9NVI1 1328 aa24.79■■□□□ 1.56
CLDND1-203ENST00000394181 CCDC136Q96JN2 1154 aa24.78■■□□□ 1.56
CLDND1-203ENST00000394181 STRCQ7RTU9 1775 aa24.78■■□□□ 1.56
CLDND1-203ENST00000394181 ATF3P18847 181 aa24.78■■□□□ 1.56
CLDND1-203ENST00000394181 DDX17Q92841 729 aaKnown RBP24.77■■□□□ 1.56
CLDND1-203ENST00000394181 HOXC9P31274 260 aa24.76■■□□□ 1.55
CLDND1-203ENST00000394181 RARSP54136 660 aaKnown RBP24.75■■□□□ 1.55
CLDND1-203ENST00000394181 KRT28Q7Z3Y7 464 aa24.75■■□□□ 1.55
CLDND1-203ENST00000394181 FAM83GA6ND36 823 aa24.74■■□□□ 1.55
CLDND1-203ENST00000394181 EXOSC9Q06265 439 aaKnown RBP24.74■■□□□ 1.55
CLDND1-203ENST00000394181 LMOD2Q6P5Q4 547 aa24.74■■□□□ 1.55
CLDND1-203ENST00000394181 MST1RQ04912 1400 aa24.74■■□□□ 1.55
CLDND1-203ENST00000394181 USP54Q70EL1 1684 aa24.74■■□□□ 1.55
CLDND1-203ENST00000394181 EYA1Q99502 592 aa24.74■■□□□ 1.55
CLDND1-203ENST00000394181 IL16Q14005 1332 aa24.74■■□□□ 1.55
CLDND1-203ENST00000394181 BCL2L13Q9BXK5 485 aa24.73■■□□□ 1.55
CLDND1-203ENST00000394181 RGPD1P0DJD0 1748 aa24.73■■□□□ 1.55
CLDND1-203ENST00000394181 LTV1Q96GA3 475 aaPredicted RBP24.73■■□□□ 1.55
CLDND1-203ENST00000394181 DCTN1Q14203 1278 aa24.72■■□□□ 1.55
CLDND1-203ENST00000394181 LAS1LQ9Y4W2 734 aaKnown RBP24.72■■□□□ 1.55
CLDND1-203ENST00000394181 ZNF335Q9H4Z2 1342 aaPredicted RBP24.72■■□□□ 1.55
CLDND1-203ENST00000394181 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.71■■□□□ 1.55
CLDND1-203ENST00000394181 ZBTB7CA1YPR0 619 aa24.7■■□□□ 1.55
CLDND1-203ENST00000394181 TSHZ2Q9NRE2 1034 aa24.69■■□□□ 1.54
CLDND1-203ENST00000394181 ARHGEF10O15013 1369 aa24.69■■□□□ 1.54
CLDND1-203ENST00000394181 NFAT5O94916 1531 aa24.69■■□□□ 1.54
CLDND1-203ENST00000394181 NCOA3Q9Y6Q9 1424 aa24.68■■□□□ 1.54
CLDND1-203ENST00000394181 IGSF1Q8N6C5 1336 aa24.68■■□□□ 1.54
CLDND1-203ENST00000394181 CADPS2Q86UW7 1296 aa24.67■■□□□ 1.54
CLDND1-203ENST00000394181 FRAT1Q92837 279 aaPredicted RBP24.67■■□□□ 1.54
CLDND1-203ENST00000394181 GCP02774 474 aa24.67■■□□□ 1.54
CLDND1-203ENST00000394181 DCCP43146 1447 aa24.66■■□□□ 1.54
CLDND1-203ENST00000394181 KIF24Q5T7B8 1368 aa24.66■■□□□ 1.54
CLDND1-203ENST00000394181 TNNQ9UQP3 1299 aa24.66■■□□□ 1.54
CLDND1-203ENST00000394181 DLG5Q8TDM6 1919 aa24.65■■□□□ 1.54
CLDND1-203ENST00000394181 IP6K1Q92551 441 aa24.65■■□□□ 1.54
CLDND1-203ENST00000394181 TRPM3Q9HCF6 1732 aaPredicted RBP24.65■■□□□ 1.54
CLDND1-203ENST00000394181 KDRP35968 1356 aa24.65■■□□□ 1.54
CLDND1-203ENST00000394181 MSH6P52701 1360 aa24.65■■□□□ 1.54
CLDND1-203ENST00000394181 KCNH5Q8NCM2 988 aa24.64■■□□□ 1.54
CLDND1-203ENST00000394181 PANK1Q8TE04 598 aa24.64■■□□□ 1.53
CLDND1-203ENST00000394181 XIRP1Q702N8 1843 aaKnown RBP24.64■■□□□ 1.53
CLDND1-203ENST00000394181 MTHFSDQ2M296 383 aaKnown RBP24.63■■□□□ 1.53
CLDND1-203ENST00000394181 USHBP1Q8N6Y0 703 aa24.63■■□□□ 1.53
CLDND1-203ENST00000394181 KIF1AQ12756 1690 aa24.63■■□□□ 1.53
CLDND1-203ENST00000394181 ZNF853P0CG23 659 aa24.63■■□□□ 1.53
CLDND1-203ENST00000394181 MCM10Q7L590 875 aa24.63■■□□□ 1.53
CLDND1-203ENST00000394181 LTN1O94822 1766 aa24.62■■□□□ 1.53
CLDND1-203ENST00000394181 CANXP27824 592 aaKnown RBP24.62■■□□□ 1.53
CLDND1-203ENST00000394181 MBIPQ9NS73 344 aa24.62■■□□□ 1.53
CLDND1-203ENST00000394181 LMOD3Q0VAK6 560 aa24.61■■□□□ 1.53
CLDND1-203ENST00000394181 SSH1Q8WYL5 1049 aa24.61■■□□□ 1.53
CLDND1-203ENST00000394181 IFT57Q9NWB7 429 aa24.61■■□□□ 1.53
CLDND1-203ENST00000394181 ARHGEF25Q86VW2 580 aa24.6■■□□□ 1.53
CLDND1-203ENST00000394181 RTL1A6NKG5 1358 aa24.6■■□□□ 1.53
CLDND1-203ENST00000394181 USP19O94966 1318 aa24.6■■□□□ 1.53
CLDND1-203ENST00000394181 CT47B1P0C2W7 299 aaPredicted RBP24.59■■□□□ 1.53
CLDND1-203ENST00000394181 GNAI1P63096 354 aa24.59■■□□□ 1.53
CLDND1-203ENST00000394181 CALD1Q05682 793 aaKnown RBP24.59■■□□□ 1.53
CLDND1-203ENST00000394181 RLBP1P12271 317 aa24.59■■□□□ 1.53
CLDND1-203ENST00000394181 PDE3AQ14432 1141 aa24.59■■□□□ 1.53
CLDND1-203ENST00000394181 NBPF6Q5VWK0 638 aa24.59■■□□□ 1.53
CLDND1-203ENST00000394181 TSPYL6Q8N831 410 aa24.59■■□□□ 1.53
CLDND1-203ENST00000394181 NBPF4Q96M43 638 aa24.59■■□□□ 1.53
CLDND1-203ENST00000394181 SLIT3O75094 1523 aa24.58■■□□□ 1.53
CLDND1-203ENST00000394181 CFAP44Q96MT7 982 aa24.58■■□□□ 1.53
CLDND1-203ENST00000394181 SMC4Q9NTJ3 1288 aa24.57■■□□□ 1.52
CLDND1-203ENST00000394181 COG6Q9Y2V7 657 aa24.57■■□□□ 1.52
CLDND1-203ENST00000394181 LRRC59Q96AG4 307 aaKnown RBP24.57■■□□□ 1.52
CLDND1-203ENST00000394181 AXIN2Q9Y2T1 843 aa24.57■■□□□ 1.52
CLDND1-203ENST00000394181 ELL2O00472 640 aaPredicted RBP24.56■■□□□ 1.52
CLDND1-203ENST00000394181 BRINP3Q76B58 766 aa24.56■■□□□ 1.52
CLDND1-203ENST00000394181 CLUAP1Q96AJ1 413 aa24.56■■□□□ 1.52
CLDND1-203ENST00000394181 ZC3H6P61129 1189 aaKnown RBP24.56■■□□□ 1.52
CLDND1-203ENST00000394181 CABLES1Q8TDN4 633 aa24.56■■□□□ 1.52
CLDND1-203ENST00000394181 NPHP3Q7Z494 1330 aa24.55■■□□□ 1.52
CLDND1-203ENST00000394181 C8orf58Q8NAV2 365 aa24.54■■□□□ 1.52
CLDND1-203ENST00000394181 MED1Q15648 1581 aaPredicted RBP24.54■■□□□ 1.52
CLDND1-203ENST00000394181 ALS2Q96Q42 1657 aa24.54■■□□□ 1.52
CLDND1-203ENST00000394181 VAMP4O75379 141 aa24.53■■□□□ 1.52
CLDND1-203ENST00000394181 SLAIN2Q9P270 581 aa24.53■■□□□ 1.52
CLDND1-203ENST00000394181 MIS18AQ9NYP9 233 aa24.52■■□□□ 1.52
CLDND1-203ENST00000394181 PXDNQ92626 1479 aa24.51■■□□□ 1.51
CLDND1-203ENST00000394181 NOB1Q9ULX3 412 aaKnown RBP24.51■■□□□ 1.51
CLDND1-203ENST00000394181 TCERG1O14776 1098 aaKnown RBP24.5■■□□□ 1.51
CLDND1-203ENST00000394181 CRB1P82279 1406 aa24.5■■□□□ 1.51
CLDND1-203ENST00000394181 CHL1O00533 1208 aa24.5■■□□□ 1.51
CLDND1-203ENST00000394181 KRT24Q2M2I5 525 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms