RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 MNS1Q8NEH6 495 aa13.86□□□□□ -0.19
LAMB1-203ENST00000393560 TMTC2Q8N394 836 aa13.86□□□□□ -0.19
LAMB1-203ENST00000393560 CCDC39Q9UFE4 941 aa13.86□□□□□ -0.19
LAMB1-203ENST00000393560 PPP1R12AO14974 1030 aaPredicted RBP13.85□□□□□ -0.19
LAMB1-203ENST00000393560 CCDC96Q2M329 555 aa13.85□□□□□ -0.19
LAMB1-203ENST00000393560 ZC3H12AQ5D1E8 599 aaKnown RBP13.85□□□□□ -0.19
LAMB1-203ENST00000393560 ITFG2Q969R8 447 aa13.85□□□□□ -0.19
LAMB1-203ENST00000393560 CTNNA3Q9UI47 895 aa13.85□□□□□ -0.19
LAMB1-203ENST00000393560 E2F4Q16254 413 aa13.84□□□□□ -0.19
LAMB1-203ENST00000393560 AFAP1Q8N556 730 aa13.84□□□□□ -0.19
LAMB1-203ENST00000393560 DDX41Q9UJV9 622 aaKnown RBP13.84□□□□□ -0.19
LAMB1-203ENST00000393560 UHRF1BP1LA0JNW5 1464 aa13.84□□□□□ -0.19
LAMB1-203ENST00000393560 GOLGA6L6A8MZA4 724 aa13.84□□□□□ -0.19
LAMB1-203ENST00000393560 KDM2BQ8NHM5 1336 aa13.84□□□□□ -0.19
LAMB1-203ENST00000393560 SHANK2Q9UPX8 1470 aa13.83□□□□□ -0.19
LAMB1-203ENST00000393560 SKOR2Q2VWA4 1001 aaPredicted RBP13.83□□□□□ -0.19
LAMB1-203ENST00000393560 CENPQQ7L2Z9 268 aaPredicted RBP13.83□□□□□ -0.19
LAMB1-203ENST00000393560 BSDC1Q9NW68 430 aaPredicted RBP13.83□□□□□ -0.19
LAMB1-203ENST00000393560 ARHGEF12Q9NZN5 1544 aa13.83□□□□□ -0.2
LAMB1-203ENST00000393560 RPAINQ86UA6 219 aa13.82□□□□□ -0.2
LAMB1-203ENST00000393560 PLCH2O75038 1416 aa13.82□□□□□ -0.2
LAMB1-203ENST00000393560 RPRD2Q5VT52 1461 aaKnown RBP13.82□□□□□ -0.2
LAMB1-203ENST00000393560 CCDC91Q7Z6B0 441 aa13.82□□□□□ -0.2
LAMB1-203ENST00000393560 MORC2Q9Y6X9 1032 aaPredicted RBP13.82□□□□□ -0.2
LAMB1-203ENST00000393560 KIAA1107Q9UPP5 1409 aa13.81□□□□□ -0.2
LAMB1-203ENST00000393560 MYO5CQ9NQX4 1742 aa13.81□□□□□ -0.2
LAMB1-203ENST00000393560 CCT2P78371 535 aaKnown RBP13.81□□□□□ -0.2
LAMB1-203ENST00000393560 ARHGEF5Q12774 1597 aa13.81□□□□□ -0.2
LAMB1-203ENST00000393560 TSGA10IPQ3SY00 556 aa13.81□□□□□ -0.2
LAMB1-203ENST00000393560 KRT222Q8N1A0 295 aa13.81□□□□□ -0.2
LAMB1-203ENST00000393560 DEF6Q9H4E7 631 aa13.81□□□□□ -0.2
LAMB1-203ENST00000393560 POLKQ9UBT6 870 aa13.81□□□□□ -0.2
LAMB1-203ENST00000393560 MYO1CO00159 1063 aa13.81□□□□□ -0.2
LAMB1-203ENST00000393560 CCDC27Q2M243 656 aa13.81□□□□□ -0.2
LAMB1-203ENST00000393560 HSP90AB1P08238 724 aaKnown RBP13.8□□□□□ -0.2
LAMB1-203ENST00000393560 SYT10Q6XYQ8 523 aa13.8□□□□□ -0.2
LAMB1-203ENST00000393560 CDCA7LQ96GN5 454 aa13.8□□□□□ -0.2
LAMB1-203ENST00000393560 RPS6KL1Q9Y6S9 549 aa13.8□□□□□ -0.2
LAMB1-203ENST00000393560 TRAPPC8Q9Y2L5 1435 aa13.79□□□□□ -0.2
LAMB1-203ENST00000393560 POLD1P28340 1107 aa13.79□□□□□ -0.2
LAMB1-203ENST00000393560 NOLC1Q14978 699 aaKnown RBP eCLIP13.79□□□□□ -0.23e-6■■■■■ 34
LAMB1-203ENST00000393560 ZNF446Q9NWS9 450 aa13.79□□□□□ -0.2
LAMB1-203ENST00000393560 KLHL33A6NCF5 533 aa13.79□□□□□ -0.2
LAMB1-203ENST00000393560 RIOK3O14730 519 aaKnown RBP13.79□□□□□ -0.2
LAMB1-203ENST00000393560 ATP2B1P20020 1258 aa13.79□□□□□ -0.2
LAMB1-203ENST00000393560 CYP2C19P33261 490 aa13.79□□□□□ -0.2
LAMB1-203ENST00000393560 NFATC2IPQ8NCF5 419 aa13.79□□□□□ -0.2
LAMB1-203ENST00000393560 RBSNQ9H1K0 784 aa13.79□□□□□ -0.2
LAMB1-203ENST00000393560 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
LAMB1-203ENST00000393560 CALRP27797 417 aaKnown RBP13.78□□□□□ -0.2
LAMB1-203ENST00000393560 LCMT1Q9UIC8 334 aa13.78□□□□□ -0.2
LAMB1-203ENST00000393560 H0YHG0 523 aa13.78□□□□□ -0.2
LAMB1-203ENST00000393560 SARNPP82979 210 aaKnown RBP13.78□□□□□ -0.2
LAMB1-203ENST00000393560 C17orf53Q8N3J3 647 aaPredicted RBP13.78□□□□□ -0.2
LAMB1-203ENST00000393560 JMYQ8N9B5 988 aa13.78□□□□□ -0.2
LAMB1-203ENST00000393560 WDR7Q9Y4E6 1490 aa13.78□□□□□ -0.2
LAMB1-203ENST00000393560 PRPF38AQ8NAV1 312 aaKnown RBP13.77□□□□□ -0.2
LAMB1-203ENST00000393560 ST7Q9NRC1 585 aa13.77□□□□□ -0.2
LAMB1-203ENST00000393560 PLEKHH2Q8IVE3 1493 aa13.77□□□□□ -0.2
LAMB1-203ENST00000393560 ASXL2Q76L83 1435 aa13.77□□□□□ -0.21
LAMB1-203ENST00000393560 ATP6V1AP38606 617 aa13.77□□□□□ -0.21
LAMB1-203ENST00000393560 MTA1Q13330 715 aa13.77□□□□□ -0.21
LAMB1-203ENST00000393560 MAP9Q49MG5 647 aa13.77□□□□□ -0.21
LAMB1-203ENST00000393560 NUTM2GQ5VZR2 741 aa13.77□□□□□ -0.21
LAMB1-203ENST00000393560 TEX14Q8IWB6 1497 aa13.76□□□□□ -0.21
LAMB1-203ENST00000393560 SPATA31E1Q6ZUB1 1445 aa13.76□□□□□ -0.21
LAMB1-203ENST00000393560 GSCP56915 257 aaPredicted RBP13.76□□□□□ -0.21
LAMB1-203ENST00000393560 RINLQ6ZS11 566 aa13.76□□□□□ -0.21
LAMB1-203ENST00000393560 GOLGA6L1Q8N7Z2 621 aa13.76□□□□□ -0.21
LAMB1-203ENST00000393560 GBP4Q96PP9 640 aa13.76□□□□□ -0.21
LAMB1-203ENST00000393560 SPAG9O60271 1321 aaKnown RBP13.76□□□□□ -0.21
LAMB1-203ENST00000393560 KIF18AQ8NI77 898 aa13.76□□□□□ -0.21
LAMB1-203ENST00000393560 NCBP1Q09161 790 aaKnown RBP13.75□□□□□ -0.21
LAMB1-203ENST00000393560 TTC19Q6DKK2 380 aaPredicted RBP13.75□□□□□ -0.21
LAMB1-203ENST00000393560 ST20-MTHFSA0A0A6YYL1 179 aa13.74□□□□□ -0.21
LAMB1-203ENST00000393560 CAND2O75155 1236 aa13.74□□□□□ -0.21
LAMB1-203ENST00000393560 FOXD4L6Q3SYB3 417 aaPredicted RBP13.74□□□□□ -0.21
LAMB1-203ENST00000393560 FOXD4L3Q6VB84 417 aaPredicted RBP13.74□□□□□ -0.21
LAMB1-203ENST00000393560 MAP2K2P36507 400 aa13.74□□□□□ -0.21
LAMB1-203ENST00000393560 DDX49Q9Y6V7 483 aaKnown RBP13.74□□□□□ -0.21
LAMB1-203ENST00000393560 DHX29Q7Z478 1369 aaKnown RBP13.74□□□□□ -0.21
LAMB1-203ENST00000393560 A0A1B0GUL7 405 aa13.73□□□□□ -0.21
LAMB1-203ENST00000393560 C11orf91Q3C1V1 193 aa13.73□□□□□ -0.21
LAMB1-203ENST00000393560 C1QTNF12Q5T7M4 302 aa13.73□□□□□ -0.21
LAMB1-203ENST00000393560 ANKRD23Q86SG2 305 aa13.73□□□□□ -0.21
LAMB1-203ENST00000393560 MORC1Q86VD1 984 aa13.73□□□□□ -0.21
LAMB1-203ENST00000393560 FAM184AQ8NB25 1140 aa13.73□□□□□ -0.21
LAMB1-203ENST00000393560 PIBF1Q8WXW3 757 aa13.73□□□□□ -0.21
LAMB1-203ENST00000393560 REC8O95072 547 aa13.73□□□□□ -0.21
LAMB1-203ENST00000393560 CYB5RLQ6IPT4 315 aa13.73□□□□□ -0.21
LAMB1-203ENST00000393560 CARD11Q9BXL7 1154 aa13.73□□□□□ -0.21
LAMB1-203ENST00000393560 NBPF3Q9H094 633 aa13.73□□□□□ -0.21
LAMB1-203ENST00000393560 DIAPH3Q9NSV4 1193 aa13.73□□□□□ -0.21
LAMB1-203ENST00000393560 INHBEP58166 350 aa13.72□□□□□ -0.21
LAMB1-203ENST00000393560 CHAF1AQ13111 956 aaPredicted RBP13.72□□□□□ -0.21
LAMB1-203ENST00000393560 TTC31Q49AM3 519 aaPredicted RBP13.72□□□□□ -0.21
LAMB1-203ENST00000393560 PAIP2Q9BPZ3 127 aaKnown RBP13.72□□□□□ -0.21
LAMB1-203ENST00000393560 FANCAO15360 1455 aa13.72□□□□□ -0.21
LAMB1-203ENST00000393560 CTIFO43310 598 aaKnown RBP13.72□□□□□ -0.21
LAMB1-203ENST00000393560 ANKRD20A12PQ8NF67 263 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms