RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 FER1L4A9Z1Z3 1794 aa7.87□□□□□ -1.15
ERCC4-202ENST00000389138 ARHGEF40Q8TER5 1519 aa7.86□□□□□ -1.15
ERCC4-202ENST00000389138 HSPA2P54652 639 aa7.86□□□□□ -1.15
ERCC4-202ENST00000389138 ANKRD13DQ6ZTN6 518 aa7.86□□□□□ -1.15
ERCC4-202ENST00000389138 DPH6Q7L8W6 267 aa7.86□□□□□ -1.15
ERCC4-202ENST00000389138 RBM46Q8TBY0 533 aaKnown RBP7.86□□□□□ -1.15
ERCC4-202ENST00000389138 ADAMTS19Q8TE59 1207 aa7.86□□□□□ -1.15
ERCC4-202ENST00000389138 IGF1RP08069 1367 aa7.86□□□□□ -1.15
ERCC4-202ENST00000389138 UGGT2Q9NYU1 1516 aa7.86□□□□□ -1.15
ERCC4-202ENST00000389138 LAPTM4BQ86VI4 370 aa7.85□□□□□ -1.15
ERCC4-202ENST00000389138 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.85□□□□□ -1.15
ERCC4-202ENST00000389138 ADGRG1Q9Y653 693 aa7.85□□□□□ -1.15
ERCC4-202ENST00000389138 TATDN2Q93075 761 aa7.85□□□□□ -1.15
ERCC4-202ENST00000389138 SGSM3Q96HU1 749 aa7.85□□□□□ -1.15
ERCC4-202ENST00000389138 STAC3Q96MF2 364 aa7.85□□□□□ -1.15
ERCC4-202ENST00000389138 FAM198AQ9UFP1 575 aa7.85□□□□□ -1.15
ERCC4-202ENST00000389138 SIGLEC1Q9BZZ2 1709 aa7.85□□□□□ -1.15
ERCC4-202ENST00000389138 ABCA9Q8IUA7 1624 aa7.84□□□□□ -1.15
ERCC4-202ENST00000389138 NAP1L5Q96NT1 182 aaPredicted RBP7.84□□□□□ -1.15
ERCC4-202ENST00000389138 BCL2L13Q9BXK5 485 aa7.84□□□□□ -1.15
ERCC4-202ENST00000389138 PNMA3Q9UL41 463 aa7.84□□□□□ -1.15
ERCC4-202ENST00000389138 BHMG1C9JSJ3 638 aaPredicted RBP7.84□□□□□ -1.16
ERCC4-202ENST00000389138 MAFGO15525 162 aa7.84□□□□□ -1.16
ERCC4-202ENST00000389138 GIPC2Q8TF65 315 aa7.84□□□□□ -1.16
ERCC4-202ENST00000389138 TTC37Q6PGP7 1564 aa7.83□□□□□ -1.16
ERCC4-202ENST00000389138 RICTORQ6R327 1708 aa7.83□□□□□ -1.16
ERCC4-202ENST00000389138 HRO43593 1189 aa7.83□□□□□ -1.16
ERCC4-202ENST00000389138 ANAPC15P60006 121 aa7.83□□□□□ -1.16
ERCC4-202ENST00000389138 NUDT18Q6ZVK8 323 aa7.83□□□□□ -1.16
ERCC4-202ENST00000389138 TBC1D2Q9BYX2 928 aa7.83□□□□□ -1.16
ERCC4-202ENST00000389138 POLR3EQ9NVU0 708 aa7.83□□□□□ -1.16
ERCC4-202ENST00000389138 ABCA8O94911 1581 aa7.83□□□□□ -1.16
ERCC4-202ENST00000389138 SBNO2Q9Y2G9 1366 aa7.83□□□□□ -1.16
ERCC4-202ENST00000389138 HSP90AB4PQ58FF6 505 aa7.82□□□□□ -1.16
ERCC4-202ENST00000389138 MTMR14Q8NCE2 650 aa7.82□□□□□ -1.16
ERCC4-202ENST00000389138 PLCD4Q9BRC7 762 aa7.82□□□□□ -1.16
ERCC4-202ENST00000389138 KIF27Q86VH2 1401 aa7.82□□□□□ -1.16
ERCC4-202ENST00000389138 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.82□□□□□ -1.16
ERCC4-202ENST00000389138 ZEB1P37275 1124 aaPredicted RBP7.82□□□□□ -1.16
ERCC4-202ENST00000389138 EYA1Q99502 592 aa7.82□□□□□ -1.16
ERCC4-202ENST00000389138 KLHL42Q9P2K6 505 aa7.82□□□□□ -1.16
ERCC4-202ENST00000389138 CTTNBP2Q8WZ74 1663 aa7.81□□□□□ -1.16
ERCC4-202ENST00000389138 SETQ01105 290 aaPredicted RBP7.81□□□□□ -1.16
ERCC4-202ENST00000389138 MRPL50Q8N5N7 158 aaKnown RBP7.81□□□□□ -1.16
ERCC4-202ENST00000389138 PXYLP1Q8TE99 480 aa7.81□□□□□ -1.16
ERCC4-202ENST00000389138 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.81□□□□□ -1.16
ERCC4-202ENST00000389138 PEX14O75381 377 aa7.81□□□□□ -1.16
ERCC4-202ENST00000389138 MAP4K4O95819 1239 aaPredicted RBP7.81□□□□□ -1.16
ERCC4-202ENST00000389138 FAM98CQ17RN3 349 aaKnown RBP7.81□□□□□ -1.16
ERCC4-202ENST00000389138 GORABQ5T7V8 394 aa7.81□□□□□ -1.16
ERCC4-202ENST00000389138 METTL3Q86U44 580 aaKnown RBP7.81□□□□□ -1.16
ERCC4-202ENST00000389138 VTI1AQ96AJ9 217 aa7.81□□□□□ -1.16
ERCC4-202ENST00000389138 PHLDB1Q86UU1 1377 aa7.81□□□□□ -1.16
ERCC4-202ENST00000389138 IQSEC2Q5JU85 1478 aa7.8□□□□□ -1.16
ERCC4-202ENST00000389138 FAM50AQ14320 339 aaKnown RBP7.8□□□□□ -1.16
ERCC4-202ENST00000389138 EVI5LQ96CN4 794 aa7.8□□□□□ -1.16
ERCC4-202ENST00000389138 NEO1Q92859 1461 aa7.8□□□□□ -1.16
ERCC4-202ENST00000389138 CARMIL1Q5VZK9 1371 aa7.79□□□□□ -1.16
ERCC4-202ENST00000389138 DNAJB2P25686 324 aa7.79□□□□□ -1.16
ERCC4-202ENST00000389138 RECKO95980 971 aa7.79□□□□□ -1.16
ERCC4-202ENST00000389138 ABL2P42684 1182 aa7.79□□□□□ -1.16
ERCC4-202ENST00000389138 LAS1LQ9Y4W2 734 aaKnown RBP7.79□□□□□ -1.16
ERCC4-202ENST00000389138 LTBP4Q8N2S1 1624 aa7.79□□□□□ -1.16
ERCC4-202ENST00000389138 HDGFP51858 240 aaKnown RBP7.78□□□□□ -1.16
ERCC4-202ENST00000389138 SF3A1Q15459 793 aaKnown RBP7.78□□□□□ -1.16
ERCC4-202ENST00000389138 HDGFL1Q5TGJ6 251 aa7.78□□□□□ -1.16
ERCC4-202ENST00000389138 APBB1IPQ7Z5R6 666 aaPredicted RBP7.78□□□□□ -1.16
ERCC4-202ENST00000389138 PPARGC1BQ86YN6 1023 aaKnown RBP7.78□□□□□ -1.16
ERCC4-202ENST00000389138 LARGE2Q8N3Y3 721 aa7.78□□□□□ -1.16
ERCC4-202ENST00000389138 FANCAO15360 1455 aa7.78□□□□□ -1.16
ERCC4-202ENST00000389138 YEATS2Q9ULM3 1422 aa7.78□□□□□ -1.16
ERCC4-202ENST00000389138 GOLGA8CPA6NN73 597 aa7.78□□□□□ -1.16
ERCC4-202ENST00000389138 PARNO95453 639 aaKnown RBP7.78□□□□□ -1.16
ERCC4-202ENST00000389138 RFC5P40937 340 aa7.78□□□□□ -1.16
ERCC4-202ENST00000389138 TAGLNQ01995 201 aaKnown RBP7.78□□□□□ -1.16
ERCC4-202ENST00000389138 FOXD4L6Q3SYB3 417 aaPredicted RBP7.78□□□□□ -1.16
ERCC4-202ENST00000389138 FOXD4L3Q6VB84 417 aaPredicted RBP7.78□□□□□ -1.16
ERCC4-202ENST00000389138 RAPGEF3O95398 923 aa7.77□□□□□ -1.17
ERCC4-202ENST00000389138 ERCC3P19447 782 aa7.77□□□□□ -1.17
ERCC4-202ENST00000389138 FAM161AQ3B820 660 aa7.77□□□□□ -1.17
ERCC4-202ENST00000389138 BANK1Q8NDB2 785 aa7.77□□□□□ -1.17
ERCC4-202ENST00000389138 ATP1B4Q9UN42 357 aaPredicted RBP7.77□□□□□ -1.17
ERCC4-202ENST00000389138 TBC1D2BQ9UPU7 963 aa7.77□□□□□ -1.17
ERCC4-202ENST00000389138 RCCD1A6NED2 376 aa7.76□□□□□ -1.17
ERCC4-202ENST00000389138 C3orf80F5H4A9 247 aa7.76□□□□□ -1.17
ERCC4-202ENST00000389138 SLC4A3P48751 1232 aa7.76□□□□□ -1.17
ERCC4-202ENST00000389138 SPTY2D1Q68D10 685 aaPredicted RBP7.76□□□□□ -1.17
ERCC4-202ENST00000389138 PHLDB3Q6NSJ2 640 aa7.76□□□□□ -1.17
ERCC4-202ENST00000389138 NPAS4Q8IUM7 802 aa7.76□□□□□ -1.17
ERCC4-202ENST00000389138 CNPY4Q8N129 248 aa7.76□□□□□ -1.17
ERCC4-202ENST00000389138 SEPT9Q9UHD8 586 aaPredicted RBP7.76□□□□□ -1.17
ERCC4-202ENST00000389138 MED1Q15648 1581 aaPredicted RBP7.76□□□□□ -1.17
ERCC4-202ENST00000389138 ZMYM4Q5VZL5 1548 aa7.76□□□□□ -1.17
ERCC4-202ENST00000389138 SMAPO00193 183 aa7.76□□□□□ -1.17
ERCC4-202ENST00000389138 DNAJC2Q99543 621 aaKnown RBP7.76□□□□□ -1.17
ERCC4-202ENST00000389138 PPP1R12CQ9BZL4 782 aa7.76□□□□□ -1.17
ERCC4-202ENST00000389138 POGZQ7Z3K3 1410 aa7.76□□□□□ -1.17
ERCC4-202ENST00000389138 CLCN1P35523 988 aa7.75□□□□□ -1.17
ERCC4-202ENST00000389138 CDCA8Q53HL2 280 aa7.75□□□□□ -1.17
ERCC4-202ENST00000389138 TMTC2Q8N394 836 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms