RNA–Protein interactions for RNA: ENST00000393448.6

RUFY1-203, Transcript of RUN and FYVE domain containing 1, humanhuman

TSL 1 (best)

Gene RUFY1, Length 2,320 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-203ENST00000393448 STRCP1A6NGW2 1772 aa22.78■■□□□ 1.24
RUFY1-203ENST00000393448 FANCIQ9NVI1 1328 aa22.78■■□□□ 1.24
RUFY1-203ENST00000393448 XPCQ01831 940 aaPredicted RBP22.77■■□□□ 1.24
RUFY1-203ENST00000393448 PSME1Q06323 249 aa22.77■■□□□ 1.24
RUFY1-203ENST00000393448 NFE2L2Q16236 605 aa22.77■■□□□ 1.24
RUFY1-203ENST00000393448 SULT6B1Q6IMI4 303 aa22.77■■□□□ 1.24
RUFY1-203ENST00000393448 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.76■■□□□ 1.23
RUFY1-203ENST00000393448 THUMPD2Q9BTF0 503 aaKnown RBP22.76■■□□□ 1.23
RUFY1-203ENST00000393448 FOXO3O43524 673 aa22.75■■□□□ 1.23
RUFY1-203ENST00000393448 AMPHP49418 695 aa22.75■■□□□ 1.23
RUFY1-203ENST00000393448 BCL2L13Q9BXK5 485 aa22.75■■□□□ 1.23
RUFY1-203ENST00000393448 RARSP54136 660 aaKnown RBP22.74■■□□□ 1.23
RUFY1-203ENST00000393448 SBNO1A3KN83 1393 aa22.74■■□□□ 1.23
RUFY1-203ENST00000393448 FLT4P35916 1363 aa22.74■■□□□ 1.23
RUFY1-203ENST00000393448 DLG5Q8TDM6 1919 aa22.73■■□□□ 1.23
RUFY1-203ENST00000393448 EXOSC9Q06265 439 aaKnown RBP22.73■■□□□ 1.23
RUFY1-203ENST00000393448 TMEM94Q12767 1356 aa22.72■■□□□ 1.23
RUFY1-203ENST00000393448 C19orf44Q9H6X5 657 aa22.72■■□□□ 1.23
RUFY1-203ENST00000393448 RGPD1P0DJD0 1748 aa22.72■■□□□ 1.23
RUFY1-203ENST00000393448 PLEKHG5O94827 1062 aa22.71■■□□□ 1.23
RUFY1-203ENST00000393448 FRAT1Q92837 279 aaPredicted RBP22.71■■□□□ 1.23
RUFY1-203ENST00000393448 LAS1LQ9Y4W2 734 aaKnown RBP22.71■■□□□ 1.23
RUFY1-203ENST00000393448 USP54Q70EL1 1684 aa22.71■■□□□ 1.23
RUFY1-203ENST00000393448 IL16Q14005 1332 aa22.71■■□□□ 1.23
RUFY1-203ENST00000393448 FAM83GA6ND36 823 aa22.7■■□□□ 1.22
RUFY1-203ENST00000393448 LMTK3Q96Q04 1460 aa22.69■■□□□ 1.22
RUFY1-203ENST00000393448 CANXP27824 592 aaKnown RBP22.69■■□□□ 1.22
RUFY1-203ENST00000393448 C1orf167Q5SNV9 1468 aa22.68■■□□□ 1.22
RUFY1-203ENST00000393448 HOXC9P31274 260 aa22.68■■□□□ 1.22
RUFY1-203ENST00000393448 DCTN1Q14203 1278 aa22.68■■□□□ 1.22
RUFY1-203ENST00000393448 TNNQ9UQP3 1299 aa22.66■■□□□ 1.22
RUFY1-203ENST00000393448 PANK1Q8TE04 598 aa22.66■■□□□ 1.22
RUFY1-203ENST00000393448 EYA1Q99502 592 aa22.66■■□□□ 1.22
RUFY1-203ENST00000393448 ANP32EQ9BTT0 268 aa22.66■■□□□ 1.22
RUFY1-203ENST00000393448 LMOD2Q6P5Q4 547 aa22.65■■□□□ 1.22
RUFY1-203ENST00000393448 LTV1Q96GA3 475 aaPredicted RBP22.65■■□□□ 1.22
RUFY1-203ENST00000393448 LTN1O94822 1766 aa22.65■■□□□ 1.22
RUFY1-203ENST00000393448 ATF3P18847 181 aa22.64■■□□□ 1.22
RUFY1-203ENST00000393448 STRCQ7RTU9 1775 aa22.64■■□□□ 1.22
RUFY1-203ENST00000393448 ARHGEF10O15013 1369 aa22.64■■□□□ 1.21
RUFY1-203ENST00000393448 ZBTB7CA1YPR0 619 aa22.64■■□□□ 1.21
RUFY1-203ENST00000393448 DDX17Q92841 729 aaKnown RBP22.63■■□□□ 1.21
RUFY1-203ENST00000393448 KRT28Q7Z3Y7 464 aa22.62■■□□□ 1.21
RUFY1-203ENST00000393448 NFAT5O94916 1531 aa22.62■■□□□ 1.21
RUFY1-203ENST00000393448 IGSF1Q8N6C5 1336 aa22.62■■□□□ 1.21
RUFY1-203ENST00000393448 COG6Q9Y2V7 657 aa22.62■■□□□ 1.21
RUFY1-203ENST00000393448 MST1RQ04912 1400 aa22.61■■□□□ 1.21
RUFY1-203ENST00000393448 PDE3AQ14432 1141 aa22.6■■□□□ 1.21
RUFY1-203ENST00000393448 SSH1Q8WYL5 1049 aa22.6■■□□□ 1.21
RUFY1-203ENST00000393448 RLBP1P12271 317 aa22.6■■□□□ 1.21
RUFY1-203ENST00000393448 LMOD3Q0VAK6 560 aa22.6■■□□□ 1.21
RUFY1-203ENST00000393448 SMC4Q9NTJ3 1288 aa22.6■■□□□ 1.21
RUFY1-203ENST00000393448 TRPM3Q9HCF6 1732 aaPredicted RBP22.6■■□□□ 1.21
RUFY1-203ENST00000393448 CT47B1P0C2W7 299 aaPredicted RBP22.59■■□□□ 1.21
RUFY1-203ENST00000393448 CLUAP1Q96AJ1 413 aa22.59■■□□□ 1.21
RUFY1-203ENST00000393448 MBIPQ9NS73 344 aa22.59■■□□□ 1.21
RUFY1-203ENST00000393448 KDRP35968 1356 aa22.59■■□□□ 1.21
RUFY1-203ENST00000393448 KIF24Q5T7B8 1368 aa22.59■■□□□ 1.21
RUFY1-203ENST00000393448 MCM10Q7L590 875 aa22.59■■□□□ 1.21
RUFY1-203ENST00000393448 IFT57Q9NWB7 429 aa22.59■■□□□ 1.21
RUFY1-203ENST00000393448 KIF1AQ12756 1690 aa22.59■■□□□ 1.21
RUFY1-203ENST00000393448 ZNF853P0CG23 659 aa22.58■■□□□ 1.21
RUFY1-203ENST00000393448 CALD1Q05682 793 aaKnown RBP22.58■■□□□ 1.21
RUFY1-203ENST00000393448 GNAI1P63096 354 aa22.58■■□□□ 1.2
RUFY1-203ENST00000393448 MTHFSDQ2M296 383 aaKnown RBP22.58■■□□□ 1.2
RUFY1-203ENST00000393448 USHBP1Q8N6Y0 703 aa22.57■■□□□ 1.2
RUFY1-203ENST00000393448 GCP02774 474 aa22.57■■□□□ 1.2
RUFY1-203ENST00000393448 XIRP1Q702N8 1843 aaKnown RBP22.57■■□□□ 1.2
RUFY1-203ENST00000393448 ELL2O00472 640 aaPredicted RBP22.56■■□□□ 1.2
RUFY1-203ENST00000393448 TSPYL6Q8N831 410 aa22.56■■□□□ 1.2
RUFY1-203ENST00000393448 KCNH5Q8NCM2 988 aa22.56■■□□□ 1.2
RUFY1-203ENST00000393448 IP6K1Q92551 441 aa22.56■■□□□ 1.2
RUFY1-203ENST00000393448 CFAP44Q96MT7 982 aa22.56■■□□□ 1.2
RUFY1-203ENST00000393448 SKAP1Q86WV1 359 aa22.55■■□□□ 1.2
RUFY1-203ENST00000393448 RBM19Q9Y4C8 960 aaKnown RBP22.55■■□□□ 1.2
RUFY1-203ENST00000393448 RTL1A6NKG5 1358 aa22.55■■□□□ 1.2
RUFY1-203ENST00000393448 DCCP43146 1447 aa22.55■■□□□ 1.2
RUFY1-203ENST00000393448 ZNF335Q9H4Z2 1342 aaPredicted RBP22.54■■□□□ 1.2
RUFY1-203ENST00000393448 CADPS2Q86UW7 1296 aa22.54■■□□□ 1.2
RUFY1-203ENST00000393448 NCOA3Q9Y6Q9 1424 aa22.54■■□□□ 1.2
RUFY1-203ENST00000393448 MSH6P52701 1360 aa22.53■■□□□ 1.2
RUFY1-203ENST00000393448 ZKSCAN2Q63HK3 967 aa22.53■■□□□ 1.2
RUFY1-203ENST00000393448 AEBP2Q6ZN18 517 aaPredicted RBP22.53■■□□□ 1.2
RUFY1-203ENST00000393448 NOB1Q9ULX3 412 aaKnown RBP22.52■■□□□ 1.2
RUFY1-203ENST00000393448 KDM2BQ8NHM5 1336 aa22.52■■□□□ 1.2
RUFY1-203ENST00000393448 SLIT3O75094 1523 aa22.52■■□□□ 1.2
RUFY1-203ENST00000393448 C8orf58Q8NAV2 365 aa22.51■■□□□ 1.19
RUFY1-203ENST00000393448 VAMP4O75379 141 aa22.51■■□□□ 1.19
RUFY1-203ENST00000393448 RGPD2P0DJD1 1756 aa22.5■■□□□ 1.19
RUFY1-203ENST00000393448 USP19O94966 1318 aa22.5■■□□□ 1.19
RUFY1-203ENST00000393448 TCERG1O14776 1098 aaKnown RBP22.5■■□□□ 1.19
RUFY1-203ENST00000393448 TRIM27P14373 513 aa22.5■■□□□ 1.19
RUFY1-203ENST00000393448 NBPF6Q5VWK0 638 aa22.5■■□□□ 1.19
RUFY1-203ENST00000393448 ARHGEF25Q86VW2 580 aa22.5■■□□□ 1.19
RUFY1-203ENST00000393448 NBPF4Q96M43 638 aa22.5■■□□□ 1.19
RUFY1-203ENST00000393448 ALS2Q96Q42 1657 aa22.5■■□□□ 1.19
RUFY1-203ENST00000393448 LRRC59Q96AG4 307 aaKnown RBP22.49■■□□□ 1.19
RUFY1-203ENST00000393448 KRT24Q2M2I5 525 aa22.48■■□□□ 1.19
RUFY1-203ENST00000393448 FTSJ3Q8IY81 847 aaKnown RBP22.48■■□□□ 1.19
RUFY1-203ENST00000393448 TWISTNBQ3B726 338 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms