RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 LMOD2Q6P5Q4 547 aa19.54■□□□□ 0.72
MKS1-202ENST00000393119 BCL2L13Q9BXK5 485 aa19.54■□□□□ 0.72
MKS1-202ENST00000393119 CRBNQ96SW2 442 aa19.54■□□□□ 0.72
MKS1-202ENST00000393119 FAM83GA6ND36 823 aa19.52■□□□□ 0.72
MKS1-202ENST00000393119 CCDC27Q2M243 656 aa19.52■□□□□ 0.72
MKS1-202ENST00000393119 LTV1Q96GA3 475 aaPredicted RBP19.52■□□□□ 0.72
MKS1-202ENST00000393119 STRCP1A6NGW2 1772 aa19.52■□□□□ 0.72
MKS1-202ENST00000393119 DCTN1Q14203 1278 aa19.52■□□□□ 0.72
MKS1-202ENST00000393119 WDR63Q8IWG1 891 aa19.52■□□□□ 0.72
MKS1-202ENST00000393119 AMPHP49418 695 aa19.51■□□□□ 0.71
MKS1-202ENST00000393119 C19orf44Q9H6X5 657 aa19.51■□□□□ 0.71
MKS1-202ENST00000393119 LAS1LQ9Y4W2 734 aaKnown RBP19.51■□□□□ 0.71
MKS1-202ENST00000393119 LMTK3Q96Q04 1460 aa19.51■□□□□ 0.71
MKS1-202ENST00000393119 ERICH6BQ5W0A0 696 aa19.5■□□□□ 0.71
MKS1-202ENST00000393119 NGEFQ8N5V2 710 aa19.5■□□□□ 0.71
MKS1-202ENST00000393119 TNNQ9UQP3 1299 aa19.5■□□□□ 0.71
MKS1-202ENST00000393119 NWD1Q149M9 1564 aa19.49■□□□□ 0.71
MKS1-202ENST00000393119 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
MKS1-202ENST00000393119 ZNF335Q9H4Z2 1342 aaPredicted RBP19.48■□□□□ 0.71
MKS1-202ENST00000393119 FANCIQ9NVI1 1328 aa19.48■□□□□ 0.71
MKS1-202ENST00000393119 EXOSC9Q06265 439 aaKnown RBP19.47■□□□□ 0.71
MKS1-202ENST00000393119 NFE2L2Q16236 605 aa19.47■□□□□ 0.71
MKS1-202ENST00000393119 EYA1Q99502 592 aa19.46■□□□□ 0.71
MKS1-202ENST00000393119 C1orf167Q5SNV9 1468 aa19.46■□□□□ 0.71
MKS1-202ENST00000393119 MSH5O43196 834 aa19.46■□□□□ 0.71
MKS1-202ENST00000393119 ATF3P18847 181 aa19.46■□□□□ 0.71
MKS1-202ENST00000393119 HOXC9P31274 260 aa19.46■□□□□ 0.71
MKS1-202ENST00000393119 USHBP1Q8N6Y0 703 aa19.46■□□□□ 0.71
MKS1-202ENST00000393119 FRAT1Q92837 279 aaPredicted RBP19.46■□□□□ 0.71
MKS1-202ENST00000393119 KRT28Q7Z3Y7 464 aa19.45■□□□□ 0.7
MKS1-202ENST00000393119 RARSP54136 660 aaKnown RBP19.44■□□□□ 0.7
MKS1-202ENST00000393119 MARF1Q9Y4F3 1742 aaKnown RBP19.44■□□□□ 0.7
MKS1-202ENST00000393119 SBNO1A3KN83 1393 aa19.43■□□□□ 0.7
MKS1-202ENST00000393119 NEFMP07197 916 aa19.43■□□□□ 0.7
MKS1-202ENST00000393119 PNNQ9H307 717 aaKnown RBP19.43■□□□□ 0.7
MKS1-202ENST00000393119 FLT4P35916 1363 aa19.43■□□□□ 0.7
MKS1-202ENST00000393119 SKAP1Q86WV1 359 aa19.43■□□□□ 0.7
MKS1-202ENST00000393119 PANK1Q8TE04 598 aa19.42■□□□□ 0.7
MKS1-202ENST00000393119 MYH16Q9H6N6 1097 aa19.42■□□□□ 0.7
MKS1-202ENST00000393119 ELL2O00472 640 aaPredicted RBP19.41■□□□□ 0.7
MKS1-202ENST00000393119 MCM10Q7L590 875 aa19.41■□□□□ 0.7
MKS1-202ENST00000393119 STRCQ7RTU9 1775 aa19.41■□□□□ 0.7
MKS1-202ENST00000393119 CABLES1Q8TDN4 633 aa19.4■□□□□ 0.7
MKS1-202ENST00000393119 MST1RQ04912 1400 aa19.4■□□□□ 0.7
MKS1-202ENST00000393119 TCERG1O14776 1098 aaKnown RBP19.39■□□□□ 0.69
MKS1-202ENST00000393119 GCP02774 474 aa19.39■□□□□ 0.69
MKS1-202ENST00000393119 CLUAP1Q96AJ1 413 aa19.39■□□□□ 0.69
MKS1-202ENST00000393119 MTHFSDQ2M296 383 aaKnown RBP19.39■□□□□ 0.69
MKS1-202ENST00000393119 TSPYL6Q8N831 410 aa19.38■□□□□ 0.69
MKS1-202ENST00000393119 LRRC59Q96AG4 307 aaKnown RBP19.38■□□□□ 0.69
MKS1-202ENST00000393119 RLBP1P12271 317 aa19.37■□□□□ 0.69
MKS1-202ENST00000393119 NCBP3Q53F19 620 aaKnown RBP19.37■□□□□ 0.69
MKS1-202ENST00000393119 ZC3H6P61129 1189 aaKnown RBP19.37■□□□□ 0.69
MKS1-202ENST00000393119 MIS18AQ9NYP9 233 aa19.37■□□□□ 0.69
MKS1-202ENST00000393119 CANXP27824 592 aaKnown RBP19.36■□□□□ 0.69
MKS1-202ENST00000393119 AXIN2Q9Y2T1 843 aa19.36■□□□□ 0.69
MKS1-202ENST00000393119 COG6Q9Y2V7 657 aa19.36■□□□□ 0.69
MKS1-202ENST00000393119 KRT24Q2M2I5 525 aa19.36■□□□□ 0.69
MKS1-202ENST00000393119 MBIPQ9NS73 344 aa19.36■□□□□ 0.69
MKS1-202ENST00000393119 NBPF6Q5VWK0 638 aa19.35■□□□□ 0.69
MKS1-202ENST00000393119 SSH1Q8WYL5 1049 aa19.35■□□□□ 0.69
MKS1-202ENST00000393119 NBPF4Q96M43 638 aa19.35■□□□□ 0.69
MKS1-202ENST00000393119 IGSF1Q8N6C5 1336 aa19.35■□□□□ 0.69
MKS1-202ENST00000393119 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.34■□□□□ 0.69
MKS1-202ENST00000393119 CADPS2Q86UW7 1296 aa19.33■□□□□ 0.69
MKS1-202ENST00000393119 IP6K1Q92551 441 aa19.33■□□□□ 0.69
MKS1-202ENST00000393119 NFAT5O94916 1531 aa19.33■□□□□ 0.69
MKS1-202ENST00000393119 IL16Q14005 1332 aa19.33■□□□□ 0.69
MKS1-202ENST00000393119 RGPD1P0DJD0 1748 aa19.33■□□□□ 0.68
MKS1-202ENST00000393119 MSH6P52701 1360 aa19.32■□□□□ 0.68
MKS1-202ENST00000393119 C8orf58Q8NAV2 365 aa19.32■□□□□ 0.68
MKS1-202ENST00000393119 SMC4Q9NTJ3 1288 aa19.32■□□□□ 0.68
MKS1-202ENST00000393119 ARHGEF10O15013 1369 aa19.32■□□□□ 0.68
MKS1-202ENST00000393119 ZNF853P0CG23 659 aa19.31■□□□□ 0.68
MKS1-202ENST00000393119 BRINP3Q76B58 766 aa19.31■□□□□ 0.68
MKS1-202ENST00000393119 ARHGEF25Q86VW2 580 aa19.31■□□□□ 0.68
MKS1-202ENST00000393119 DLG5Q8TDM6 1919 aa19.31■□□□□ 0.68
MKS1-202ENST00000393119 KCNH5Q8NCM2 988 aa19.29■□□□□ 0.68
MKS1-202ENST00000393119 KDRP35968 1356 aa19.29■□□□□ 0.68
MKS1-202ENST00000393119 XIRP1Q702N8 1843 aaKnown RBP19.29■□□□□ 0.68
MKS1-202ENST00000393119 CFAP44Q96MT7 982 aa19.28■□□□□ 0.68
MKS1-202ENST00000393119 IFT57Q9NWB7 429 aa19.28■□□□□ 0.68
MKS1-202ENST00000393119 NOB1Q9ULX3 412 aaKnown RBP19.28■□□□□ 0.68
MKS1-202ENST00000393119 CHRNA2Q15822 529 aa19.28■□□□□ 0.68
MKS1-202ENST00000393119 LTN1O94822 1766 aa19.28■□□□□ 0.68
MKS1-202ENST00000393119 TRPM3Q9HCF6 1732 aaPredicted RBP19.28■□□□□ 0.68
MKS1-202ENST00000393119 VAMP4O75379 141 aa19.27■□□□□ 0.68
MKS1-202ENST00000393119 GNAI1P63096 354 aa19.27■□□□□ 0.68
MKS1-202ENST00000393119 SLAIN2Q9P270 581 aa19.27■□□□□ 0.68
MKS1-202ENST00000393119 USP19O94966 1318 aa19.26■□□□□ 0.67
MKS1-202ENST00000393119 ANKRD24Q8TF21 1146 aa19.26■□□□□ 0.67
MKS1-202ENST00000393119 MED1Q15648 1581 aaPredicted RBP19.25■□□□□ 0.67
MKS1-202ENST00000393119 TRIM27P14373 513 aa19.25■□□□□ 0.67
MKS1-202ENST00000393119 LMOD3Q0VAK6 560 aa19.25■□□□□ 0.67
MKS1-202ENST00000393119 USP54Q70EL1 1684 aa19.25■□□□□ 0.67
MKS1-202ENST00000393119 PDE3AQ14432 1141 aa19.24■□□□□ 0.67
MKS1-202ENST00000393119 NPHP3Q7Z494 1330 aa19.24■□□□□ 0.67
MKS1-202ENST00000393119 DCCP43146 1447 aa19.24■□□□□ 0.67
MKS1-202ENST00000393119 TWISTNBQ3B726 338 aaPredicted RBP19.24■□□□□ 0.67
MKS1-202ENST00000393119 IGHDP01880 384 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms