RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 AMOTL2Q9Y2J4 779 aa18.75■□□□□ 0.59
CDH16-202ENST00000394055 SLC4A3P48751 1232 aa18.75■□□□□ 0.59
CDH16-202ENST00000394055 AAMPQ13685 434 aa18.75■□□□□ 0.59
CDH16-202ENST00000394055 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.75■□□□□ 0.59
CDH16-202ENST00000394055 PDZRN3Q9UPQ7 1066 aa18.74■□□□□ 0.59
CDH16-202ENST00000394055 ELL2O00472 640 aaPredicted RBP18.74■□□□□ 0.59
CDH16-202ENST00000394055 RWDD1Q9H446 243 aaPredicted RBP18.74■□□□□ 0.59
CDH16-202ENST00000394055 TMEM57Q8N5G2 664 aa18.73■□□□□ 0.59
CDH16-202ENST00000394055 FAM83GA6ND36 823 aa18.73■□□□□ 0.59
CDH16-202ENST00000394055 DDRGK1Q96HY6 314 aa18.73■□□□□ 0.59
CDH16-202ENST00000394055 AEBP1Q8IUX7 1158 aa18.73■□□□□ 0.59
CDH16-202ENST00000394055 DCTN1Q14203 1278 aa18.72■□□□□ 0.59
CDH16-202ENST00000394055 TSPYL6Q8N831 410 aa18.72■□□□□ 0.59
CDH16-202ENST00000394055 KIF16BQ96L93 1317 aa18.71■□□□□ 0.59
CDH16-202ENST00000394055 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
CDH16-202ENST00000394055 DDX19BQ9UMR2 479 aa18.71■□□□□ 0.59
CDH16-202ENST00000394055 EIF4A2Q14240 407 aaKnown RBP18.7■□□□□ 0.58
CDH16-202ENST00000394055 PLEKHG3A1L390 1219 aa18.7■□□□□ 0.58
CDH16-202ENST00000394055 MBIPQ9NS73 344 aa18.7■□□□□ 0.58
CDH16-202ENST00000394055 USP6P35125 1406 aa18.7■□□□□ 0.58
CDH16-202ENST00000394055 SEC24BO95487 1268 aa18.69■□□□□ 0.58
CDH16-202ENST00000394055 SULT6B1Q6IMI4 303 aa18.69■□□□□ 0.58
CDH16-202ENST00000394055 IPO8O15397 1037 aaKnown RBP18.69■□□□□ 0.58
CDH16-202ENST00000394055 HSP90AB2PQ58FF8 381 aa18.69■□□□□ 0.58
CDH16-202ENST00000394055 EIF5BO60841 1220 aaKnown RBP18.68■□□□□ 0.58
CDH16-202ENST00000394055 GNAI1P63096 354 aa18.68■□□□□ 0.58
CDH16-202ENST00000394055 CALD1Q05682 793 aaKnown RBP18.68■□□□□ 0.58
CDH16-202ENST00000394055 ALDH1L2Q3SY69 923 aa18.68■□□□□ 0.58
CDH16-202ENST00000394055 FER1L4A9Z1Z3 1794 aa18.68■□□□□ 0.58
CDH16-202ENST00000394055 IFT57Q9NWB7 429 aa18.68■□□□□ 0.58
CDH16-202ENST00000394055 TOPAZ1Q8N9V7 1692 aa18.68■□□□□ 0.58
CDH16-202ENST00000394055 VAMP4O75379 141 aa18.67■□□□□ 0.58
CDH16-202ENST00000394055 NRKQ7Z2Y5 1582 aa18.67■□□□□ 0.58
CDH16-202ENST00000394055 OVOS2A0A0J9YW53 1432 aa18.67■□□□□ 0.58
CDH16-202ENST00000394055 OVOS2Q6IE36 1432 aa18.67■□□□□ 0.58
CDH16-202ENST00000394055 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
CDH16-202ENST00000394055 TBX22Q9Y458 520 aa18.67■□□□□ 0.58
CDH16-202ENST00000394055 ARHGAP23Q9P227 1491 aa18.66■□□□□ 0.58
CDH16-202ENST00000394055 SLIT1O75093 1534 aa18.66■□□□□ 0.58
CDH16-202ENST00000394055 NGDNQ8NEJ9 315 aaKnown RBP18.66■□□□□ 0.58
CDH16-202ENST00000394055 DAXXQ9UER7 740 aaPredicted RBP18.66■□□□□ 0.58
CDH16-202ENST00000394055 DLG5Q8TDM6 1919 aa18.66■□□□□ 0.58
CDH16-202ENST00000394055 ZNF853P0CG23 659 aa18.65■□□□□ 0.58
CDH16-202ENST00000394055 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
CDH16-202ENST00000394055 C8orf58Q8NAV2 365 aa18.65■□□□□ 0.58
CDH16-202ENST00000394055 IL27Q8NEV9 243 aa18.65■□□□□ 0.58
CDH16-202ENST00000394055 RTL5Q5HYW3 569 aaPredicted RBP18.64■□□□□ 0.58
CDH16-202ENST00000394055 RTN4Q9NQC3 1192 aaKnown RBP18.64■□□□□ 0.58
CDH16-202ENST00000394055 TWISTNBQ3B726 338 aaPredicted RBP18.64■□□□□ 0.57
CDH16-202ENST00000394055 ZBTB40Q9NUA8 1239 aa18.64■□□□□ 0.57
CDH16-202ENST00000394055 MRPL50Q8N5N7 158 aaKnown RBP18.64■□□□□ 0.57
CDH16-202ENST00000394055 CFAP44Q96MT7 982 aa18.64■□□□□ 0.57
CDH16-202ENST00000394055 USP19O94966 1318 aa18.63■□□□□ 0.57
CDH16-202ENST00000394055 VIRMAQ69YN4 1812 aaKnown RBP18.62■□□□□ 0.57
CDH16-202ENST00000394055 PEAK1Q9H792 1746 aa18.62■□□□□ 0.57
CDH16-202ENST00000394055 KCNA6P17658 529 aa18.62■□□□□ 0.57
CDH16-202ENST00000394055 HDAC1Q13547 482 aaPredicted RBP18.62■□□□□ 0.57
CDH16-202ENST00000394055 MCM10Q7L590 875 aa18.61■□□□□ 0.57
CDH16-202ENST00000394055 MAP3K19Q56UN5 1328 aa18.61■□□□□ 0.57
CDH16-202ENST00000394055 RGPD8O14715 1765 aaPredicted RBP18.61■□□□□ 0.57
CDH16-202ENST00000394055 ZNF428Q96B54 188 aa18.61■□□□□ 0.57
CDH16-202ENST00000394055 DIP2AQ14689 1571 aa18.61■□□□□ 0.57
CDH16-202ENST00000394055 PTCH1Q13635 1447 aa18.6■□□□□ 0.57
CDH16-202ENST00000394055 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
CDH16-202ENST00000394055 C1orf115Q9H7X2 142 aa18.6■□□□□ 0.57
CDH16-202ENST00000394055 SSH2Q76I76 1423 aa18.6■□□□□ 0.57
CDH16-202ENST00000394055 KRT24Q2M2I5 525 aa18.6■□□□□ 0.57
CDH16-202ENST00000394055 USP31Q70CQ4 1352 aa18.59■□□□□ 0.57
CDH16-202ENST00000394055 BRPF1P55201 1214 aaPredicted RBP18.58■□□□□ 0.57
CDH16-202ENST00000394055 RBM33Q96EV2 1170 aaKnown RBP18.58■□□□□ 0.57
CDH16-202ENST00000394055 TTC21AQ8NDW8 1320 aa18.57■□□□□ 0.56
CDH16-202ENST00000394055 SMC5Q8IY18 1101 aa18.57■□□□□ 0.56
CDH16-202ENST00000394055 NALCNQ8IZF0 1738 aa18.57■□□□□ 0.56
CDH16-202ENST00000394055 PKNOX2Q96KN3 472 aa18.57■□□□□ 0.56
CDH16-202ENST00000394055 FOXO3O43524 673 aa18.56■□□□□ 0.56
CDH16-202ENST00000394055 AMPHP49418 695 aa18.56■□□□□ 0.56
CDH16-202ENST00000394055 ZBTB7BO15156 539 aaPredicted RBP18.56■□□□□ 0.56
CDH16-202ENST00000394055 NLRP6P59044 892 aa18.56■□□□□ 0.56
CDH16-202ENST00000394055 ARHGAP45Q92619 1136 aa18.55■□□□□ 0.56
CDH16-202ENST00000394055 LNPKQ9C0E8 428 aa18.55■□□□□ 0.56
CDH16-202ENST00000394055 MIS18AQ9NYP9 233 aa18.54■□□□□ 0.56
CDH16-202ENST00000394055 XRN1Q8IZH2 1706 aaKnown RBP18.53■□□□□ 0.56
CDH16-202ENST00000394055 FLT4P35916 1363 aa18.53■□□□□ 0.56
CDH16-202ENST00000394055 ABCC4O15439 1325 aa18.53■□□□□ 0.56
CDH16-202ENST00000394055 C14orf37Q86TY3 774 aa18.53■□□□□ 0.56
CDH16-202ENST00000394055 UPF2Q9HAU5 1272 aaKnown RBP18.53■□□□□ 0.56
CDH16-202ENST00000394055 RIMS1Q86UR5 1692 aaKnown RBP18.52■□□□□ 0.56
CDH16-202ENST00000394055 SBNO1A3KN83 1393 aa18.52■□□□□ 0.56
CDH16-202ENST00000394055 MTHFSDQ2M296 383 aaKnown RBP18.52■□□□□ 0.55
CDH16-202ENST00000394055 CEP170BQ9Y4F5 1589 aaPredicted RBP18.52■□□□□ 0.55
CDH16-202ENST00000394055 RGPD1P0DJD0 1748 aa18.51■□□□□ 0.55
CDH16-202ENST00000394055 PIK3R4Q99570 1358 aa18.51■□□□□ 0.55
CDH16-202ENST00000394055 PIK3C2AO00443 1686 aa18.51■□□□□ 0.55
CDH16-202ENST00000394055 CHL1O00533 1208 aa18.51■□□□□ 0.55
CDH16-202ENST00000394055 EYA1Q99502 592 aa18.51■□□□□ 0.55
CDH16-202ENST00000394055 NUCB1Q02818 461 aa18.5■□□□□ 0.55
CDH16-202ENST00000394055 API5Q9BZZ5 524 aaKnown RBP18.5■□□□□ 0.55
CDH16-202ENST00000394055 ARHGEF10O15013 1369 aa18.5■□□□□ 0.55
CDH16-202ENST00000394055 ABTB2Q8N961 1025 aa18.5■□□□□ 0.55
CDH16-202ENST00000394055 LTV1Q96GA3 475 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms