RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 NFAT5O94916 1531 aa22.96■■□□□ 1.27
MBD4-202ENST00000393278 HMOX1P09601 288 aa22.96■■□□□ 1.27
MBD4-202ENST00000393278 SPINK5Q9NQ38 1064 aaPredicted RBP22.96■■□□□ 1.27
MBD4-202ENST00000393278 RCAN3Q9UKA8 241 aa22.96■■□□□ 1.27
MBD4-202ENST00000393278 AMPHP49418 695 aa22.95■■□□□ 1.26
MBD4-202ENST00000393278 WDR63Q8IWG1 891 aa22.95■■□□□ 1.26
MBD4-202ENST00000393278 RGPD1P0DJD0 1748 aa22.94■■□□□ 1.26
MBD4-202ENST00000393278 SLIT3O75094 1523 aa22.93■■□□□ 1.26
MBD4-202ENST00000393278 NEFMP07197 916 aa22.93■■□□□ 1.26
MBD4-202ENST00000393278 KCNH5Q8NCM2 988 aa22.93■■□□□ 1.26
MBD4-202ENST00000393278 RTL1A6NKG5 1358 aa22.93■■□□□ 1.26
MBD4-202ENST00000393278 NPHP3Q7Z494 1330 aa22.92■■□□□ 1.26
MBD4-202ENST00000393278 ALS2Q96Q42 1657 aa22.92■■□□□ 1.26
MBD4-202ENST00000393278 HOXC9P31274 260 aa22.91■■□□□ 1.26
MBD4-202ENST00000393278 USP19O94966 1318 aa22.91■■□□□ 1.26
MBD4-202ENST00000393278 ARHGEF10O15013 1369 aa22.9■■□□□ 1.26
MBD4-202ENST00000393278 IRX6P78412 446 aaPredicted RBP22.9■■□□□ 1.26
MBD4-202ENST00000393278 TRIM35Q9UPQ4 493 aa22.9■■□□□ 1.26
MBD4-202ENST00000393278 LTN1O94822 1766 aa22.89■■□□□ 1.26
MBD4-202ENST00000393278 RIPK4P57078 832 aa22.89■■□□□ 1.25
MBD4-202ENST00000393278 ERICH6BQ5W0A0 696 aa22.89■■□□□ 1.25
MBD4-202ENST00000393278 PHACTR3Q96KR7 559 aa22.89■■□□□ 1.25
MBD4-202ENST00000393278 PHRF1Q9P1Y6 1649 aaKnown RBP22.89■■□□□ 1.25
MBD4-202ENST00000393278 NFE2L2Q16236 605 aa22.87■■□□□ 1.25
MBD4-202ENST00000393278 SULT6B1Q6IMI4 303 aa22.87■■□□□ 1.25
MBD4-202ENST00000393278 BRINP3Q76B58 766 aa22.87■■□□□ 1.25
MBD4-202ENST00000393278 DDX17Q92841 729 aaKnown RBP22.87■■□□□ 1.25
MBD4-202ENST00000393278 PXDNQ92626 1479 aa22.87■■□□□ 1.25
MBD4-202ENST00000393278 GCP02774 474 aa22.87■■□□□ 1.25
MBD4-202ENST00000393278 LMOD2Q6P5Q4 547 aa22.87■■□□□ 1.25
MBD4-202ENST00000393278 AEBP1Q8IUX7 1158 aa22.87■■□□□ 1.25
MBD4-202ENST00000393278 RRP1P56182 461 aaKnown RBP22.86■■□□□ 1.25
MBD4-202ENST00000393278 SLAIN2Q9P270 581 aa22.86■■□□□ 1.25
MBD4-202ENST00000393278 IGSF1Q8N6C5 1336 aa22.85■■□□□ 1.25
MBD4-202ENST00000393278 IP6K1Q92551 441 aa22.85■■□□□ 1.25
MBD4-202ENST00000393278 TNS3Q68CZ2 1445 aa22.84■■□□□ 1.25
MBD4-202ENST00000393278 EYA1Q99502 592 aa22.84■■□□□ 1.25
MBD4-202ENST00000393278 KDRP35968 1356 aa22.83■■□□□ 1.25
MBD4-202ENST00000393278 IL16Q14005 1332 aa22.83■■□□□ 1.25
MBD4-202ENST00000393278 ARHGEF25Q86VW2 580 aa22.82■■□□□ 1.24
MBD4-202ENST00000393278 MYH16Q9H6N6 1097 aa22.82■■□□□ 1.24
MBD4-202ENST00000393278 MED1Q15648 1581 aaPredicted RBP22.82■■□□□ 1.24
MBD4-202ENST00000393278 SPATA31A3Q5VYP0 1347 aa22.81■■□□□ 1.24
MBD4-202ENST00000393278 LMOD3Q0VAK6 560 aa22.78■■□□□ 1.24
MBD4-202ENST00000393278 DLG5Q8TDM6 1919 aa22.77■■□□□ 1.24
MBD4-202ENST00000393278 LTV1Q96GA3 475 aaPredicted RBP22.77■■□□□ 1.24
MBD4-202ENST00000393278 SOS2Q07890 1332 aaPredicted RBP22.77■■□□□ 1.23
MBD4-202ENST00000393278 PLEKHG5O94827 1062 aa22.76■■□□□ 1.23
MBD4-202ENST00000393278 FANCIQ9NVI1 1328 aa22.76■■□□□ 1.23
MBD4-202ENST00000393278 LTBP4Q8N2S1 1624 aa22.76■■□□□ 1.23
MBD4-202ENST00000393278 ZBTB7CA1YPR0 619 aa22.75■■□□□ 1.23
MBD4-202ENST00000393278 CRYBG1Q9Y4K1 1723 aa22.75■■□□□ 1.23
MBD4-202ENST00000393278 CALD1Q05682 793 aaKnown RBP22.74■■□□□ 1.23
MBD4-202ENST00000393278 PPP4R2Q9NY27 417 aa22.73■■□□□ 1.23
MBD4-202ENST00000393278 NHSL1Q5SYE7 1610 aa22.73■■□□□ 1.23
MBD4-202ENST00000393278 TSR2Q969E8 191 aaKnown RBP22.72■■□□□ 1.23
MBD4-202ENST00000393278 PLIN1O60240 522 aa22.71■■□□□ 1.23
MBD4-202ENST00000393278 THUMPD2Q9BTF0 503 aaKnown RBP22.71■■□□□ 1.23
MBD4-202ENST00000393278 CT47B1P0C2W7 299 aaPredicted RBP22.7■■□□□ 1.22
MBD4-202ENST00000393278 ZC3H6P61129 1189 aaKnown RBP22.7■■□□□ 1.22
MBD4-202ENST00000393278 MTHFSDQ2M296 383 aaKnown RBP22.69■■□□□ 1.22
MBD4-202ENST00000393278 NBPF6Q5VWK0 638 aa22.69■■□□□ 1.22
MBD4-202ENST00000393278 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.69■■□□□ 1.22
MBD4-202ENST00000393278 GAS2L2Q8NHY3 880 aa22.69■■□□□ 1.22
MBD4-202ENST00000393278 NBPF4Q96M43 638 aa22.69■■□□□ 1.22
MBD4-202ENST00000393278 IFT57Q9NWB7 429 aa22.69■■□□□ 1.22
MBD4-202ENST00000393278 NCAPD2Q15021 1401 aa22.69■■□□□ 1.22
MBD4-202ENST00000393278 FAM83GA6ND36 823 aa22.68■■□□□ 1.22
MBD4-202ENST00000393278 CABLES1Q8TDN4 633 aa22.68■■□□□ 1.22
MBD4-202ENST00000393278 AXIN2Q9Y2T1 843 aa22.68■■□□□ 1.22
MBD4-202ENST00000393278 ABCC6O95255 1503 aa22.68■■□□□ 1.22
MBD4-202ENST00000393278 BCAR3O75815 825 aa22.68■■□□□ 1.22
MBD4-202ENST00000393278 ZNF853P0CG23 659 aa22.68■■□□□ 1.22
MBD4-202ENST00000393278 ANKRD24Q8TF21 1146 aa22.68■■□□□ 1.22
MBD4-202ENST00000393278 CPDO75976 1380 aa22.67■■□□□ 1.22
MBD4-202ENST00000393278 RARSP54136 660 aaKnown RBP22.67■■□□□ 1.22
MBD4-202ENST00000393278 GNAI1P63096 354 aa22.67■■□□□ 1.22
MBD4-202ENST00000393278 EXOSC9Q06265 439 aaKnown RBP22.67■■□□□ 1.22
MBD4-202ENST00000393278 USHBP1Q8N6Y0 703 aa22.67■■□□□ 1.22
MBD4-202ENST00000393278 CAMTA1Q9Y6Y1 1673 aa22.67■■□□□ 1.22
MBD4-202ENST00000393278 RGPD2P0DJD1 1756 aa22.66■■□□□ 1.22
MBD4-202ENST00000393278 COL18A1P39060 1754 aa22.66■■□□□ 1.22
MBD4-202ENST00000393278 DCTN1Q14203 1278 aa22.65■■□□□ 1.22
MBD4-202ENST00000393278 LRRC59Q96AG4 307 aaKnown RBP22.65■■□□□ 1.22
MBD4-202ENST00000393278 CFAP44Q96MT7 982 aa22.65■■□□□ 1.22
MBD4-202ENST00000393278 RGPD5Q99666 1765 aa22.64■■□□□ 1.22
MBD4-202ENST00000393278 ERBB3P21860 1342 aa22.64■■□□□ 1.21
MBD4-202ENST00000393278 LAS1LQ9Y4W2 734 aaKnown RBP22.64■■□□□ 1.21
MBD4-202ENST00000393278 EXOC6Q8TAG9 804 aa22.62■■□□□ 1.21
MBD4-202ENST00000393278 KIAA0232Q92628 1395 aa22.62■■□□□ 1.21
MBD4-202ENST00000393278 HTATSF1O43719 755 aaKnown RBP22.62■■□□□ 1.21
MBD4-202ENST00000393278 C20orf194Q5TEA3 1177 aa22.62■■□□□ 1.21
MBD4-202ENST00000393278 MCM10Q7L590 875 aa22.62■■□□□ 1.21
MBD4-202ENST00000393278 MBIPQ9NS73 344 aa22.62■■□□□ 1.21
MBD4-202ENST00000393278 LMO7Q8WWI1 1683 aa22.61■■□□□ 1.21
MBD4-202ENST00000393278 ROBO1Q9Y6N7 1651 aa22.61■■□□□ 1.21
MBD4-202ENST00000393278 RTF1Q92541 710 aaKnown RBP22.61■■□□□ 1.21
MBD4-202ENST00000393278 ABCA3Q99758 1704 aa22.6■■□□□ 1.21
MBD4-202ENST00000393278 CRB1P82279 1406 aa22.6■■□□□ 1.21
MBD4-202ENST00000393278 CRBNQ96SW2 442 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms