RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 KRT24Q2M2I5 525 aa26.18■■□□□ 1.78
COL23A1-201ENST00000390654 TWISTNBQ3B726 338 aaPredicted RBP26.18■■□□□ 1.78
COL23A1-201ENST00000390654 PIK3C2BO00750 1634 aa26.18■■□□□ 1.78
COL23A1-201ENST00000390654 DIP2CQ9Y2E4 1556 aa26.18■■□□□ 1.78
COL23A1-201ENST00000390654 BMP2KLQ5H9B9 411 aa26.18■■□□□ 1.78
COL23A1-201ENST00000390654 C16orf71Q8IYS4 520 aaPredicted RBP26.18■■□□□ 1.78
COL23A1-201ENST00000390654 GRPEL1Q9HAV7 217 aa26.17■■□□□ 1.78
COL23A1-201ENST00000390654 DDX11L8A8MPP1 907 aa26.16■■□□□ 1.78
COL23A1-201ENST00000390654 NAP1L5Q96NT1 182 aaPredicted RBP26.16■■□□□ 1.78
COL23A1-201ENST00000390654 GAS2L3Q86XJ1 694 aa26.16■■□□□ 1.78
COL23A1-201ENST00000390654 PTPRMP28827 1452 aa26.16■■□□□ 1.78
COL23A1-201ENST00000390654 LRRC7Q96NW7 1537 aa26.15■■□□□ 1.78
COL23A1-201ENST00000390654 SSFA2P28290 1259 aa26.14■■□□□ 1.77
COL23A1-201ENST00000390654 GAS2L2Q8NHY3 880 aa26.13■■□□□ 1.77
COL23A1-201ENST00000390654 PNPLA6Q8IY17 1366 aa26.13■■□□□ 1.77
COL23A1-201ENST00000390654 MRE11P49959 708 aa26.12■■□□□ 1.77
COL23A1-201ENST00000390654 GCC1Q96CN9 775 aa26.12■■□□□ 1.77
COL23A1-201ENST00000390654 OTUD7AQ8TE49 926 aaPredicted RBP26.12■■□□□ 1.77
COL23A1-201ENST00000390654 GNAI1P63096 354 aa26.11■■□□□ 1.77
COL23A1-201ENST00000390654 DDIT3P35638 169 aa26.11■■□□□ 1.77
COL23A1-201ENST00000390654 SNX21Q969T3 373 aa26.11■■□□□ 1.77
COL23A1-201ENST00000390654 GSPT1P15170 499 aaKnown RBP26.1■■□□□ 1.77
COL23A1-201ENST00000390654 K7ELQ4 463 aaPredicted RBP26.09■■□□□ 1.77
COL23A1-201ENST00000390654 SMARCA5O60264 1052 aaPredicted RBP26.09■■□□□ 1.77
COL23A1-201ENST00000390654 GBP4Q96PP9 640 aa26.09■■□□□ 1.77
COL23A1-201ENST00000390654 NEO1Q92859 1461 aa26.08■■□□□ 1.77
COL23A1-201ENST00000390654 IL13P35225 146 aa26.08■■□□□ 1.77
COL23A1-201ENST00000390654 CFAP74Q9C0B2 1584 aa26.08■■□□□ 1.77
COL23A1-201ENST00000390654 ESF1Q9H501 851 aaKnown RBP26.08■■□□□ 1.77
COL23A1-201ENST00000390654 FAM135BQ49AJ0 1406 aa26.08■■□□□ 1.77
COL23A1-201ENST00000390654 RAB3GAP1Q15042 981 aa26.08■■□□□ 1.76
COL23A1-201ENST00000390654 AEBP1Q8IUX7 1158 aa26.08■■□□□ 1.76
COL23A1-201ENST00000390654 IFT57Q9NWB7 429 aa26.06■■□□□ 1.76
COL23A1-201ENST00000390654 NCLP19338 710 aaKnown RBP26.05■■□□□ 1.76
COL23A1-201ENST00000390654 NUDT16Q96DE0 195 aaKnown RBP26.04■■□□□ 1.76
COL23A1-201ENST00000390654 ERBB4Q15303 1308 aa26.04■■□□□ 1.76
COL23A1-201ENST00000390654 CDC45O75419 566 aa26.04■■□□□ 1.76
COL23A1-201ENST00000390654 MCM10Q7L590 875 aa26.04■■□□□ 1.76
COL23A1-201ENST00000390654 PLEKHM2Q8IWE5 1019 aa26.03■■□□□ 1.76
COL23A1-201ENST00000390654 COG3Q96JB2 828 aa26.03■■□□□ 1.76
COL23A1-201ENST00000390654 MIS18AQ9NYP9 233 aa26.03■■□□□ 1.76
COL23A1-201ENST00000390654 NCOA3Q9Y6Q9 1424 aa26.03■■□□□ 1.76
COL23A1-201ENST00000390654 CFAP44Q96MT7 982 aa26.03■■□□□ 1.76
COL23A1-201ENST00000390654 ABCC4O15439 1325 aa26.03■■□□□ 1.76
COL23A1-201ENST00000390654 ARHGAP31Q2M1Z3 1444 aa26.02■■□□□ 1.76
COL23A1-201ENST00000390654 WASLO00401 505 aaPredicted RBP26.02■■□□□ 1.76
COL23A1-201ENST00000390654 CALD1Q05682 793 aaKnown RBP26.02■■□□□ 1.76
COL23A1-201ENST00000390654 TRIM44Q96DX7 344 aaPredicted RBP26.01■■□□□ 1.75
COL23A1-201ENST00000390654 ALKQ9UM73 1620 aa26.01■■□□□ 1.75
COL23A1-201ENST00000390654 TSPOAP1O95153 1857 aa26.01■■□□□ 1.75
COL23A1-201ENST00000390654 PKP1Q13835 747 aa26.01■■□□□ 1.75
COL23A1-201ENST00000390654 ARHGAP45Q92619 1136 aa26.01■■□□□ 1.75
COL23A1-201ENST00000390654 ARHGEF40Q8TER5 1519 aa26.01■■□□□ 1.75
COL23A1-201ENST00000390654 CHAMP1Q96JM3 812 aa26.01■■□□□ 1.75
COL23A1-201ENST00000390654 ZNF853P0CG23 659 aa26■■□□□ 1.75
COL23A1-201ENST00000390654 SULT6B1Q6IMI4 303 aa26■■□□□ 1.75
COL23A1-201ENST00000390654 DDX49Q9Y6V7 483 aaKnown RBP26■■□□□ 1.75
COL23A1-201ENST00000390654 ZFYVE9O95405 1425 aa26■■□□□ 1.75
COL23A1-201ENST00000390654 FOXD4L5Q5VV16 416 aaPredicted RBP26■■□□□ 1.75
COL23A1-201ENST00000390654 FOXD4L4Q8WXT5 416 aaPredicted RBP26■■□□□ 1.75
COL23A1-201ENST00000390654 ZNF428Q96B54 188 aa26■■□□□ 1.75
COL23A1-201ENST00000390654 METP08581 1390 aa25.99■■□□□ 1.75
COL23A1-201ENST00000390654 TMEM131LA2VDJ0 1609 aa25.99■■□□□ 1.75
COL23A1-201ENST00000390654 API5Q9BZZ5 524 aaKnown RBP25.99■■□□□ 1.75
COL23A1-201ENST00000390654 MED14O60244 1454 aa25.98■■□□□ 1.75
COL23A1-201ENST00000390654 BRPF1P55201 1214 aaPredicted RBP25.98■■□□□ 1.75
COL23A1-201ENST00000390654 MCTP1Q6DN14 999 aa25.98■■□□□ 1.75
COL23A1-201ENST00000390654 CHMP4BQ9H444 224 aaKnown RBP25.98■■□□□ 1.75
COL23A1-201ENST00000390654 RIMS2Q9UQ26 1411 aa25.98■■□□□ 1.75
COL23A1-201ENST00000390654 CIZ1Q9ULV3 898 aaPredicted RBP25.98■■□□□ 1.75
COL23A1-201ENST00000390654 AK9Q5TCS8 1911 aa25.97■■□□□ 1.75
COL23A1-201ENST00000390654 ESPNB1AK53 854 aa25.97■■□□□ 1.75
COL23A1-201ENST00000390654 SLC4A10Q6U841 1118 aa25.97■■□□□ 1.75
COL23A1-201ENST00000390654 PREX1Q8TCU6 1659 aa25.97■■□□□ 1.75
COL23A1-201ENST00000390654 CLCN1P35523 988 aa25.96■■□□□ 1.75
COL23A1-201ENST00000390654 PTCH1Q13635 1447 aa25.96■■□□□ 1.75
COL23A1-201ENST00000390654 TSHZ3Q63HK5 1081 aa25.96■■□□□ 1.75
COL23A1-201ENST00000390654 MEIS3Q99687 375 aa25.95■■□□□ 1.75
COL23A1-201ENST00000390654 MAP2P11137 1827 aaKnown RBP25.95■■□□□ 1.74
COL23A1-201ENST00000390654 PLEKHG5O94827 1062 aa25.94■■□□□ 1.74
COL23A1-201ENST00000390654 BAG4O95429 457 aaKnown RBP25.94■■□□□ 1.74
COL23A1-201ENST00000390654 TTC22Q5TAA0 569 aa25.94■■□□□ 1.74
COL23A1-201ENST00000390654 DCTPP1Q9H773 170 aa25.94■■□□□ 1.74
COL23A1-201ENST00000390654 RICTORQ6R327 1708 aa25.93■■□□□ 1.74
COL23A1-201ENST00000390654 SDSP20132 328 aa25.93■■□□□ 1.74
COL23A1-201ENST00000390654 ZGPATQ8N5A5 531 aaKnown RBP25.93■■□□□ 1.74
COL23A1-201ENST00000390654 SLC26A8Q96RN1 970 aa25.93■■□□□ 1.74
COL23A1-201ENST00000390654 F6X3S4 739 aa25.92■■□□□ 1.74
COL23A1-201ENST00000390654 GOLGA6L22H0YM25 854 aa25.92■■□□□ 1.74
COL23A1-201ENST00000390654 CCDC61Q9Y6R9 512 aa25.92■■□□□ 1.74
COL23A1-201ENST00000390654 LMOD3Q0VAK6 560 aa25.91■■□□□ 1.74
COL23A1-201ENST00000390654 HSP90AB2PQ58FF8 381 aa25.91■■□□□ 1.74
COL23A1-201ENST00000390654 CAVIN1Q6NZI2 390 aaKnown RBP25.91■■□□□ 1.74
COL23A1-201ENST00000390654 NOL8Q76FK4 1167 aaKnown RBP25.91■■□□□ 1.74
COL23A1-201ENST00000390654 PIK3R4Q99570 1358 aa25.91■■□□□ 1.74
COL23A1-201ENST00000390654 USP26Q9BXU7 913 aa25.9■■□□□ 1.74
COL23A1-201ENST00000390654 SKOR2Q2VWA4 1001 aaPredicted RBP25.89■■□□□ 1.74
COL23A1-201ENST00000390654 NECTIN2Q92692 538 aa25.89■■□□□ 1.74
COL23A1-201ENST00000390654 SLC4A2P04920 1241 aa25.89■■□□□ 1.74
COL23A1-201ENST00000390654 CEP85Q6P2H3 762 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms