RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 POLKQ9UBT6 870 aa23.07■■□□□ 1.28
CSPG5-202ENST00000383738 IGHDP01880 384 aa23.07■■□□□ 1.28
CSPG5-202ENST00000383738 TTC21BQ7Z4L5 1316 aa23.07■■□□□ 1.28
CSPG5-202ENST00000383738 UHRF1BP1Q6BDS2 1440 aa23.06■■□□□ 1.28
CSPG5-202ENST00000383738 UGGT1Q9NYU2 1555 aa23.06■■□□□ 1.28
CSPG5-202ENST00000383738 UBTFL1P0CB47 393 aaPredicted RBP23.06■■□□□ 1.28
CSPG5-202ENST00000383738 DUSP27Q5VZP5 1158 aa23.06■■□□□ 1.28
CSPG5-202ENST00000383738 LRRC59Q96AG4 307 aaKnown RBP23.06■■□□□ 1.28
CSPG5-202ENST00000383738 TSPOAP1O95153 1857 aa23.06■■□□□ 1.28
CSPG5-202ENST00000383738 MCCP23508 829 aa23.06■■□□□ 1.28
CSPG5-202ENST00000383738 CABP4P57796 275 aa23.06■■□□□ 1.28
CSPG5-202ENST00000383738 TBC1D2Q9BYX2 928 aa23.06■■□□□ 1.28
CSPG5-202ENST00000383738 TMEM57Q8N5G2 664 aa23.06■■□□□ 1.28
CSPG5-202ENST00000383738 XRCC6P12956 609 aaKnown RBP eCLIP23.05■■□□□ 1.28
CSPG5-202ENST00000383738 CHAF1AQ13111 956 aaPredicted RBP23.05■■□□□ 1.28
CSPG5-202ENST00000383738 SURF6O75683 361 aaKnown RBP23.05■■□□□ 1.28
CSPG5-202ENST00000383738 CCDC30Q5VVM6 783 aa23.05■■□□□ 1.28
CSPG5-202ENST00000383738 DDX58O95786 925 aaKnown RBP23.04■■□□□ 1.28
CSPG5-202ENST00000383738 PRDM10Q9NQV6 1147 aa23.04■■□□□ 1.28
CSPG5-202ENST00000383738 BTBD11A6QL63 1104 aa23.04■■□□□ 1.28
CSPG5-202ENST00000383738 PHACTR3Q96KR7 559 aa23.04■■□□□ 1.28
CSPG5-202ENST00000383738 KRT24Q2M2I5 525 aa23.03■■□□□ 1.28
CSPG5-202ENST00000383738 SAMD9LQ8IVG5 1584 aa23.03■■□□□ 1.28
CSPG5-202ENST00000383738 NEUROD6Q96NK8 337 aa23.03■■□□□ 1.28
CSPG5-202ENST00000383738 SIL1Q9H173 461 aa23.03■■□□□ 1.28
CSPG5-202ENST00000383738 TNNQ9UQP3 1299 aa23.03■■□□□ 1.28
CSPG5-202ENST00000383738 RARSP54136 660 aaKnown RBP23.03■■□□□ 1.28
CSPG5-202ENST00000383738 C8orf34Q49A92 452 aa23.02■■□□□ 1.28
CSPG5-202ENST00000383738 SPINK5Q9NQ38 1064 aaPredicted RBP23.02■■□□□ 1.28
CSPG5-202ENST00000383738 TOMM22Q9NS69 142 aa23.02■■□□□ 1.28
CSPG5-202ENST00000383738 PPIP5K1Q6PFW1 1433 aa23.02■■□□□ 1.27
CSPG5-202ENST00000383738 GNAT3A8MTJ3 354 aa23.01■■□□□ 1.27
CSPG5-202ENST00000383738 ATP10AO60312 1499 aa23.01■■□□□ 1.27
CSPG5-202ENST00000383738 A0A1W2PP64 1363 aa23■■□□□ 1.27
CSPG5-202ENST00000383738 PODXL2Q9NZ53 605 aa23■■□□□ 1.27
CSPG5-202ENST00000383738 RRP9O43818 475 aaKnown RBP22.99■■□□□ 1.27
CSPG5-202ENST00000383738 PLEKHH1Q9ULM0 1364 aa22.99■■□□□ 1.27
CSPG5-202ENST00000383738 KCNH5Q8NCM2 988 aa22.99■■□□□ 1.27
CSPG5-202ENST00000383738 IFIT2P09913 472 aaKnown RBP22.98■■□□□ 1.27
CSPG5-202ENST00000383738 G3BP1Q13283 466 aaKnown RBP eCLIP22.98■■□□□ 1.27
CSPG5-202ENST00000383738 GPATCH3Q96I76 525 aa22.98■■□□□ 1.27
CSPG5-202ENST00000383738 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.98■■□□□ 1.27
CSPG5-202ENST00000383738 PDE3AQ14432 1141 aa22.98■■□□□ 1.27
CSPG5-202ENST00000383738 ANO2Q9NQ90 1003 aa22.98■■□□□ 1.27
CSPG5-202ENST00000383738 HDAC5Q9UQL6 1122 aa22.98■■□□□ 1.27
CSPG5-202ENST00000383738 YTHDC2Q9H6S0 1430 aaKnown RBP22.97■■□□□ 1.27
CSPG5-202ENST00000383738 PIP4K2AP48426 406 aaPredicted RBP22.97■■□□□ 1.27
CSPG5-202ENST00000383738 SKOR2Q2VWA4 1001 aaPredicted RBP22.97■■□□□ 1.27
CSPG5-202ENST00000383738 IL1RAPL2Q9NP60 686 aa22.97■■□□□ 1.27
CSPG5-202ENST00000383738 DMRT2Q9Y5R5 561 aa22.96■■□□□ 1.27
CSPG5-202ENST00000383738 MVPQ14764 893 aaKnown RBP22.96■■□□□ 1.27
CSPG5-202ENST00000383738 EIF4A2Q14240 407 aaKnown RBP22.96■■□□□ 1.27
CSPG5-202ENST00000383738 ANKRD36BQ8N2N9 1353 aa22.95■■□□□ 1.27
CSPG5-202ENST00000383738 GOLGA6L4A6NEF3 574 aa22.95■■□□□ 1.26
CSPG5-202ENST00000383738 MAP4K4O95819 1239 aaPredicted RBP22.95■■□□□ 1.26
CSPG5-202ENST00000383738 JARID2Q92833 1246 aaPredicted RBP22.95■■□□□ 1.26
CSPG5-202ENST00000383738 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.94■■□□□ 1.26
CSPG5-202ENST00000383738 EXOC6BQ9Y2D4 811 aa22.94■■□□□ 1.26
CSPG5-202ENST00000383738 PRPF40AO75400 957 aaKnown RBP22.94■■□□□ 1.26
CSPG5-202ENST00000383738 SPG7Q9UQ90 795 aa22.94■■□□□ 1.26
CSPG5-202ENST00000383738 CADPS2Q86UW7 1296 aa22.93■■□□□ 1.26
CSPG5-202ENST00000383738 ANKRD24Q8TF21 1146 aa22.93■■□□□ 1.26
CSPG5-202ENST00000383738 MAPK8IP2Q13387 824 aaPredicted RBP22.93■■□□□ 1.26
CSPG5-202ENST00000383738 SLC39A6Q13433 755 aa22.93■■□□□ 1.26
CSPG5-202ENST00000383738 MBIPQ9NS73 344 aa22.93■■□□□ 1.26
CSPG5-202ENST00000383738 DIAPH3Q9NSV4 1193 aa22.92■■□□□ 1.26
CSPG5-202ENST00000383738 PARD3Q8TEW0 1356 aa22.91■■□□□ 1.26
CSPG5-202ENST00000383738 ZCCHC11Q5TAX3 1644 aaKnown RBP22.91■■□□□ 1.26
CSPG5-202ENST00000383738 TRIM27P14373 513 aa22.91■■□□□ 1.26
CSPG5-202ENST00000383738 TSPYL6Q8N831 410 aa22.9■■□□□ 1.26
CSPG5-202ENST00000383738 TBX22Q9Y458 520 aa22.9■■□□□ 1.26
CSPG5-202ENST00000383738 KLHL34Q8N239 644 aa22.9■■□□□ 1.26
CSPG5-202ENST00000383738 MAP3K19Q56UN5 1328 aa22.89■■□□□ 1.26
CSPG5-202ENST00000383738 PTMSP20962 102 aa22.89■■□□□ 1.26
CSPG5-202ENST00000383738 SMARCA5O60264 1052 aaPredicted RBP22.89■■□□□ 1.25
CSPG5-202ENST00000383738 HSP90B1P14625 803 aaKnown RBP22.89■■□□□ 1.25
CSPG5-202ENST00000383738 SRCIN1Q9C0H9 1055 aa22.89■■□□□ 1.25
CSPG5-202ENST00000383738 ST18O60284 1047 aa22.88■■□□□ 1.25
CSPG5-202ENST00000383738 MAST1Q9Y2H9 1570 aa22.88■■□□□ 1.25
CSPG5-202ENST00000383738 MYO5CQ9NQX4 1742 aa22.88■■□□□ 1.25
CSPG5-202ENST00000383738 TAF7Q15545 349 aaPredicted RBP22.88■■□□□ 1.25
CSPG5-202ENST00000383738 ZHX1Q9UKY1 873 aaPredicted RBP22.88■■□□□ 1.25
CSPG5-202ENST00000383738 NGLY1Q96IV0 654 aa22.88■■□□□ 1.25
CSPG5-202ENST00000383738 G3V3G9 751 aa22.87■■□□□ 1.25
CSPG5-202ENST00000383738 DCAF8Q5TAQ9 597 aa22.87■■□□□ 1.25
CSPG5-202ENST00000383738 BICDL1Q6ZP65 573 aa22.87■■□□□ 1.25
CSPG5-202ENST00000383738 C8orf58Q8NAV2 365 aa22.87■■□□□ 1.25
CSPG5-202ENST00000383738 GNAI3P08754 354 aa22.87■■□□□ 1.25
CSPG5-202ENST00000383738 SRGAP3O43295 1099 aa22.87■■□□□ 1.25
CSPG5-202ENST00000383738 GNAI2P04899 355 aa22.87■■□□□ 1.25
CSPG5-202ENST00000383738 PLA2R1Q13018 1463 aa22.87■■□□□ 1.25
CSPG5-202ENST00000383738 EYA1Q99502 592 aa22.86■■□□□ 1.25
CSPG5-202ENST00000383738 GCP02774 474 aa22.86■■□□□ 1.25
CSPG5-202ENST00000383738 C19orf44Q9H6X5 657 aa22.86■■□□□ 1.25
CSPG5-202ENST00000383738 UQCRHLA0A096LP55 91 aa22.86■■□□□ 1.25
CSPG5-202ENST00000383738 UQCRHP07919 91 aa22.86■■□□□ 1.25
CSPG5-202ENST00000383738 PHF23Q9BUL5 403 aaPredicted RBP22.85■■□□□ 1.25
CSPG5-202ENST00000383738 APPP05067 770 aa22.85■■□□□ 1.25
CSPG5-202ENST00000383738 METP08581 1390 aa22.85■■□□□ 1.25
CSPG5-202ENST00000383738 TPM2P07951 284 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms