RNA–Protein interactions for RNA: ENST00000392270.3

RAET1E-203, retinoic acid early transcript 1E, humanhuman

TSL 2

Gene RAET1E, Length 743 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAET1E-203ENST00000392270 FAM83GA6ND36 823 aa13.36□□□□□ -0.27
RAET1E-203ENST00000392270 MYT1Q01538 1121 aa13.36□□□□□ -0.27
RAET1E-203ENST00000392270 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
RAET1E-203ENST00000392270 DHX57Q6P158 1386 aaKnown RBP13.35□□□□□ -0.27
RAET1E-203ENST00000392270 ALS2Q96Q42 1657 aa13.35□□□□□ -0.27
RAET1E-203ENST00000392270 PSDA5PKW4 1024 aaPredicted RBP13.35□□□□□ -0.27
RAET1E-203ENST00000392270 PSME1Q06323 249 aa13.35□□□□□ -0.27
RAET1E-203ENST00000392270 SF3B2Q13435 895 aaKnown RBP13.35□□□□□ -0.27
RAET1E-203ENST00000392270 KRT27Q7Z3Y8 459 aa13.35□□□□□ -0.27
RAET1E-203ENST00000392270 ZNF467Q7Z7K2 595 aaPredicted RBP13.35□□□□□ -0.27
RAET1E-203ENST00000392270 CRYBG1Q9Y4K1 1723 aa13.34□□□□□ -0.27
RAET1E-203ENST00000392270 LRP5O75197 1615 aa13.34□□□□□ -0.27
RAET1E-203ENST00000392270 FAM98CQ17RN3 349 aaKnown RBP13.33□□□□□ -0.28
RAET1E-203ENST00000392270 FAM182BQ5T319 152 aa13.33□□□□□ -0.28
RAET1E-203ENST00000392270 SIRT1Q96EB6 747 aa13.33□□□□□ -0.28
RAET1E-203ENST00000392270 HIRIP3Q9BW71 556 aaPredicted RBP13.33□□□□□ -0.28
RAET1E-203ENST00000392270 ARHGEF10O15013 1369 aa13.32□□□□□ -0.28
RAET1E-203ENST00000392270 ADGRB2O60241 1585 aa13.32□□□□□ -0.28
RAET1E-203ENST00000392270 COL14A1Q05707 1796 aaKnown RBP13.32□□□□□ -0.28
RAET1E-203ENST00000392270 CCER1Q8TC90 406 aaPredicted RBP13.32□□□□□ -0.28
RAET1E-203ENST00000392270 POGKQ9P215 609 aa13.32□□□□□ -0.28
RAET1E-203ENST00000392270 DLC1Q96QB1 1528 aa13.32□□□□□ -0.28
RAET1E-203ENST00000392270 CLSPNQ9HAW4 1339 aa13.32□□□□□ -0.28
RAET1E-203ENST00000392270 RGPD1P0DJD0 1748 aa13.31□□□□□ -0.28
RAET1E-203ENST00000392270 ONECUT3O60422 494 aaPredicted RBP13.31□□□□□ -0.28
RAET1E-203ENST00000392270 PDCD7Q8N8D1 485 aaKnown RBP13.31□□□□□ -0.28
RAET1E-203ENST00000392270 BTG4Q9NY30 223 aa13.31□□□□□ -0.28
RAET1E-203ENST00000392270 ADGRB1O14514 1584 aa13.31□□□□□ -0.28
RAET1E-203ENST00000392270 MINK1Q8N4C8 1332 aaPredicted RBP13.31□□□□□ -0.28
RAET1E-203ENST00000392270 PRR36Q9H6K5 1346 aa13.31□□□□□ -0.28
RAET1E-203ENST00000392270 ANKARQ7Z5J8 1434 aa13.3□□□□□ -0.28
RAET1E-203ENST00000392270 TNS1Q9HBL0 1735 aaKnown RBP13.3□□□□□ -0.28
RAET1E-203ENST00000392270 ST18O60284 1047 aa13.3□□□□□ -0.28
RAET1E-203ENST00000392270 TRAK1Q9UPV9 953 aa13.3□□□□□ -0.28
RAET1E-203ENST00000392270 THSD7AQ9UPZ6 1657 aa13.28□□□□□ -0.28
RAET1E-203ENST00000392270 EN1Q05925 392 aaPredicted RBP13.28□□□□□ -0.28
RAET1E-203ENST00000392270 IFNLR1Q8IU57 520 aaPredicted RBP13.28□□□□□ -0.28
RAET1E-203ENST00000392270 TULP4Q9NRJ4 1543 aa13.28□□□□□ -0.28
RAET1E-203ENST00000392270 BAG6P46379 1132 aa13.27□□□□□ -0.29
RAET1E-203ENST00000392270 KDM2AQ9Y2K7 1162 aa13.27□□□□□ -0.29
RAET1E-203ENST00000392270 PHRF1Q9P1Y6 1649 aaKnown RBP13.27□□□□□ -0.29
RAET1E-203ENST00000392270 ARHGEF28Q8N1W1 1705 aaKnown RBP13.27□□□□□ -0.29
RAET1E-203ENST00000392270 GPRASP1Q5JY77 1395 aa13.26□□□□□ -0.29
RAET1E-203ENST00000392270 STAC3Q96MF2 364 aa13.26□□□□□ -0.29
RAET1E-203ENST00000392270 ITSN1Q15811 1721 aa13.25□□□□□ -0.29
RAET1E-203ENST00000392270 SPATA31A5Q5VU36 1347 aa13.25□□□□□ -0.29
RAET1E-203ENST00000392270 SPATA31A7Q8IWB4 1347 aa13.25□□□□□ -0.29
RAET1E-203ENST00000392270 PSEN1P49768 467 aa13.24□□□□□ -0.29
RAET1E-203ENST00000392270 NEUROD1Q13562 356 aa13.24□□□□□ -0.29
RAET1E-203ENST00000392270 R3HDM1Q15032 1099 aaKnown RBP13.24□□□□□ -0.29
RAET1E-203ENST00000392270 CHRNA2Q15822 529 aa13.24□□□□□ -0.29
RAET1E-203ENST00000392270 TONSLQ96HA7 1378 aa13.23□□□□□ -0.29
RAET1E-203ENST00000392270 WASLO00401 505 aaPredicted RBP13.23□□□□□ -0.29
RAET1E-203ENST00000392270 NUTM2GQ5VZR2 741 aa13.23□□□□□ -0.29
RAET1E-203ENST00000392270 NGDNQ8NEJ9 315 aaKnown RBP13.23□□□□□ -0.29
RAET1E-203ENST00000392270 PRDM11Q9NQV5 511 aa13.23□□□□□ -0.29
RAET1E-203ENST00000392270 EZH2Q15910 746 aaKnown RBP13.22□□□□□ -0.29
RAET1E-203ENST00000392270 DCAF11Q8TEB1 546 aa13.22□□□□□ -0.29
RAET1E-203ENST00000392270 STRN4Q9NRL3 753 aa13.22□□□□□ -0.29
RAET1E-203ENST00000392270 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.22□□□□□ -0.29
RAET1E-203ENST00000392270 KIAA0232Q92628 1395 aa13.21□□□□□ -0.29
RAET1E-203ENST00000392270 CDAN1Q8IWY9 1227 aa13.21□□□□□ -0.29
RAET1E-203ENST00000392270 SPOCK2Q92563 424 aa13.21□□□□□ -0.29
RAET1E-203ENST00000392270 ATP7BP35670 1465 aa13.21□□□□□ -0.3
RAET1E-203ENST00000392270 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.3
RAET1E-203ENST00000392270 EIF3AQ14152 1382 aaKnown RBP13.2□□□□□ -0.3
RAET1E-203ENST00000392270 SPATA31A1Q5TZJ5 1347 aa13.2□□□□□ -0.3
RAET1E-203ENST00000392270 TRIM37O94972 964 aa13.2□□□□□ -0.3
RAET1E-203ENST00000392270 ZC3H6P61129 1189 aaKnown RBP13.2□□□□□ -0.3
RAET1E-203ENST00000392270 USP35Q9P2H5 1018 aa13.2□□□□□ -0.3
RAET1E-203ENST00000392270 NUP188Q5SRE5 1749 aa13.19□□□□□ -0.3
RAET1E-203ENST00000392270 MKRN3Q13064 507 aaKnown RBP13.19□□□□□ -0.3
RAET1E-203ENST00000392270 SIN3AQ96ST3 1273 aa13.19□□□□□ -0.3
RAET1E-203ENST00000392270 RREB1Q92766 1687 aa13.18□□□□□ -0.3
RAET1E-203ENST00000392270 NUDT16Q96DE0 195 aaKnown RBP13.18□□□□□ -0.3
RAET1E-203ENST00000392270 TIMELESSQ9UNS1 1208 aa13.18□□□□□ -0.3
RAET1E-203ENST00000392270 DISP2A7MBM2 1401 aa13.18□□□□□ -0.3
RAET1E-203ENST00000392270 NRKQ7Z2Y5 1582 aa13.18□□□□□ -0.3
RAET1E-203ENST00000392270 PDAP1Q13442 181 aaKnown RBP13.17□□□□□ -0.3
RAET1E-203ENST00000392270 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
RAET1E-203ENST00000392270 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
RAET1E-203ENST00000392270 CAMKK2Q96RR4 588 aa13.16□□□□□ -0.3
RAET1E-203ENST00000392270 LMO7Q8WWI1 1683 aa13.15□□□□□ -0.3
RAET1E-203ENST00000392270 CAMTA1Q9Y6Y1 1673 aa13.15□□□□□ -0.3
RAET1E-203ENST00000392270 SSH2Q76I76 1423 aa13.15□□□□□ -0.3
RAET1E-203ENST00000392270 APBA3O96018 575 aa13.15□□□□□ -0.3
RAET1E-203ENST00000392270 CDK19Q9BWU1 502 aa13.15□□□□□ -0.3
RAET1E-203ENST00000392270 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.15□□□□□ -0.3
RAET1E-203ENST00000392270 ACEP12821 1306 aa13.14□□□□□ -0.31
RAET1E-203ENST00000392270 LARP1Q6PKG0 1096 aaKnown RBP13.14□□□□□ -0.31
RAET1E-203ENST00000392270 FAM196AQ6ZSG2 479 aa13.14□□□□□ -0.31
RAET1E-203ENST00000392270 L3MBTL3Q96JM7 780 aaPredicted RBP13.14□□□□□ -0.31
RAET1E-203ENST00000392270 SNPHO15079 494 aa13.13□□□□□ -0.31
RAET1E-203ENST00000392270 EVA1CP58658 441 aa13.13□□□□□ -0.31
RAET1E-203ENST00000392270 L3MBTL2Q969R5 705 aa13.13□□□□□ -0.31
RAET1E-203ENST00000392270 POLR3AO14802 1390 aaPredicted RBP13.12□□□□□ -0.31
RAET1E-203ENST00000392270 NBPF8Q3BBV2 869 aa13.12□□□□□ -0.31
RAET1E-203ENST00000392270 SBF2Q86WG5 1849 aa13.11□□□□□ -0.31
RAET1E-203ENST00000392270 PARP4Q9UKK3 1724 aaKnown RBP13.11□□□□□ -0.31
RAET1E-203ENST00000392270 PDE3BQ13370 1112 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms