RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 COG3Q96JB2 828 aa13.74□□□□□ -0.21
NLRP3-205ENST00000391827 EMILIN1Q9Y6C2 1016 aa13.74□□□□□ -0.21
NLRP3-205ENST00000391827 ROBO2Q9HCK4 1378 aa13.74□□□□□ -0.21
NLRP3-205ENST00000391827 DAXXQ9UER7 740 aaPredicted RBP13.74□□□□□ -0.21
NLRP3-205ENST00000391827 PIK3R4Q99570 1358 aa13.73□□□□□ -0.21
NLRP3-205ENST00000391827 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
NLRP3-205ENST00000391827 ZNF853P0CG23 659 aa13.73□□□□□ -0.21
NLRP3-205ENST00000391827 IFT57Q9NWB7 429 aa13.73□□□□□ -0.21
NLRP3-205ENST00000391827 PRR36Q9H6K5 1346 aa13.73□□□□□ -0.21
NLRP3-205ENST00000391827 PHACTR3Q96KR7 559 aa13.73□□□□□ -0.21
NLRP3-205ENST00000391827 ZBTB40Q9NUA8 1239 aa13.73□□□□□ -0.21
NLRP3-205ENST00000391827 PTCH1Q13635 1447 aa13.72□□□□□ -0.21
NLRP3-205ENST00000391827 LMOD3Q0VAK6 560 aa13.72□□□□□ -0.21
NLRP3-205ENST00000391827 ARHGAP45Q92619 1136 aa13.72□□□□□ -0.21
NLRP3-205ENST00000391827 NALCNQ8IZF0 1738 aa13.72□□□□□ -0.21
NLRP3-205ENST00000391827 GNAI1P63096 354 aa13.72□□□□□ -0.21
NLRP3-205ENST00000391827 SMC5Q8IY18 1101 aa13.72□□□□□ -0.21
NLRP3-205ENST00000391827 FBLN1P23142 703 aa13.71□□□□□ -0.21
NLRP3-205ENST00000391827 OVOS2A0A0J9YW53 1432 aa13.71□□□□□ -0.21
NLRP3-205ENST00000391827 OVOS2Q6IE36 1432 aa13.71□□□□□ -0.21
NLRP3-205ENST00000391827 ITPRIPQ8IWB1 547 aa13.71□□□□□ -0.21
NLRP3-205ENST00000391827 TMEM57Q8N5G2 664 aa13.71□□□□□ -0.21
NLRP3-205ENST00000391827 SLIT1O75093 1534 aa13.71□□□□□ -0.22
NLRP3-205ENST00000391827 PLEKHG3A1L390 1219 aa13.7□□□□□ -0.22
NLRP3-205ENST00000391827 SEC24BO95487 1268 aa13.7□□□□□ -0.22
NLRP3-205ENST00000391827 ARHGAP23Q9P227 1491 aa13.7□□□□□ -0.22
NLRP3-205ENST00000391827 DLG5Q8TDM6 1919 aa13.7□□□□□ -0.22
NLRP3-205ENST00000391827 VAMP4O75379 141 aa13.7□□□□□ -0.22
NLRP3-205ENST00000391827 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
NLRP3-205ENST00000391827 HMOX1P09601 288 aa13.69□□□□□ -0.22
NLRP3-205ENST00000391827 CHMP4BQ9H444 224 aaKnown RBP13.69□□□□□ -0.22
NLRP3-205ENST00000391827 RGPD1P0DJD0 1748 aa13.68□□□□□ -0.22
NLRP3-205ENST00000391827 TBC1D32Q96NH3 1257 aa13.68□□□□□ -0.22
NLRP3-205ENST00000391827 NCKAP5LQ9HCH0 1330 aa13.68□□□□□ -0.22
NLRP3-205ENST00000391827 USP6P35125 1406 aa13.68□□□□□ -0.22
NLRP3-205ENST00000391827 SSH2Q76I76 1423 aa13.68□□□□□ -0.22
NLRP3-205ENST00000391827 SLC4A3P48751 1232 aa13.68□□□□□ -0.22
NLRP3-205ENST00000391827 MRPL50Q8N5N7 158 aaKnown RBP13.68□□□□□ -0.22
NLRP3-205ENST00000391827 CFAP44Q96MT7 982 aa13.68□□□□□ -0.22
NLRP3-205ENST00000391827 USP31Q70CQ4 1352 aa13.68□□□□□ -0.22
NLRP3-205ENST00000391827 UPF2Q9HAU5 1272 aaKnown RBP13.67□□□□□ -0.22
NLRP3-205ENST00000391827 TTC21BQ7Z4L5 1316 aa13.67□□□□□ -0.22
NLRP3-205ENST00000391827 DIP2AQ14689 1571 aa13.67□□□□□ -0.22
NLRP3-205ENST00000391827 PTPRUQ92729 1446 aa13.67□□□□□ -0.22
NLRP3-205ENST00000391827 NFKBIBQ15653 356 aa13.67□□□□□ -0.22
NLRP3-205ENST00000391827 MBIPQ9NS73 344 aa13.67□□□□□ -0.22
NLRP3-205ENST00000391827 BECN1Q14457 450 aa13.66□□□□□ -0.22
NLRP3-205ENST00000391827 ABCC4O15439 1325 aa13.66□□□□□ -0.22
NLRP3-205ENST00000391827 RIMS1Q86UR5 1692 aaKnown RBP13.66□□□□□ -0.22
NLRP3-205ENST00000391827 LTKP29376 864 aa13.66□□□□□ -0.22
NLRP3-205ENST00000391827 RRS1Q15050 365 aaKnown RBP13.66□□□□□ -0.22
NLRP3-205ENST00000391827 KIF24Q5T7B8 1368 aa13.65□□□□□ -0.22
NLRP3-205ENST00000391827 ACEP12821 1306 aa13.65□□□□□ -0.22
NLRP3-205ENST00000391827 PEAK1Q9H792 1746 aa13.65□□□□□ -0.22
NLRP3-205ENST00000391827 NUCB1Q02818 461 aa13.64□□□□□ -0.23
NLRP3-205ENST00000391827 ZBTB7BO15156 539 aaPredicted RBP13.64□□□□□ -0.23
NLRP3-205ENST00000391827 THUMPD2Q9BTF0 503 aaKnown RBP13.64□□□□□ -0.23
NLRP3-205ENST00000391827 TTC21AQ8NDW8 1320 aa13.63□□□□□ -0.23
NLRP3-205ENST00000391827 EIF4A2Q14240 407 aaKnown RBP13.63□□□□□ -0.23
NLRP3-205ENST00000391827 TSPYL6Q8N831 410 aa13.63□□□□□ -0.23
NLRP3-205ENST00000391827 TBX22Q9Y458 520 aa13.63□□□□□ -0.23
NLRP3-205ENST00000391827 TWISTNBQ3B726 338 aaPredicted RBP13.63□□□□□ -0.23
NLRP3-205ENST00000391827 EID1Q9Y6B2 187 aa13.62□□□□□ -0.23
NLRP3-205ENST00000391827 XRN1Q8IZH2 1706 aaKnown RBP13.62□□□□□ -0.23
NLRP3-205ENST00000391827 GCC1Q96CN9 775 aa13.61□□□□□ -0.23
NLRP3-205ENST00000391827 API5Q9BZZ5 524 aaKnown RBP13.61□□□□□ -0.23
NLRP3-205ENST00000391827 ARHGEF10O15013 1369 aa13.61□□□□□ -0.23
NLRP3-205ENST00000391827 KIAA0232Q92628 1395 aa13.61□□□□□ -0.23
NLRP3-205ENST00000391827 HAP1P54257 671 aaPredicted RBP13.61□□□□□ -0.23
NLRP3-205ENST00000391827 GLIPR1L2Q4G1C9 344 aa13.61□□□□□ -0.23
NLRP3-205ENST00000391827 FMN2Q9NZ56 1722 aa13.61□□□□□ -0.23
NLRP3-205ENST00000391827 C8orf58Q8NAV2 365 aa13.6□□□□□ -0.23
NLRP3-205ENST00000391827 USP54Q70EL1 1684 aa13.6□□□□□ -0.23
NLRP3-205ENST00000391827 CHD1LQ86WJ1 897 aa13.6□□□□□ -0.23
NLRP3-205ENST00000391827 FER1L4A9Z1Z3 1794 aa13.59□□□□□ -0.23
NLRP3-205ENST00000391827 ANKARQ7Z5J8 1434 aa13.59□□□□□ -0.23
NLRP3-205ENST00000391827 CHL1O00533 1208 aa13.59□□□□□ -0.23
NLRP3-205ENST00000391827 FAM83GA6ND36 823 aa13.58□□□□□ -0.24
NLRP3-205ENST00000391827 SULT6B1Q6IMI4 303 aa13.58□□□□□ -0.24
NLRP3-205ENST00000391827 ANTXR1Q9H6X2 564 aa13.58□□□□□ -0.24
NLRP3-205ENST00000391827 AEBP1Q8IUX7 1158 aa13.58□□□□□ -0.24
NLRP3-205ENST00000391827 AMOTL2Q9Y2J4 779 aa13.58□□□□□ -0.24
NLRP3-205ENST00000391827 SBNO1A3KN83 1393 aa13.58□□□□□ -0.24
NLRP3-205ENST00000391827 KDRP35968 1356 aa13.58□□□□□ -0.24
NLRP3-205ENST00000391827 BMP2KLQ5H9B9 411 aa13.57□□□□□ -0.24
NLRP3-205ENST00000391827 C22orf23Q9BZE7 217 aa13.57□□□□□ -0.24
NLRP3-205ENST00000391827 CRB1P82279 1406 aa13.57□□□□□ -0.24
NLRP3-205ENST00000391827 GSE1Q14687 1217 aa13.57□□□□□ -0.24
NLRP3-205ENST00000391827 TBC1D2Q9BYX2 928 aa13.57□□□□□ -0.24
NLRP3-205ENST00000391827 FLT4P35916 1363 aa13.56□□□□□ -0.24
NLRP3-205ENST00000391827 RGS12O14924 1447 aa13.56□□□□□ -0.24
NLRP3-205ENST00000391827 PIK3C2AO00443 1686 aa13.56□□□□□ -0.24
NLRP3-205ENST00000391827 INTS3Q68E01 1043 aaKnown RBP13.56□□□□□ -0.24
NLRP3-205ENST00000391827 SLC26A8Q96RN1 970 aa13.56□□□□□ -0.24
NLRP3-205ENST00000391827 CEBPAP49715 358 aaPredicted RBP13.55□□□□□ -0.24
NLRP3-205ENST00000391827 DCTN1Q14203 1278 aa13.55□□□□□ -0.24
NLRP3-205ENST00000391827 HSP90AB2PQ58FF8 381 aa13.55□□□□□ -0.24
NLRP3-205ENST00000391827 SIRT2Q8IXJ6 389 aa13.55□□□□□ -0.24
NLRP3-205ENST00000391827 THEMISQ8N1K5 641 aaPredicted RBP13.55□□□□□ -0.24
NLRP3-205ENST00000391827 RBM25P49756 843 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms