RNA–Protein interactions for RNA: ENST00000391324.1

SNORA48.8-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 134 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.8-201ENST00000391324 RGPD3A6NKT7 1758 aaPredicted RBP4.47□□□□□ -1.69
SNORA48.8-201ENST00000391324 RGPD4Q7Z3J3 1758 aa4.47□□□□□ -1.69
SNORA48.8-201ENST00000391324 SPATA31A1Q5TZJ5 1347 aa4.46□□□□□ -1.69
SNORA48.8-201ENST00000391324 CLGNO14967 610 aa4.46□□□□□ -1.7
SNORA48.8-201ENST00000391324 PPM1GO15355 546 aaPredicted RBP4.46□□□□□ -1.7
SNORA48.8-201ENST00000391324 RAD21O60216 631 aa4.46□□□□□ -1.7
SNORA48.8-201ENST00000391324 IRX6P78412 446 aaPredicted RBP4.46□□□□□ -1.7
SNORA48.8-201ENST00000391324 SLC15A2Q16348 729 aa4.46□□□□□ -1.7
SNORA48.8-201ENST00000391324 CNPY4Q8N129 248 aa4.46□□□□□ -1.7
SNORA48.8-201ENST00000391324 KCTD17Q8N5Z5 321 aa4.46□□□□□ -1.7
SNORA48.8-201ENST00000391324 BBXQ8WY36 941 aaPredicted RBP4.46□□□□□ -1.7
SNORA48.8-201ENST00000391324 USP35Q9P2H5 1018 aa4.46□□□□□ -1.7
SNORA48.8-201ENST00000391324 TNRC18O15417 2968 aaPredicted RBP4.46□□□□□ -1.7
SNORA48.8-201ENST00000391324 ARHGEF28Q8N1W1 1705 aaKnown RBP4.46□□□□□ -1.7
SNORA48.8-201ENST00000391324 PHRF1Q9P1Y6 1649 aaKnown RBP4.46□□□□□ -1.7
SNORA48.8-201ENST00000391324 RGPD8O14715 1765 aaPredicted RBP4.45□□□□□ -1.7
SNORA48.8-201ENST00000391324 COL14A1Q05707 1796 aaKnown RBP4.45□□□□□ -1.7
SNORA48.8-201ENST00000391324 VGFO15240 615 aaPredicted RBP4.45□□□□□ -1.7
SNORA48.8-201ENST00000391324 FOXN1O15353 648 aa4.45□□□□□ -1.7
SNORA48.8-201ENST00000391324 TOMM70O94826 608 aa4.45□□□□□ -1.7
SNORA48.8-201ENST00000391324 ANAPC15P60006 121 aa4.45□□□□□ -1.7
SNORA48.8-201ENST00000391324 MLLT1Q03111 559 aaPredicted RBP4.45□□□□□ -1.7
SNORA48.8-201ENST00000391324 ZNF827Q17R98 1081 aa4.45□□□□□ -1.7
SNORA48.8-201ENST00000391324 KRT28Q7Z3Y7 464 aa4.45□□□□□ -1.7
SNORA48.8-201ENST00000391324 ABHD8Q96I13 439 aa4.45□□□□□ -1.7
SNORA48.8-201ENST00000391324 SLC52A1Q9NWF4 448 aa4.45□□□□□ -1.7
SNORA48.8-201ENST00000391324 COL24A1Q17RW2 1714 aa4.45□□□□□ -1.7
SNORA48.8-201ENST00000391324 TNS3Q68CZ2 1445 aa4.45□□□□□ -1.7
SNORA48.8-201ENST00000391324 FYCO1Q9BQS8 1478 aa4.44□□□□□ -1.7
SNORA48.8-201ENST00000391324 CRYBG1Q9Y4K1 1723 aa4.44□□□□□ -1.7
SNORA48.8-201ENST00000391324 AATKQ6ZMQ8 1374 aa4.44□□□□□ -1.7
SNORA48.8-201ENST00000391324 PAPPAQ13219 1627 aa4.44□□□□□ -1.7
SNORA48.8-201ENST00000391324 TSPY4P0CV99 314 aa4.44□□□□□ -1.7
SNORA48.8-201ENST00000391324 TSPY10P0CW01 314 aa4.44□□□□□ -1.7
SNORA48.8-201ENST00000391324 TXNRD1Q16881 649 aa4.44□□□□□ -1.7
SNORA48.8-201ENST00000391324 LMOD2Q6P5Q4 547 aa4.44□□□□□ -1.7
SNORA48.8-201ENST00000391324 GPATCH11Q8N954 259 aa4.44□□□□□ -1.7
SNORA48.8-201ENST00000391324 CWC22Q9HCG8 908 aaKnown RBP4.44□□□□□ -1.7
SNORA48.8-201ENST00000391324 RRP7BPQ9NSQ0 103 aa4.44□□□□□ -1.7
SNORA48.8-201ENST00000391324 TOPAZ1Q8N9V7 1692 aa4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 PLSCR1O15162 318 aa4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 PHF14O94880 888 aa4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 CANXP27824 592 aaKnown RBP4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 RGS19P49795 217 aa4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 NEUROD1Q13562 356 aa4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 CHRNA2Q15822 529 aa4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 AXDND1Q5T1B0 1012 aaPredicted RBP4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 FAM177A1Q8N128 213 aaPredicted RBP4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 ZNF622Q969S3 477 aaKnown RBP eCLIP4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 STRN4Q9NRL3 753 aa4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 STK32BQ9NY57 414 aa4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 TUBGCP6Q96RT7 1819 aa4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 CDC42BPGQ6DT37 1551 aa4.43□□□□□ -1.7
SNORA48.8-201ENST00000391324 DHX57Q6P158 1386 aaKnown RBP4.42□□□□□ -1.7
SNORA48.8-201ENST00000391324 KIF15Q9NS87 1388 aa4.42□□□□□ -1.7
SNORA48.8-201ENST00000391324 E9PSI1 815 aa4.42□□□□□ -1.7
SNORA48.8-201ENST00000391324 GRIN3BO60391 1043 aa4.42□□□□□ -1.7
SNORA48.8-201ENST00000391324 RBM25P49756 843 aaKnown RBP4.42□□□□□ -1.7
SNORA48.8-201ENST00000391324 PDE3BQ13370 1112 aa4.42□□□□□ -1.7
SNORA48.8-201ENST00000391324 HSP90AB4PQ58FF6 505 aa4.42□□□□□ -1.7
SNORA48.8-201ENST00000391324 WWC1Q8IX03 1113 aa4.42□□□□□ -1.7
SNORA48.8-201ENST00000391324 NECTIN2Q92692 538 aa4.42□□□□□ -1.7
SNORA48.8-201ENST00000391324 RNF216Q9NWF9 866 aaPredicted RBP4.42□□□□□ -1.7
SNORA48.8-201ENST00000391324 RRBP1Q9P2E9 1410 aaKnown RBP4.42□□□□□ -1.7
SNORA48.8-201ENST00000391324 USP19O94966 1318 aa4.42□□□□□ -1.7
SNORA48.8-201ENST00000391324 PDE4DIPQ5VU43 2346 aa4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 NAIPQ13075 1403 aa4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 CEP162Q5TB80 1403 aa4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 ERBINQ96RT1 1412 aa4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 CCDC85CA6NKD9 419 aa4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 HDGFP51858 240 aaKnown RBP4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 FAM193AP78312 1265 aa4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 CCDC27Q2M243 656 aa4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 SECISBP2LQ93073 1101 aaKnown RBP4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 TRIM44Q96DX7 344 aaPredicted RBP4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 ZNF692Q9BU19 519 aaPredicted RBP4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 PRDM16Q9HAZ2 1276 aa4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 PRDM10Q9NQV6 1147 aa4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 LRRC37A3O60309 1634 aa4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 TULP4Q9NRJ4 1543 aa4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 TRPM3Q9HCF6 1732 aaPredicted RBP4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 FMN2Q9NZ56 1722 aa4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 PARP4Q9UKK3 1724 aaKnown RBP4.41□□□□□ -1.7
SNORA48.8-201ENST00000391324 KANK1Q14678 1352 aa4.4□□□□□ -1.7
SNORA48.8-201ENST00000391324 PLEKHH1Q9ULM0 1364 aa4.4□□□□□ -1.7
SNORA48.8-201ENST00000391324 CCDC144AA2RUR9 1427 aa4.4□□□□□ -1.7
SNORA48.8-201ENST00000391324 PRAG1Q86YV5 1406 aa4.4□□□□□ -1.7
SNORA48.8-201ENST00000391324 LARP1Q6PKG0 1096 aaKnown RBP4.4□□□□□ -1.71
SNORA48.8-201ENST00000391324 TMED8Q6PL24 325 aaPredicted RBP4.4□□□□□ -1.71
SNORA48.8-201ENST00000391324 RGS22Q8NE09 1264 aa4.4□□□□□ -1.71
SNORA48.8-201ENST00000391324 CCER1Q8TC90 406 aaPredicted RBP4.4□□□□□ -1.71
SNORA48.8-201ENST00000391324 E9PCH4 1651 aa4.4□□□□□ -1.71
SNORA48.8-201ENST00000391324 KIF1AQ12756 1690 aa4.39□□□□□ -1.71
SNORA48.8-201ENST00000391324 ALS2Q96Q42 1657 aa4.39□□□□□ -1.71
SNORA48.8-201ENST00000391324 ATP7BP35670 1465 aa4.39□□□□□ -1.71
SNORA48.8-201ENST00000391324 HMGB1P1B2RPK0 211 aaPredicted RBP4.39□□□□□ -1.71
SNORA48.8-201ENST00000391324 RRP9O43818 475 aaKnown RBP4.39□□□□□ -1.71
SNORA48.8-201ENST00000391324 ANP32AP39687 249 aaKnown RBP4.39□□□□□ -1.71
SNORA48.8-201ENST00000391324 LBX1P52954 281 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms