RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 KIF1AQ12756 1690 aa27.8■■■□□ 2.04
SPHK1-202ENST00000392496 DCCP43146 1447 aa27.8■■■□□ 2.04
SPHK1-202ENST00000392496 LTBP4Q8N2S1 1624 aa27.8■■■□□ 2.04
SPHK1-202ENST00000392496 MSH6P52701 1360 aa27.8■■■□□ 2.04
SPHK1-202ENST00000392496 NFE2L2Q16236 605 aa27.79■■■□□ 2.04
SPHK1-202ENST00000392496 HSP90AB2PQ58FF8 381 aa27.79■■■□□ 2.04
SPHK1-202ENST00000392496 C1orf167Q5SNV9 1468 aa27.79■■■□□ 2.04
SPHK1-202ENST00000392496 SOX12O15370 315 aa27.78■■■□□ 2.04
SPHK1-202ENST00000392496 PLIN1O60240 522 aa27.78■■■□□ 2.04
SPHK1-202ENST00000392496 B4GALNT3Q6L9W6 998 aa27.78■■■□□ 2.04
SPHK1-202ENST00000392496 PHACTR3Q96KR7 559 aa27.77■■■□□ 2.04
SPHK1-202ENST00000392496 ORAI2Q96SN7 254 aa27.77■■■□□ 2.04
SPHK1-202ENST00000392496 ATF3P18847 181 aa27.76■■■□□ 2.03
SPHK1-202ENST00000392496 AMPHP49418 695 aa27.75■■■□□ 2.03
SPHK1-202ENST00000392496 EXOC6Q8TAG9 804 aa27.75■■■□□ 2.03
SPHK1-202ENST00000392496 NUTM2GQ5VZR2 741 aa27.74■■■□□ 2.03
SPHK1-202ENST00000392496 ARHGEF10O15013 1369 aa27.74■■■□□ 2.03
SPHK1-202ENST00000392496 CADPS2Q86UW7 1296 aa27.73■■■□□ 2.03
SPHK1-202ENST00000392496 MST1RQ04912 1400 aa27.72■■■□□ 2.03
SPHK1-202ENST00000392496 CT47B1P0C2W7 299 aaPredicted RBP27.71■■■□□ 2.03
SPHK1-202ENST00000392496 SULT6B1Q6IMI4 303 aa27.71■■■□□ 2.03
SPHK1-202ENST00000392496 CCDC136Q96JN2 1154 aa27.71■■■□□ 2.03
SPHK1-202ENST00000392496 TRPM3Q9HCF6 1732 aaPredicted RBP27.7■■■□□ 2.03
SPHK1-202ENST00000392496 FANCIQ9NVI1 1328 aa27.7■■■□□ 2.03
SPHK1-202ENST00000392496 RTL1A6NKG5 1358 aa27.7■■■□□ 2.03
SPHK1-202ENST00000392496 FOXO3O43524 673 aa27.7■■■□□ 2.02
SPHK1-202ENST00000392496 NFAT5O94916 1531 aa27.69■■■□□ 2.02
SPHK1-202ENST00000392496 CALD1Q05682 793 aaKnown RBP27.69■■■□□ 2.02
SPHK1-202ENST00000392496 LMOD3Q0VAK6 560 aa27.69■■■□□ 2.02
SPHK1-202ENST00000392496 CERKQ8TCT0 537 aa27.69■■■□□ 2.02
SPHK1-202ENST00000392496 DLG5Q8TDM6 1919 aa27.69■■■□□ 2.02
SPHK1-202ENST00000392496 BCAR3O75815 825 aa27.68■■■□□ 2.02
SPHK1-202ENST00000392496 HOXC9P31274 260 aa27.68■■■□□ 2.02
SPHK1-202ENST00000392496 AEBP1Q8IUX7 1158 aa27.68■■■□□ 2.02
SPHK1-202ENST00000392496 KCNH5Q8NCM2 988 aa27.68■■■□□ 2.02
SPHK1-202ENST00000392496 CRBNQ96SW2 442 aa27.68■■■□□ 2.02
SPHK1-202ENST00000392496 LTN1O94822 1766 aa27.67■■■□□ 2.02
SPHK1-202ENST00000392496 RARSP54136 660 aaKnown RBP27.66■■■□□ 2.02
SPHK1-202ENST00000392496 KDRP35968 1356 aa27.66■■■□□ 2.02
SPHK1-202ENST00000392496 C20orf194Q5TEA3 1177 aa27.65■■■□□ 2.02
SPHK1-202ENST00000392496 KRT28Q7Z3Y7 464 aa27.65■■■□□ 2.02
SPHK1-202ENST00000392496 IGSF1Q8N6C5 1336 aa27.65■■■□□ 2.02
SPHK1-202ENST00000392496 XIRP1Q702N8 1843 aaKnown RBP27.65■■■□□ 2.02
SPHK1-202ENST00000392496 PHRF1Q9P1Y6 1649 aaKnown RBP27.64■■■□□ 2.02
SPHK1-202ENST00000392496 SLIT3O75094 1523 aa27.64■■■□□ 2.02
SPHK1-202ENST00000392496 TOM1O60784 492 aa27.64■■■□□ 2.02
SPHK1-202ENST00000392496 TSR2Q969E8 191 aaKnown RBP27.64■■■□□ 2.02
SPHK1-202ENST00000392496 EXOSC9Q06265 439 aaKnown RBP27.61■■■□□ 2.01
SPHK1-202ENST00000392496 EYA1Q99502 592 aa27.61■■■□□ 2.01
SPHK1-202ENST00000392496 XPCQ01831 940 aaPredicted RBP27.6■■■□□ 2.01
SPHK1-202ENST00000392496 IP6K1Q92551 441 aa27.6■■■□□ 2.01
SPHK1-202ENST00000392496 PDE3AQ14432 1141 aa27.6■■■□□ 2.01
SPHK1-202ENST00000392496 IFT57Q9NWB7 429 aa27.6■■■□□ 2.01
SPHK1-202ENST00000392496 USP19O94966 1318 aa27.59■■■□□ 2.01
SPHK1-202ENST00000392496 ALS2Q96Q42 1657 aa27.59■■■□□ 2.01
SPHK1-202ENST00000392496 GNAI1P63096 354 aa27.58■■■□□ 2.01
SPHK1-202ENST00000392496 ZNF853P0CG23 659 aa27.57■■■□□ 2
SPHK1-202ENST00000392496 SLAIN2Q9P270 581 aa27.57■■■□□ 2
SPHK1-202ENST00000392496 GCP02774 474 aa27.55■■■□□ 2
SPHK1-202ENST00000392496 UBAP1LF5GYI3 381 aa27.55■■■□□ 2
SPHK1-202ENST00000392496 THUMPD2Q9BTF0 503 aaKnown RBP27.55■■■□□ 2
SPHK1-202ENST00000392496 CANXP27824 592 aaKnown RBP27.54■■■□□ 2
SPHK1-202ENST00000392496 NPHP3Q7Z494 1330 aa27.54■■■□□ 2
SPHK1-202ENST00000392496 CFAP44Q96MT7 982 aa27.53■■■□□ 2
SPHK1-202ENST00000392496 LMOD2Q6P5Q4 547 aa27.52■■■□□ 2
SPHK1-202ENST00000392496 ARHGEF25Q86VW2 580 aa27.52■■■□□ 2
SPHK1-202ENST00000392496 TSHZ2Q9NRE2 1034 aa27.52■■■□□ 2
SPHK1-202ENST00000392496 ZNF428Q96B54 188 aa27.51■■□□□ 1.99
SPHK1-202ENST00000392496 LAS1LQ9Y4W2 734 aaKnown RBP27.51■■□□□ 1.99
SPHK1-202ENST00000392496 FAM83GA6ND36 823 aa27.5■■□□□ 1.99
SPHK1-202ENST00000392496 GAS2L2Q8NHY3 880 aa27.5■■□□□ 1.99
SPHK1-202ENST00000392496 FRAT1Q92837 279 aaPredicted RBP27.5■■□□□ 1.99
SPHK1-202ENST00000392496 LTV1Q96GA3 475 aaPredicted RBP27.49■■□□□ 1.99
SPHK1-202ENST00000392496 MTHFSDQ2M296 383 aaKnown RBP27.48■■□□□ 1.99
SPHK1-202ENST00000392496 MBIPQ9NS73 344 aa27.48■■□□□ 1.99
SPHK1-202ENST00000392496 ALDH1L2Q3SY69 923 aa27.48■■□□□ 1.99
SPHK1-202ENST00000392496 BCL2L13Q9BXK5 485 aa27.48■■□□□ 1.99
SPHK1-202ENST00000392496 PXDNQ92626 1479 aa27.47■■□□□ 1.99
SPHK1-202ENST00000392496 DCTN1Q14203 1278 aa27.47■■□□□ 1.99
SPHK1-202ENST00000392496 SMC4Q9NTJ3 1288 aa27.47■■□□□ 1.99
SPHK1-202ENST00000392496 MED1Q15648 1581 aaPredicted RBP27.46■■□□□ 1.99
SPHK1-202ENST00000392496 SSH1Q8WYL5 1049 aa27.46■■□□□ 1.99
SPHK1-202ENST00000392496 TNS3Q68CZ2 1445 aa27.46■■□□□ 1.99
SPHK1-202ENST00000392496 HTATSF1O43719 755 aaKnown RBP27.45■■□□□ 1.98
SPHK1-202ENST00000392496 MS4A1P11836 297 aa27.45■■□□□ 1.98
SPHK1-202ENST00000392496 ZKSCAN2Q63HK3 967 aa27.44■■□□□ 1.98
SPHK1-202ENST00000392496 ZBTB7CA1YPR0 619 aa27.43■■□□□ 1.98
SPHK1-202ENST00000392496 PIP4K2BP78356 416 aa27.43■■□□□ 1.98
SPHK1-202ENST00000392496 PANK1Q8TE04 598 aa27.43■■□□□ 1.98
SPHK1-202ENST00000392496 DDX17Q92841 729 aaKnown RBP27.43■■□□□ 1.98
SPHK1-202ENST00000392496 BRPF1P55201 1214 aaPredicted RBP27.42■■□□□ 1.98
SPHK1-202ENST00000392496 AAMPQ13685 434 aa27.42■■□□□ 1.98
SPHK1-202ENST00000392496 BRINP3Q76B58 766 aa27.42■■□□□ 1.98
SPHK1-202ENST00000392496 MCM10Q7L590 875 aa27.42■■□□□ 1.98
SPHK1-202ENST00000392496 RTF1Q92541 710 aaKnown RBP27.42■■□□□ 1.98
SPHK1-202ENST00000392496 CRB1P82279 1406 aa27.42■■□□□ 1.98
SPHK1-202ENST00000392496 VAMP4O75379 141 aa27.41■■□□□ 1.98
SPHK1-202ENST00000392496 SPATA31A3Q5VYP0 1347 aa27.41■■□□□ 1.98
SPHK1-202ENST00000392496 CHL1O00533 1208 aa27.4■■□□□ 1.98
SPHK1-202ENST00000392496 NBPF6Q5VWK0 638 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms