RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 NRKQ7Z2Y5 1582 aa19.01■□□□□ 0.63
SCFD2-201ENST00000388940 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.01■□□□□ 0.63
SCFD2-201ENST00000388940 IFT57Q9NWB7 429 aa19.01■□□□□ 0.63
SCFD2-201ENST00000388940 ZRANB1Q9UGI0 708 aa19.01■□□□□ 0.63
SCFD2-201ENST00000388940 ROBO2Q9HCK4 1378 aa19.01■□□□□ 0.63
SCFD2-201ENST00000388940 HMOX1P09601 288 aa19■□□□□ 0.63
SCFD2-201ENST00000388940 ZNF853P0CG23 659 aa19■□□□□ 0.63
SCFD2-201ENST00000388940 GNAI1P63096 354 aa19■□□□□ 0.63
SCFD2-201ENST00000388940 ZBTB40Q9NUA8 1239 aa19■□□□□ 0.63
SCFD2-201ENST00000388940 SEC24BO95487 1268 aa19■□□□□ 0.63
SCFD2-201ENST00000388940 SLC4A3P48751 1232 aa19■□□□□ 0.63
SCFD2-201ENST00000388940 LMOD3Q0VAK6 560 aa19■□□□□ 0.63
SCFD2-201ENST00000388940 TMEM57Q8N5G2 664 aa19■□□□□ 0.63
SCFD2-201ENST00000388940 NCKAP5LQ9HCH0 1330 aa18.99■□□□□ 0.63
SCFD2-201ENST00000388940 ARHGAP45Q92619 1136 aa18.99■□□□□ 0.63
SCFD2-201ENST00000388940 SMC5Q8IY18 1101 aa18.98■□□□□ 0.63
SCFD2-201ENST00000388940 VAMP4O75379 141 aa18.98■□□□□ 0.63
SCFD2-201ENST00000388940 PLEKHG3A1L390 1219 aa18.97■□□□□ 0.63
SCFD2-201ENST00000388940 PIK3R4Q99570 1358 aa18.96■□□□□ 0.63
SCFD2-201ENST00000388940 PTCH1Q13635 1447 aa18.96■□□□□ 0.63
SCFD2-201ENST00000388940 MRPL50Q8N5N7 158 aaKnown RBP18.96■□□□□ 0.63
SCFD2-201ENST00000388940 CHMP4BQ9H444 224 aaKnown RBP18.96■□□□□ 0.63
SCFD2-201ENST00000388940 NALCNQ8IZF0 1738 aa18.95■□□□□ 0.62
SCFD2-201ENST00000388940 TTC21BQ7Z4L5 1316 aa18.95■□□□□ 0.62
SCFD2-201ENST00000388940 RRS1Q15050 365 aaKnown RBP18.94■□□□□ 0.62
SCFD2-201ENST00000388940 CFAP44Q96MT7 982 aa18.94■□□□□ 0.62
SCFD2-201ENST00000388940 UPF2Q9HAU5 1272 aaKnown RBP18.94■□□□□ 0.62
SCFD2-201ENST00000388940 OVOS2A0A0J9YW53 1432 aa18.94■□□□□ 0.62
SCFD2-201ENST00000388940 OVOS2Q6IE36 1432 aa18.94■□□□□ 0.62
SCFD2-201ENST00000388940 LTKP29376 864 aa18.94■□□□□ 0.62
SCFD2-201ENST00000388940 MBIPQ9NS73 344 aa18.93■□□□□ 0.62
SCFD2-201ENST00000388940 NFKBIBQ15653 356 aa18.93■□□□□ 0.62
SCFD2-201ENST00000388940 TBC1D32Q96NH3 1257 aa18.93■□□□□ 0.62
SCFD2-201ENST00000388940 THUMPD2Q9BTF0 503 aaKnown RBP18.93■□□□□ 0.62
SCFD2-201ENST00000388940 SLIT1O75093 1534 aa18.92■□□□□ 0.62
SCFD2-201ENST00000388940 BECN1Q14457 450 aa18.92■□□□□ 0.62
SCFD2-201ENST00000388940 USP6P35125 1406 aa18.92■□□□□ 0.62
SCFD2-201ENST00000388940 ACEP12821 1306 aa18.92■□□□□ 0.62
SCFD2-201ENST00000388940 ARHGAP23Q9P227 1491 aa18.91■□□□□ 0.62
SCFD2-201ENST00000388940 PTPRUQ92729 1446 aa18.91■□□□□ 0.62
SCFD2-201ENST00000388940 USP31Q70CQ4 1352 aa18.91■□□□□ 0.62
SCFD2-201ENST00000388940 TSPYL6Q8N831 410 aa18.9■□□□□ 0.62
SCFD2-201ENST00000388940 ZBTB7BO15156 539 aaPredicted RBP18.9■□□□□ 0.62
SCFD2-201ENST00000388940 RGPD1P0DJD0 1748 aa18.9■□□□□ 0.62
SCFD2-201ENST00000388940 SSH2Q76I76 1423 aa18.9■□□□□ 0.62
SCFD2-201ENST00000388940 EID1Q9Y6B2 187 aa18.89■□□□□ 0.61
SCFD2-201ENST00000388940 NUCB1Q02818 461 aa18.89■□□□□ 0.61
SCFD2-201ENST00000388940 EIF4A2Q14240 407 aaKnown RBP18.89■□□□□ 0.61
SCFD2-201ENST00000388940 TWISTNBQ3B726 338 aaPredicted RBP18.89■□□□□ 0.61
SCFD2-201ENST00000388940 ABCC4O15439 1325 aa18.89■□□□□ 0.61
SCFD2-201ENST00000388940 ANO8Q9HCE9 1232 aaPredicted RBP18.88■□□□□ 0.61
SCFD2-201ENST00000388940 PEAK1Q9H792 1746 aa18.88■□□□□ 0.61
SCFD2-201ENST00000388940 TBX22Q9Y458 520 aa18.88■□□□□ 0.61
SCFD2-201ENST00000388940 KIF24Q5T7B8 1368 aa18.87■□□□□ 0.61
SCFD2-201ENST00000388940 DIP2AQ14689 1571 aa18.86■□□□□ 0.61
SCFD2-201ENST00000388940 API5Q9BZZ5 524 aaKnown RBP18.86■□□□□ 0.61
SCFD2-201ENST00000388940 TTC21AQ8NDW8 1320 aa18.86■□□□□ 0.61
SCFD2-201ENST00000388940 C8orf58Q8NAV2 365 aa18.85■□□□□ 0.61
SCFD2-201ENST00000388940 GCC1Q96CN9 775 aa18.85■□□□□ 0.61
SCFD2-201ENST00000388940 RIMS1Q86UR5 1692 aaKnown RBP18.85■□□□□ 0.61
SCFD2-201ENST00000388940 FAM83GA6ND36 823 aa18.84■□□□□ 0.61
SCFD2-201ENST00000388940 HAP1P54257 671 aaPredicted RBP18.84■□□□□ 0.61
SCFD2-201ENST00000388940 SULT6B1Q6IMI4 303 aa18.84■□□□□ 0.61
SCFD2-201ENST00000388940 SLC26A8Q96RN1 970 aa18.84■□□□□ 0.61
SCFD2-201ENST00000388940 AMOTL2Q9Y2J4 779 aa18.84■□□□□ 0.61
SCFD2-201ENST00000388940 FMN2Q9NZ56 1722 aa18.83■□□□□ 0.61
SCFD2-201ENST00000388940 CEBPAP49715 358 aaPredicted RBP18.83■□□□□ 0.6
SCFD2-201ENST00000388940 CHD1LQ86WJ1 897 aa18.83■□□□□ 0.6
SCFD2-201ENST00000388940 AEBP1Q8IUX7 1158 aa18.82■□□□□ 0.6
SCFD2-201ENST00000388940 KIAA0232Q92628 1395 aa18.82■□□□□ 0.6
SCFD2-201ENST00000388940 FER1L4A9Z1Z3 1794 aa18.82■□□□□ 0.6
SCFD2-201ENST00000388940 ELL2O00472 640 aaPredicted RBP18.82■□□□□ 0.6
SCFD2-201ENST00000388940 CHL1O00533 1208 aa18.82■□□□□ 0.6
SCFD2-201ENST00000388940 ARHGEF10O15013 1369 aa18.81■□□□□ 0.6
SCFD2-201ENST00000388940 DCTN1Q14203 1278 aa18.81■□□□□ 0.6
SCFD2-201ENST00000388940 C22orf23Q9BZE7 217 aa18.8■□□□□ 0.6
SCFD2-201ENST00000388940 RGPD8O14715 1765 aaPredicted RBP18.8■□□□□ 0.6
SCFD2-201ENST00000388940 XRN1Q8IZH2 1706 aaKnown RBP18.8■□□□□ 0.6
SCFD2-201ENST00000388940 HSP90AB2PQ58FF8 381 aa18.8■□□□□ 0.6
SCFD2-201ENST00000388940 THEMISQ8N1K5 641 aaPredicted RBP18.79■□□□□ 0.6
SCFD2-201ENST00000388940 UBE2Q2Q8WVN8 375 aa18.79■□□□□ 0.6
SCFD2-201ENST00000388940 TBC1D2Q9BYX2 928 aa18.79■□□□□ 0.6
SCFD2-201ENST00000388940 NUTM2FA1L443 756 aa18.78■□□□□ 0.6
SCFD2-201ENST00000388940 GSE1Q14687 1217 aa18.78■□□□□ 0.6
SCFD2-201ENST00000388940 LNPKQ9C0E8 428 aa18.78■□□□□ 0.6
SCFD2-201ENST00000388940 ANTXR1Q9H6X2 564 aa18.78■□□□□ 0.6
SCFD2-201ENST00000388940 SBNO1A3KN83 1393 aa18.78■□□□□ 0.6
SCFD2-201ENST00000388940 FRAT2O75474 233 aaPredicted RBP18.77■□□□□ 0.6
SCFD2-201ENST00000388940 BMP2KLQ5H9B9 411 aa18.77■□□□□ 0.6
SCFD2-201ENST00000388940 INTS3Q68E01 1043 aaKnown RBP18.77■□□□□ 0.6
SCFD2-201ENST00000388940 SIRT2Q8IXJ6 389 aa18.77■□□□□ 0.6
SCFD2-201ENST00000388940 FLT4P35916 1363 aa18.77■□□□□ 0.59
SCFD2-201ENST00000388940 CRB1P82279 1406 aa18.77■□□□□ 0.59
SCFD2-201ENST00000388940 ANKARQ7Z5J8 1434 aa18.77■□□□□ 0.59
SCFD2-201ENST00000388940 MAP3K19Q56UN5 1328 aa18.76■□□□□ 0.59
SCFD2-201ENST00000388940 KDRP35968 1356 aa18.76■□□□□ 0.59
SCFD2-201ENST00000388940 USP54Q70EL1 1684 aa18.76■□□□□ 0.59
SCFD2-201ENST00000388940 MFAP1P55081 439 aaKnown RBP18.76■□□□□ 0.59
SCFD2-201ENST00000388940 PIK3C2AO00443 1686 aa18.75■□□□□ 0.59
SCFD2-201ENST00000388940 ANKRD45Q5TZF3 282 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms