RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 CCT4P50991 539 aaKnown RBP20.22■□□□□ 0.83
SNX9-201ENST00000392185 SIL1Q9H173 461 aa20.22■□□□□ 0.83
SNX9-201ENST00000392185 ARHGEF5Q12774 1597 aa20.22■□□□□ 0.83
SNX9-201ENST00000392185 NEO1Q92859 1461 aa20.22■□□□□ 0.83
SNX9-201ENST00000392185 TAF7Q15545 349 aaPredicted RBP20.22■□□□□ 0.83
SNX9-201ENST00000392185 MYO5CQ9NQX4 1742 aa20.22■□□□□ 0.83
SNX9-201ENST00000392185 CADPS2Q86UW7 1296 aa20.22■□□□□ 0.83
SNX9-201ENST00000392185 TMX4Q9H1E5 349 aaPredicted RBP20.22■□□□□ 0.83
SNX9-201ENST00000392185 ABCC11Q96J66 1382 aa20.22■□□□□ 0.83
SNX9-201ENST00000392185 TRIM27P14373 513 aa20.21■□□□□ 0.83
SNX9-201ENST00000392185 INTS3Q68E01 1043 aaKnown RBP20.21■□□□□ 0.83
SNX9-201ENST00000392185 COL17A1Q9UMD9 1497 aaPredicted RBP20.21■□□□□ 0.83
SNX9-201ENST00000392185 CABLES1Q8TDN4 633 aa20.2■□□□□ 0.82
SNX9-201ENST00000392185 RUFY2Q8WXA3 655 aa20.2■□□□□ 0.82
SNX9-201ENST00000392185 TBX22Q9Y458 520 aa20.2■□□□□ 0.82
SNX9-201ENST00000392185 G3V3G9 751 aa20.2■□□□□ 0.82
SNX9-201ENST00000392185 LTKP29376 864 aa20.2■□□□□ 0.82
SNX9-201ENST00000392185 DCAF8Q5TAQ9 597 aa20.2■□□□□ 0.82
SNX9-201ENST00000392185 GCC2Q8IWJ2 1684 aa20.2■□□□□ 0.82
SNX9-201ENST00000392185 MBIPQ9NS73 344 aa20.2■□□□□ 0.82
SNX9-201ENST00000392185 EIF4A2Q14240 407 aaKnown RBP20.2■□□□□ 0.82
SNX9-201ENST00000392185 GCC1Q96CN9 775 aa20.2■□□□□ 0.82
SNX9-201ENST00000392185 IL1RAPL2Q9NP60 686 aa20.2■□□□□ 0.82
SNX9-201ENST00000392185 BACH2Q9BYV9 841 aa20.19■□□□□ 0.82
SNX9-201ENST00000392185 EXOC6BQ9Y2D4 811 aa20.19■□□□□ 0.82
SNX9-201ENST00000392185 PHACTR3Q96KR7 559 aa20.19■□□□□ 0.82
SNX9-201ENST00000392185 CDC45O75419 566 aa20.18■□□□□ 0.82
SNX9-201ENST00000392185 SRGAP3O43295 1099 aa20.18■□□□□ 0.82
SNX9-201ENST00000392185 KAT6BQ8WYB5 2073 aa20.18■□□□□ 0.82
SNX9-201ENST00000392185 EIF2AK4Q9P2K8 1649 aaKnown RBP20.18■□□□□ 0.82
SNX9-201ENST00000392185 ANXA1P04083 346 aa20.18■□□□□ 0.82
SNX9-201ENST00000392185 APPP05067 770 aa20.17■□□□□ 0.82
SNX9-201ENST00000392185 PLEKHH1Q9ULM0 1364 aa20.17■□□□□ 0.82
SNX9-201ENST00000392185 ERC2O15083 957 aa20.17■□□□□ 0.82
SNX9-201ENST00000392185 ANKRD24Q8TF21 1146 aa20.17■□□□□ 0.82
SNX9-201ENST00000392185 PUS7Q96PZ0 661 aaKnown RBP20.16■□□□□ 0.82
SNX9-201ENST00000392185 SPINK5Q9NQ38 1064 aaPredicted RBP20.16■□□□□ 0.82
SNX9-201ENST00000392185 ZKSCAN1P17029 563 aaPredicted RBP20.16■□□□□ 0.82
SNX9-201ENST00000392185 CHD1LQ86WJ1 897 aa20.16■□□□□ 0.82
SNX9-201ENST00000392185 UGGT1Q9NYU2 1555 aa20.16■□□□□ 0.82
SNX9-201ENST00000392185 CCDC85AQ96PX6 553 aaPredicted RBP20.16■□□□□ 0.82
SNX9-201ENST00000392185 LRRC59Q96AG4 307 aaKnown RBP20.15■□□□□ 0.82
SNX9-201ENST00000392185 ZCCHC11Q5TAX3 1644 aaKnown RBP20.15■□□□□ 0.82
SNX9-201ENST00000392185 POLR3AO14802 1390 aaPredicted RBP20.15■□□□□ 0.82
SNX9-201ENST00000392185 LRPPRCP42704 1394 aaKnown RBP20.14■□□□□ 0.82
SNX9-201ENST00000392185 SPATA31E1Q6ZUB1 1445 aa20.14■□□□□ 0.81
SNX9-201ENST00000392185 TNNQ9UQP3 1299 aa20.14■□□□□ 0.81
SNX9-201ENST00000392185 ALDH1L2Q3SY69 923 aa20.14■□□□□ 0.81
SNX9-201ENST00000392185 AMOTQ4VCS5 1084 aa20.14■□□□□ 0.81
SNX9-201ENST00000392185 TTC21AQ8NDW8 1320 aa20.14■□□□□ 0.81
SNX9-201ENST00000392185 VPS37DQ86XT2 251 aa20.13■□□□□ 0.81
SNX9-201ENST00000392185 ABCC1P33527 1531 aa20.13■□□□□ 0.81
SNX9-201ENST00000392185 MAP4K4O95819 1239 aaPredicted RBP20.13■□□□□ 0.81
SNX9-201ENST00000392185 ORAI2Q96SN7 254 aa20.13■□□□□ 0.81
SNX9-201ENST00000392185 KRT24Q2M2I5 525 aa20.12■□□□□ 0.81
SNX9-201ENST00000392185 DNTTIP2Q5QJE6 756 aaKnown RBP20.12■□□□□ 0.81
SNX9-201ENST00000392185 FSD1Q9BTV5 496 aa20.12■□□□□ 0.81
SNX9-201ENST00000392185 ADGBQ8N7X0 1667 aa20.12■□□□□ 0.81
SNX9-201ENST00000392185 KIF6Q6ZMV9 814 aa20.12■□□□□ 0.81
SNX9-201ENST00000392185 LRRCC1Q9C099 1032 aa20.12■□□□□ 0.81
SNX9-201ENST00000392185 MAP3K19Q56UN5 1328 aa20.12■□□□□ 0.81
SNX9-201ENST00000392185 DNAJC2Q99543 621 aaKnown RBP20.11■□□□□ 0.81
SNX9-201ENST00000392185 SMARCA5O60264 1052 aaPredicted RBP20.11■□□□□ 0.81
SNX9-201ENST00000392185 C19orf44Q9H6X5 657 aa20.11■□□□□ 0.81
SNX9-201ENST00000392185 WASHC4Q2M389 1173 aa20.1■□□□□ 0.81
SNX9-201ENST00000392185 C8orf58Q8NAV2 365 aa20.1■□□□□ 0.81
SNX9-201ENST00000392185 RPAP2Q8IXW5 612 aaPredicted RBP20.1■□□□□ 0.81
SNX9-201ENST00000392185 PLA2R1Q13018 1463 aa20.09■□□□□ 0.81
SNX9-201ENST00000392185 FLIIQ13045 1269 aa20.09■□□□□ 0.81
SNX9-201ENST00000392185 EYA1Q99502 592 aa20.09■□□□□ 0.81
SNX9-201ENST00000392185 TSPYL6Q8N831 410 aa20.08■□□□□ 0.81
SNX9-201ENST00000392185 DMRT2Q9Y5R5 561 aa20.08■□□□□ 0.81
SNX9-201ENST00000392185 PREX2Q70Z35 1606 aa20.08■□□□□ 0.8
SNX9-201ENST00000392185 MTHFSDQ2M296 383 aaKnown RBP20.08■□□□□ 0.8
SNX9-201ENST00000392185 TMEM2Q9UHN6 1383 aa20.08■□□□□ 0.8
SNX9-201ENST00000392185 IGHDP01880 384 aa20.08■□□□□ 0.8
SNX9-201ENST00000392185 GCP02774 474 aa20.08■□□□□ 0.8
SNX9-201ENST00000392185 ZFYVE16Q7Z3T8 1539 aa20.08■□□□□ 0.8
SNX9-201ENST00000392185 CNTROBQ8N137 903 aa20.07■□□□□ 0.8
SNX9-201ENST00000392185 LRRFIP1Q32MZ4 808 aaKnown RBP20.07■□□□□ 0.8
SNX9-201ENST00000392185 MSH6P52701 1360 aa20.07■□□□□ 0.8
SNX9-201ENST00000392185 L1TD1Q5T7N2 865 aaKnown RBP20.07■□□□□ 0.8
SNX9-201ENST00000392185 DDX49Q9Y6V7 483 aaKnown RBP20.07■□□□□ 0.8
SNX9-201ENST00000392185 PIK3C2GO75747 1445 aa20.06■□□□□ 0.8
SNX9-201ENST00000392185 TSPOAP1O95153 1857 aa20.06■□□□□ 0.8
SNX9-201ENST00000392185 PTPRTO14522 1441 aa20.06■□□□□ 0.8
SNX9-201ENST00000392185 FAM184AQ8NB25 1140 aa20.06■□□□□ 0.8
SNX9-201ENST00000392185 NPHP3Q7Z494 1330 aa20.06■□□□□ 0.8
SNX9-201ENST00000392185 NEK4P51957 841 aa20.05■□□□□ 0.8
SNX9-201ENST00000392185 SLC39A6Q13433 755 aa20.05■□□□□ 0.8
SNX9-201ENST00000392185 MLH3Q9UHC1 1453 aa20.05■□□□□ 0.8
SNX9-201ENST00000392185 NUTM1Q86Y26 1132 aa20.05■□□□□ 0.8
SNX9-201ENST00000392185 TMOD3Q9NYL9 352 aa20.05■□□□□ 0.8
SNX9-201ENST00000392185 RNF20Q5VTR2 975 aa20.05■□□□□ 0.8
SNX9-201ENST00000392185 CHMP5Q9NZZ3 219 aa20.05■□□□□ 0.8
SNX9-201ENST00000392185 PCDHB15Q9Y5E8 787 aa20.05■□□□□ 0.8
SNX9-201ENST00000392185 LRRFIP2Q9Y608 721 aaKnown RBP20.04■□□□□ 0.8
SNX9-201ENST00000392185 H3BQV1 296 aa20.04■□□□□ 0.8
SNX9-201ENST00000392185 IFFO2Q5TF58 517 aa20.04■□□□□ 0.8
SNX9-201ENST00000392185 CNNM1Q9NRU3 951 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms