RNA–Protein interactions for RNA: ENST00000392114.6

VIL1-202, Transcript of villin 1, humanhuman

TSL 2 BASIC

Gene VIL1, Length 1,968 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-202ENST00000392114 SLIT3O75094 1523 aa15.83■□□□□ 0.12
VIL1-202ENST00000392114 GCP02774 474 aa15.83■□□□□ 0.12
VIL1-202ENST00000392114 HOXC9P31274 260 aa15.83■□□□□ 0.12
VIL1-202ENST00000392114 PRKAR2BP31323 418 aa15.83■□□□□ 0.12
VIL1-202ENST00000392114 TMPOP42166 694 aaKnown RBP15.83■□□□□ 0.12
VIL1-202ENST00000392114 NEUROD2Q15784 382 aa15.83■□□□□ 0.12
VIL1-202ENST00000392114 USP19O94966 1318 aa15.83■□□□□ 0.12
VIL1-202ENST00000392114 PHRF1Q9P1Y6 1649 aaKnown RBP15.82■□□□□ 0.12
VIL1-202ENST00000392114 IP6K1Q92551 441 aa15.82■□□□□ 0.12
VIL1-202ENST00000392114 SLFN5Q08AF3 891 aa15.82■□□□□ 0.12
VIL1-202ENST00000392114 PHF23Q9BUL5 403 aaPredicted RBP15.82■□□□□ 0.12
VIL1-202ENST00000392114 TNS3Q68CZ2 1445 aa15.82■□□□□ 0.12
VIL1-202ENST00000392114 HMOX1P09601 288 aa15.81■□□□□ 0.12
VIL1-202ENST00000392114 CDCA7LQ96GN5 454 aa15.81■□□□□ 0.12
VIL1-202ENST00000392114 NFAT5O94916 1531 aa15.81■□□□□ 0.12
VIL1-202ENST00000392114 LMOD3Q0VAK6 560 aa15.8■□□□□ 0.12
VIL1-202ENST00000392114 SPATA31A3Q5VYP0 1347 aa15.8■□□□□ 0.12
VIL1-202ENST00000392114 PXDNQ92626 1479 aa15.8■□□□□ 0.12
VIL1-202ENST00000392114 RIPK4P57078 832 aa15.8■□□□□ 0.12
VIL1-202ENST00000392114 CALD1Q05682 793 aaKnown RBP15.8■□□□□ 0.12
VIL1-202ENST00000392114 SULT6B1Q6IMI4 303 aa15.8■□□□□ 0.12
VIL1-202ENST00000392114 TRMT2AQ8IZ69 625 aaKnown RBP15.79■□□□□ 0.12
VIL1-202ENST00000392114 RRP7AQ9Y3A4 280 aaKnown RBP15.79■□□□□ 0.12
VIL1-202ENST00000392114 RGPD1P0DJD0 1748 aa15.79■□□□□ 0.12
VIL1-202ENST00000392114 SOS2Q07890 1332 aaPredicted RBP15.78■□□□□ 0.12
VIL1-202ENST00000392114 NFE2L2Q16236 605 aa15.78■□□□□ 0.12
VIL1-202ENST00000392114 ERICH6BQ5W0A0 696 aa15.78■□□□□ 0.12
VIL1-202ENST00000392114 ARHGEF25Q86VW2 580 aa15.78■□□□□ 0.12
VIL1-202ENST00000392114 MYH16Q9H6N6 1097 aa15.78■□□□□ 0.12
VIL1-202ENST00000392114 RCAN3Q9UKA8 241 aa15.78■□□□□ 0.12
VIL1-202ENST00000392114 DUSP27Q5VZP5 1158 aa15.78■□□□□ 0.12
VIL1-202ENST00000392114 LTBP4Q8N2S1 1624 aa15.77■□□□□ 0.12
VIL1-202ENST00000392114 IL16Q14005 1332 aa15.77■□□□□ 0.12
VIL1-202ENST00000392114 IGSF1Q8N6C5 1336 aa15.77■□□□□ 0.11
VIL1-202ENST00000392114 FKBP8Q14318 412 aa15.76■□□□□ 0.11
VIL1-202ENST00000392114 AEBP2Q6ZN18 517 aaPredicted RBP15.76■□□□□ 0.11
VIL1-202ENST00000392114 DDX17Q92841 729 aaKnown RBP15.76■□□□□ 0.11
VIL1-202ENST00000392114 KDRP35968 1356 aa15.76■□□□□ 0.11
VIL1-202ENST00000392114 NHSL1Q5SYE7 1610 aa15.75■□□□□ 0.11
VIL1-202ENST00000392114 EYA1Q99502 592 aa15.75■□□□□ 0.11
VIL1-202ENST00000392114 MED1Q15648 1581 aaPredicted RBP15.74■□□□□ 0.11
VIL1-202ENST00000392114 ZBTB7CA1YPR0 619 aa15.74■□□□□ 0.11
VIL1-202ENST00000392114 PHACTR3Q96KR7 559 aa15.74■□□□□ 0.11
VIL1-202ENST00000392114 RNF123Q5XPI4 1314 aa15.74■□□□□ 0.11
VIL1-202ENST00000392114 ABCC6O95255 1503 aa15.73■□□□□ 0.11
VIL1-202ENST00000392114 TRIM35Q9UPQ4 493 aa15.73■□□□□ 0.11
VIL1-202ENST00000392114 GAS2L2Q8NHY3 880 aa15.72■□□□□ 0.11
VIL1-202ENST00000392114 LTV1Q96GA3 475 aaPredicted RBP15.72■□□□□ 0.11
VIL1-202ENST00000392114 DLG5Q8TDM6 1919 aa15.72■□□□□ 0.11
VIL1-202ENST00000392114 TOM1O60784 492 aa15.71■□□□□ 0.11
VIL1-202ENST00000392114 CT47B1P0C2W7 299 aaPredicted RBP15.71■□□□□ 0.11
VIL1-202ENST00000392114 AEBP1Q8IUX7 1158 aa15.71■□□□□ 0.11
VIL1-202ENST00000392114 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.71■□□□□ 0.11
VIL1-202ENST00000392114 HAP1P54257 671 aaPredicted RBP15.71■□□□□ 0.1
VIL1-202ENST00000392114 LRRC59Q96AG4 307 aaKnown RBP15.71■□□□□ 0.1
VIL1-202ENST00000392114 CPDO75976 1380 aa15.7■□□□□ 0.1
VIL1-202ENST00000392114 ZC3H6P61129 1189 aaKnown RBP15.7■□□□□ 0.1
VIL1-202ENST00000392114 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
VIL1-202ENST00000392114 SPINK5Q9NQ38 1064 aaPredicted RBP15.69■□□□□ 0.1
VIL1-202ENST00000392114 CRYBG1Q9Y4K1 1723 aa15.69■□□□□ 0.1
VIL1-202ENST00000392114 HTATSF1O43719 755 aaKnown RBP15.69■□□□□ 0.1
VIL1-202ENST00000392114 GNAI1P63096 354 aa15.69■□□□□ 0.1
VIL1-202ENST00000392114 ANKRD24Q8TF21 1146 aa15.69■□□□□ 0.1
VIL1-202ENST00000392114 RTF1Q92541 710 aaKnown RBP15.68■□□□□ 0.1
VIL1-202ENST00000392114 ROBO1Q9Y6N7 1651 aa15.68■□□□□ 0.1
VIL1-202ENST00000392114 RRP1P56182 461 aaKnown RBP15.67■□□□□ 0.1
VIL1-202ENST00000392114 FAM208AQ9UK61 1670 aaKnown RBP15.67■□□□□ 0.1
VIL1-202ENST00000392114 IFT57Q9NWB7 429 aa15.67■□□□□ 0.1
VIL1-202ENST00000392114 AHDC1Q5TGY3 1603 aaPredicted RBP15.67■□□□□ 0.1
VIL1-202ENST00000392114 RGPD5Q99666 1765 aa15.66■□□□□ 0.1
VIL1-202ENST00000392114 NBPF6Q5VWK0 638 aa15.66■□□□□ 0.1
VIL1-202ENST00000392114 CABLES1Q8TDN4 633 aa15.66■□□□□ 0.1
VIL1-202ENST00000392114 NBPF4Q96M43 638 aa15.66■□□□□ 0.1
VIL1-202ENST00000392114 AMOTQ4VCS5 1084 aa15.66■□□□□ 0.1
VIL1-202ENST00000392114 ERBB3P21860 1342 aa15.65■□□□□ 0.1
VIL1-202ENST00000392114 COL18A1P39060 1754 aa15.65■□□□□ 0.1
VIL1-202ENST00000392114 MTHFSDQ2M296 383 aaKnown RBP15.64■□□□□ 0.09
VIL1-202ENST00000392114 PLEKHO1Q53GL0 409 aaPredicted RBP15.64■□□□□ 0.09
VIL1-202ENST00000392114 ZNF428Q96B54 188 aa15.64■□□□□ 0.09
VIL1-202ENST00000392114 CFAP44Q96MT7 982 aa15.64■□□□□ 0.09
VIL1-202ENST00000392114 AXIN2Q9Y2T1 843 aa15.64■□□□□ 0.09
VIL1-202ENST00000392114 FANCIQ9NVI1 1328 aa15.64■□□□□ 0.09
VIL1-202ENST00000392114 KIAA0232Q92628 1395 aa15.64■□□□□ 0.09
VIL1-202ENST00000392114 PLEKHG2Q9H7P9 1386 aa15.64■□□□□ 0.09
VIL1-202ENST00000392114 GNAT3A8MTJ3 354 aa15.64■□□□□ 0.09
VIL1-202ENST00000392114 PRDM11Q9NQV5 511 aa15.64■□□□□ 0.09
VIL1-202ENST00000392114 RGPD2P0DJD1 1756 aa15.63■□□□□ 0.09
VIL1-202ENST00000392114 NCAPD2Q15021 1401 aa15.63■□□□□ 0.09
VIL1-202ENST00000392114 CSB-PGBD3P0DP91 1061 aa15.63■□□□□ 0.09
VIL1-202ENST00000392114 CAMTA1Q9Y6Y1 1673 aa15.63■□□□□ 0.09
VIL1-202ENST00000392114 LAS1LQ9Y4W2 734 aaKnown RBP15.62■□□□□ 0.09
VIL1-202ENST00000392114 ABCA3Q99758 1704 aa15.61■□□□□ 0.09
VIL1-202ENST00000392114 ZNF853P0CG23 659 aa15.61■□□□□ 0.09
VIL1-202ENST00000392114 PPP4R2Q9NY27 417 aa15.61■□□□□ 0.09
VIL1-202ENST00000392114 IRX6P78412 446 aaPredicted RBP15.6■□□□□ 0.09
VIL1-202ENST00000392114 USHBP1Q8N6Y0 703 aa15.6■□□□□ 0.09
VIL1-202ENST00000392114 RAPGEF4Q8WZA2 1011 aa15.6■□□□□ 0.09
VIL1-202ENST00000392114 NLRP2Q9NX02 1062 aa15.6■□□□□ 0.09
VIL1-202ENST00000392114 EXOSC9Q06265 439 aaKnown RBP15.6■□□□□ 0.09
VIL1-202ENST00000392114 TSR2Q969E8 191 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms