RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 RIMS1Q86UR5 1692 aaKnown RBP7.89□□□□□ -1.15
CASC3-202ENST00000394114 MS4A4AQ96JQ5 239 aa7.89□□□□□ -1.15
CASC3-202ENST00000394114 PTPRMP28827 1452 aa7.89□□□□□ -1.15
CASC3-202ENST00000394114 SLC12A5Q9H2X9 1139 aa7.89□□□□□ -1.15
CASC3-202ENST00000394114 LTKP29376 864 aa7.88□□□□□ -1.15
CASC3-202ENST00000394114 WAPLQ7Z5K2 1190 aa7.88□□□□□ -1.15
CASC3-202ENST00000394114 TMEM2Q9UHN6 1383 aa7.88□□□□□ -1.15
CASC3-202ENST00000394114 SBNO2Q9Y2G9 1366 aa7.88□□□□□ -1.15
CASC3-202ENST00000394114 SPDYE5A6NIY4 337 aa7.88□□□□□ -1.15
CASC3-202ENST00000394114 RALBP1Q15311 655 aa7.88□□□□□ -1.15
CASC3-202ENST00000394114 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.88□□□□□ -1.15
CASC3-202ENST00000394114 EMILIN3Q9NT22 766 aa7.88□□□□□ -1.15
CASC3-202ENST00000394114 ZNF330Q9Y3S2 320 aaPredicted RBP7.88□□□□□ -1.15
CASC3-202ENST00000394114 MYBBP1AQ9BQG0 1328 aaKnown RBP7.88□□□□□ -1.15
CASC3-202ENST00000394114 NRXN3Q9Y4C0 1643 aa7.88□□□□□ -1.15
CASC3-202ENST00000394114 BRD1O95696 1058 aa7.88□□□□□ -1.15
CASC3-202ENST00000394114 SRPK2P78362 688 aaKnown RBP7.88□□□□□ -1.15
CASC3-202ENST00000394114 PPP1R15BQ5SWA1 713 aa7.88□□□□□ -1.15
CASC3-202ENST00000394114 TXNDC2Q86VQ3 553 aa7.88□□□□□ -1.15
CASC3-202ENST00000394114 TULP4Q9NRJ4 1543 aa7.87□□□□□ -1.15
CASC3-202ENST00000394114 METP08581 1390 aa7.87□□□□□ -1.15
CASC3-202ENST00000394114 PARD3Q8TEW0 1356 aa7.87□□□□□ -1.15
CASC3-202ENST00000394114 SLC26A8Q96RN1 970 aa7.87□□□□□ -1.15
CASC3-202ENST00000394114 TSPYL2Q9H2G4 693 aaPredicted RBP7.87□□□□□ -1.15
CASC3-202ENST00000394114 CLEC11AQ9Y240 323 aa7.87□□□□□ -1.15
CASC3-202ENST00000394114 SETD1AO15047 1707 aaKnown RBP7.87□□□□□ -1.15
CASC3-202ENST00000394114 SKIV2LQ15477 1246 aaKnown RBP7.87□□□□□ -1.15
CASC3-202ENST00000394114 CARD14Q9BXL6 1004 aa7.87□□□□□ -1.15
CASC3-202ENST00000394114 EVC2Q86UK5 1308 aa7.87□□□□□ -1.15
CASC3-202ENST00000394114 PLEKHH1Q9ULM0 1364 aa7.86□□□□□ -1.15
CASC3-202ENST00000394114 NLRP1Q9C000 1473 aa7.86□□□□□ -1.15
CASC3-202ENST00000394114 FECHP22830 423 aa7.86□□□□□ -1.15
CASC3-202ENST00000394114 HDGFP51858 240 aaKnown RBP7.86□□□□□ -1.15
CASC3-202ENST00000394114 USP35Q9P2H5 1018 aa7.86□□□□□ -1.15
CASC3-202ENST00000394114 NUTM2FA1L443 756 aa7.86□□□□□ -1.15
CASC3-202ENST00000394114 HIC1Q14526 733 aa7.86□□□□□ -1.15
CASC3-202ENST00000394114 REPIN1Q9BWE0 567 aaKnown RBP7.86□□□□□ -1.15
CASC3-202ENST00000394114 NLRP13Q86W25 1043 aa7.85□□□□□ -1.15
CASC3-202ENST00000394114 PNISRQ8TF01 805 aaKnown RBP7.85□□□□□ -1.15
CASC3-202ENST00000394114 EID1Q9Y6B2 187 aa7.85□□□□□ -1.15
CASC3-202ENST00000394114 TNNT2P45379 298 aaPredicted RBP7.84□□□□□ -1.15
CASC3-202ENST00000394114 BRD4O60885 1362 aaPredicted RBP7.84□□□□□ -1.15
CASC3-202ENST00000394114 LRPPRCP42704 1394 aaKnown RBP7.84□□□□□ -1.15
CASC3-202ENST00000394114 ILDR2Q71H61 639 aa7.84□□□□□ -1.15
CASC3-202ENST00000394114 CDK19Q9BWU1 502 aa7.84□□□□□ -1.15
CASC3-202ENST00000394114 NSD3Q9BZ95 1437 aa7.84□□□□□ -1.16
CASC3-202ENST00000394114 THEMISQ8N1K5 641 aaPredicted RBP7.83□□□□□ -1.16
CASC3-202ENST00000394114 FBXO41Q8TF61 875 aa7.83□□□□□ -1.16
CASC3-202ENST00000394114 ADAMTS13Q76LX8 1427 aa7.83□□□□□ -1.16
CASC3-202ENST00000394114 CCDC27Q2M243 656 aa7.83□□□□□ -1.16
CASC3-202ENST00000394114 ADAMTSL3P82987 1691 aa7.83□□□□□ -1.16
CASC3-202ENST00000394114 KDM4FA0A1W2PPD8 638 aa7.82□□□□□ -1.16
CASC3-202ENST00000394114 PPP2R1AP30153 589 aa7.82□□□□□ -1.16
CASC3-202ENST00000394114 GPHNQ9NQX3 736 aaPredicted RBP7.82□□□□□ -1.16
CASC3-202ENST00000394114 SALL2Q9Y467 1007 aaPredicted RBP7.82□□□□□ -1.16
CASC3-202ENST00000394114 ABCC11Q96J66 1382 aa7.82□□□□□ -1.16
CASC3-202ENST00000394114 CEP170BQ9Y4F5 1589 aaPredicted RBP7.82□□□□□ -1.16
CASC3-202ENST00000394114 CCDC61Q9Y6R9 512 aa7.82□□□□□ -1.16
CASC3-202ENST00000394114 PLEKHG1Q9ULL1 1385 aa7.82□□□□□ -1.16
CASC3-202ENST00000394114 FCHSD2O94868 740 aa7.82□□□□□ -1.16
CASC3-202ENST00000394114 HSPA2P54652 639 aa7.82□□□□□ -1.16
CASC3-202ENST00000394114 USTQ9Y2C2 406 aa7.82□□□□□ -1.16
CASC3-202ENST00000394114 ROBO2Q9HCK4 1378 aa7.81□□□□□ -1.16
CASC3-202ENST00000394114 PROCA1Q8NCQ7 364 aaPredicted RBP7.81□□□□□ -1.16
CASC3-202ENST00000394114 TMUB1Q9BVT8 246 aa7.81□□□□□ -1.16
CASC3-202ENST00000394114 CABP1Q9NZU7 370 aa7.81□□□□□ -1.16
CASC3-202ENST00000394114 SLIT1O75093 1534 aa7.81□□□□□ -1.16
CASC3-202ENST00000394114 A0A1W2PP64 1363 aa7.81□□□□□ -1.16
CASC3-202ENST00000394114 ARHGAP23Q9P227 1491 aa7.8□□□□□ -1.16
CASC3-202ENST00000394114 DLC1Q96QB1 1528 aa7.8□□□□□ -1.16
CASC3-202ENST00000394114 IFNL1Q8IU54 200 aa7.8□□□□□ -1.16
CASC3-202ENST00000394114 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.8□□□□□ -1.16
CASC3-202ENST00000394114 SETD1BQ9UPS6 1966 aaKnown RBP7.8□□□□□ -1.16
CASC3-202ENST00000394114 MORC1Q86VD1 984 aa7.8□□□□□ -1.16
CASC3-202ENST00000394114 BANK1Q8NDB2 785 aa7.8□□□□□ -1.16
CASC3-202ENST00000394114 IGSF5Q9NSI5 407 aa7.8□□□□□ -1.16
CASC3-202ENST00000394114 ANKRD36BQ8N2N9 1353 aa7.8□□□□□ -1.16
CASC3-202ENST00000394114 PTPRUQ92729 1446 aa7.79□□□□□ -1.16
CASC3-202ENST00000394114 UBE2Q2Q8WVN8 375 aa7.79□□□□□ -1.16
CASC3-202ENST00000394114 CALR3Q96L12 384 aaKnown RBP7.79□□□□□ -1.16
CASC3-202ENST00000394114 ATAD2Q6PL18 1390 aa7.79□□□□□ -1.16
CASC3-202ENST00000394114 WASLO00401 505 aaPredicted RBP7.79□□□□□ -1.16
CASC3-202ENST00000394114 RBM33Q96EV2 1170 aaKnown RBP7.79□□□□□ -1.16
CASC3-202ENST00000394114 SNRKQ9NRH2 765 aa7.79□□□□□ -1.16
CASC3-202ENST00000394114 CGNL1Q0VF96 1302 aa7.79□□□□□ -1.16
CASC3-202ENST00000394114 ZBED9Q6R2W3 1325 aa7.79□□□□□ -1.16
CASC3-202ENST00000394114 KNDC1Q76NI1 1749 aa7.78□□□□□ -1.16
CASC3-202ENST00000394114 GRXCR2A6NFK2 248 aa7.78□□□□□ -1.16
CASC3-202ENST00000394114 OSBPP22059 807 aa7.78□□□□□ -1.16
CASC3-202ENST00000394114 SND1Q7KZF4 910 aaKnown RBP eCLIP7.78□□□□□ -1.16
CASC3-202ENST00000394114 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.78□□□□□ -1.16
CASC3-202ENST00000394114 GGNBP2Q9H3C7 697 aa7.78□□□□□ -1.16
CASC3-202ENST00000394114 TERF2IPQ9NYB0 399 aa7.78□□□□□ -1.16
CASC3-202ENST00000394114 NPC1L1Q9UHC9 1359 aa7.78□□□□□ -1.16
CASC3-202ENST00000394114 PBXIP1Q96AQ6 731 aa7.78□□□□□ -1.16
CASC3-202ENST00000394114 TECPR2O15040 1411 aa7.78□□□□□ -1.16
CASC3-202ENST00000394114 CPS1P31327 1500 aa7.77□□□□□ -1.16
CASC3-202ENST00000394114 ANKLE2Q86XL3 938 aa7.77□□□□□ -1.16
CASC3-202ENST00000394114 ADAMTS8Q9UP79 889 aa7.77□□□□□ -1.16
CASC3-202ENST00000394114 MED14O60244 1454 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms