RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 UPF3BQ9BZI7 483 aaKnown RBP14.8□□□□□ -0.04
FANCA-202ENST00000389301 PDCL3Q9H2J4 239 aa14.8□□□□□ -0.04
FANCA-202ENST00000389301 CENPHQ9H3R5 247 aa14.8□□□□□ -0.04
FANCA-202ENST00000389301 NBPF1Q3BBV0 1214 aa14.79□□□□□ -0.04
FANCA-202ENST00000389301 RRBP1Q9P2E9 1410 aaKnown RBP14.79□□□□□ -0.04
FANCA-202ENST00000389301 TBC1D2BQ9UPU7 963 aa14.79□□□□□ -0.04
FANCA-202ENST00000389301 TMCO3Q6UWJ1 677 aa14.79□□□□□ -0.04
FANCA-202ENST00000389301 STK11IPQ8N1F8 1099 aa14.79□□□□□ -0.04
FANCA-202ENST00000389301 MAP3K11Q16584 847 aa14.79□□□□□ -0.04
FANCA-202ENST00000389301 NCOA2Q15596 1464 aa14.79□□□□□ -0.04
FANCA-202ENST00000389301 PSME1Q06323 249 aa14.79□□□□□ -0.04
FANCA-202ENST00000389301 CDK5RAP3Q96JB5 506 aa14.79□□□□□ -0.04
FANCA-202ENST00000389301 GOLGA6L7A0A1B0GV03 622 aa14.78□□□□□ -0.04
FANCA-202ENST00000389301 CAMK4Q16566 473 aa14.78□□□□□ -0.04
FANCA-202ENST00000389301 CCT4P50991 539 aaKnown RBP14.78□□□□□ -0.04
FANCA-202ENST00000389301 SYTL4Q96C24 671 aaPredicted RBP14.78□□□□□ -0.04
FANCA-202ENST00000389301 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.78□□□□□ -0.046e-7■■■■■ 115.2
FANCA-202ENST00000389301 JAKMIP1Q96N16 626 aaKnown RBP14.78□□□□□ -0.04
FANCA-202ENST00000389301 ZSCAN31Q96LW9 406 aaPredicted RBP14.78□□□□□ -0.04
FANCA-202ENST00000389301 SCAPERQ9BY12 1400 aa14.78□□□□□ -0.04
FANCA-202ENST00000389301 CFAP70Q5T0N1 1121 aa14.77□□□□□ -0.04
FANCA-202ENST00000389301 SAMD1Q6SPF0 538 aaPredicted RBP14.77□□□□□ -0.04
FANCA-202ENST00000389301 CFAP45Q9UL16 551 aa14.77□□□□□ -0.04
FANCA-202ENST00000389301 PTPN14Q15678 1187 aa14.77□□□□□ -0.05
FANCA-202ENST00000389301 GAS2L2Q8NHY3 880 aa14.77□□□□□ -0.05
FANCA-202ENST00000389301 RAPGEF4Q8WZA2 1011 aa14.77□□□□□ -0.05
FANCA-202ENST00000389301 BLOC1S2Q6QNY1 142 aa14.77□□□□□ -0.05
FANCA-202ENST00000389301 PTPRGP23470 1445 aa14.76□□□□□ -0.05
FANCA-202ENST00000389301 PPP6R1Q9UPN7 881 aa14.76□□□□□ -0.05
FANCA-202ENST00000389301 FYCO1Q9BQS8 1478 aa14.76□□□□□ -0.05
FANCA-202ENST00000389301 WDR97A6NE52 1622 aa14.76□□□□□ -0.05
FANCA-202ENST00000389301 NUTM2GQ5VZR2 741 aa14.76□□□□□ -0.05
FANCA-202ENST00000389301 CCAR1Q8IX12 1150 aaKnown RBP14.76□□□□□ -0.05
FANCA-202ENST00000389301 SRCIN1Q9C0H9 1055 aa14.76□□□□□ -0.05
FANCA-202ENST00000389301 NEFHP12036 1026 aa14.75□□□□□ -0.05
FANCA-202ENST00000389301 SLFN5Q08AF3 891 aa14.75□□□□□ -0.05
FANCA-202ENST00000389301 SMTNL1A8MU46 457 aa14.75□□□□□ -0.05
FANCA-202ENST00000389301 CWC27Q6UX04 472 aaKnown RBP14.75□□□□□ -0.05
FANCA-202ENST00000389301 IQCEQ6IPM2 695 aa14.75□□□□□ -0.05
FANCA-202ENST00000389301 LUC7LQ9NQ29 371 aaKnown RBP14.75□□□□□ -0.05
FANCA-202ENST00000389301 LRRFIP2Q9Y608 721 aaKnown RBP14.75□□□□□ -0.05
FANCA-202ENST00000389301 SSFA2P28290 1259 aa14.74□□□□□ -0.05
FANCA-202ENST00000389301 STIM1Q13586 685 aa14.74□□□□□ -0.05
FANCA-202ENST00000389301 CGNQ9P2M7 1197 aaKnown RBP14.74□□□□□ -0.05
FANCA-202ENST00000389301 IGF1RP08069 1367 aa14.74□□□□□ -0.05
FANCA-202ENST00000389301 KIF2AO00139 706 aaPredicted RBP14.74□□□□□ -0.05
FANCA-202ENST00000389301 CCDC183Q5T5S1 534 aa14.74□□□□□ -0.05
FANCA-202ENST00000389301 TAX1BP1Q86VP1 789 aa14.74□□□□□ -0.05
FANCA-202ENST00000389301 TNPO1Q92973 898 aaKnown RBP14.74□□□□□ -0.05
FANCA-202ENST00000389301 TBC1D2Q9BYX2 928 aa14.74□□□□□ -0.05
FANCA-202ENST00000389301 SIL1Q9H173 461 aa14.74□□□□□ -0.05
FANCA-202ENST00000389301 ENOX2Q16206 610 aaKnown RBP14.74□□□□□ -0.05
FANCA-202ENST00000389301 TTC39AQ5SRH9 613 aa14.74□□□□□ -0.05
FANCA-202ENST00000389301 C20orf194Q5TEA3 1177 aa14.74□□□□□ -0.05
FANCA-202ENST00000389301 SYCP1Q15431 976 aa14.74□□□□□ -0.05
FANCA-202ENST00000389301 ZHX1Q9UKY1 873 aaPredicted RBP14.74□□□□□ -0.05
FANCA-202ENST00000389301 KRT18P05783 430 aaKnown RBP14.73□□□□□ -0.05
FANCA-202ENST00000389301 TMEM57Q8N5G2 664 aa14.73□□□□□ -0.05
FANCA-202ENST00000389301 TRIM22Q8IYM9 498 aa14.73□□□□□ -0.05
FANCA-202ENST00000389301 TANGO6Q9C0B7 1094 aa14.73□□□□□ -0.05
FANCA-202ENST00000389301 CFAP100Q494V2 611 aa14.73□□□□□ -0.05
FANCA-202ENST00000389301 UBE2Q2Q8WVN8 375 aa14.73□□□□□ -0.05
FANCA-202ENST00000389301 ARHGAP29Q52LW3 1261 aa14.73□□□□□ -0.05
FANCA-202ENST00000389301 TXLNBQ8N3L3 684 aa14.73□□□□□ -0.05
FANCA-202ENST00000389301 RBM33Q96EV2 1170 aaKnown RBP14.73□□□□□ -0.05
FANCA-202ENST00000389301 EPB41L2O43491 1005 aaKnown RBP14.72□□□□□ -0.05
FANCA-202ENST00000389301 ZRSR2Q15696 482 aaKnown RBP14.72□□□□□ -0.05
FANCA-202ENST00000389301 KIF18AQ8NI77 898 aa14.72□□□□□ -0.05
FANCA-202ENST00000389301 TRERF1Q96PN7 1200 aa14.72□□□□□ -0.05
FANCA-202ENST00000389301 CASTP20810 708 aaKnown RBP14.72□□□□□ -0.05
FANCA-202ENST00000389301 HDGFL1Q5TGJ6 251 aa14.72□□□□□ -0.05
FANCA-202ENST00000389301 SFPQP23246 707 aaKnown RBP eCLIP14.72□□□□□ -0.05
FANCA-202ENST00000389301 CCDC158Q5M9N0 1113 aa14.72□□□□□ -0.05
FANCA-202ENST00000389301 SLC12A5Q9H2X9 1139 aa14.72□□□□□ -0.05
FANCA-202ENST00000389301 PPP4R3BQ5MIZ7 849 aa14.72□□□□□ -0.05
FANCA-202ENST00000389301 FERMT3Q86UX7 667 aa14.72□□□□□ -0.05
FANCA-202ENST00000389301 USP25Q9UHP3 1055 aa14.72□□□□□ -0.05
FANCA-202ENST00000389301 CALCOCO1Q9P1Z2 691 aa14.72□□□□□ -0.05
FANCA-202ENST00000389301 IL1RAPL2Q9NP60 686 aa14.71□□□□□ -0.05
FANCA-202ENST00000389301 CASKIN1Q8WXD9 1431 aa14.71□□□□□ -0.05
FANCA-202ENST00000389301 NLRP6P59044 892 aa14.71□□□□□ -0.05
FANCA-202ENST00000389301 SEPT7Q16181 437 aaKnown RBP14.71□□□□□ -0.05
FANCA-202ENST00000389301 AACSQ86V21 672 aa14.71□□□□□ -0.05
FANCA-202ENST00000389301 GIMAP7Q8NHV1 300 aa14.71□□□□□ -0.05
FANCA-202ENST00000389301 ZMYND15Q9H091 742 aa14.71□□□□□ -0.05
FANCA-202ENST00000389301 GBP3Q9H0R5 595 aa14.71□□□□□ -0.05
FANCA-202ENST00000389301 NLRP2Q9NX02 1062 aa14.71□□□□□ -0.05
FANCA-202ENST00000389301 CCDC69A6NI79 296 aa14.71□□□□□ -0.06
FANCA-202ENST00000389301 TNNT1P13805 278 aa14.71□□□□□ -0.06
FANCA-202ENST00000389301 CRACR2AQ9BSW2 395 aa14.71□□□□□ -0.06
FANCA-202ENST00000389301 ERBINQ96RT1 1412 aa14.7□□□□□ -0.06
FANCA-202ENST00000389301 POLR3GO15318 223 aaPredicted RBP14.7□□□□□ -0.06
FANCA-202ENST00000389301 CCDC83Q8IWF9 413 aa14.7□□□□□ -0.06
FANCA-202ENST00000389301 DDX11Q96FC9 970 aa14.7□□□□□ -0.06
FANCA-202ENST00000389301 URI1O94763 535 aaPredicted RBP14.7□□□□□ -0.06
FANCA-202ENST00000389301 KIAA1328Q86T90 577 aa14.7□□□□□ -0.06
FANCA-202ENST00000389301 CCDC148Q8NFR7 591 aa14.7□□□□□ -0.06
FANCA-202ENST00000389301 ZNF428Q96B54 188 aa14.7□□□□□ -0.06
FANCA-202ENST00000389301 CLIP2Q9UDT6 1046 aa14.7□□□□□ -0.06
FANCA-202ENST00000389301 SHTN1A0MZ66 631 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms