RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 POTEJP0CG39 1038 aa6.91□□□□□ -1.3
RFX3-204ENST00000382004 RNF187Q5TA31 235 aaPredicted RBP6.91□□□□□ -1.3
RFX3-204ENST00000382004 RBM42Q9BTD8 480 aaKnown RBP6.91□□□□□ -1.3
RFX3-204ENST00000382004 HIP1O00291 1037 aa6.9□□□□□ -1.3
RFX3-204ENST00000382004 CCDC158Q5M9N0 1113 aa6.9□□□□□ -1.3
RFX3-204ENST00000382004 RUNDC1Q96C34 613 aa6.9□□□□□ -1.3
RFX3-204ENST00000382004 GSTTP1A0A1W2PQM5 241 aa6.9□□□□□ -1.3
RFX3-204ENST00000382004 GNL3LQ9NVN8 582 aaKnown RBP6.9□□□□□ -1.3
RFX3-204ENST00000382004 SMC1AQ14683 1233 aaKnown RBP6.9□□□□□ -1.3
RFX3-204ENST00000382004 RSPH4AQ5TD94 716 aa6.9□□□□□ -1.3
RFX3-204ENST00000382004 GPATCH11Q8N954 259 aa6.9□□□□□ -1.3
RFX3-204ENST00000382004 CTNNBL1Q8WYA6 563 aaPredicted RBP6.9□□□□□ -1.3
RFX3-204ENST00000382004 WDR70Q9NW82 654 aa6.9□□□□□ -1.3
RFX3-204ENST00000382004 NOL7Q9UMY1 257 aaKnown RBP6.9□□□□□ -1.3
RFX3-204ENST00000382004 ZBED9Q6R2W3 1325 aa6.9□□□□□ -1.3
RFX3-204ENST00000382004 CETN2P41208 172 aa6.9□□□□□ -1.3
RFX3-204ENST00000382004 AEBP2Q6ZN18 517 aaPredicted RBP6.9□□□□□ -1.3
RFX3-204ENST00000382004 ZSCAN29Q8IWY8 852 aaPredicted RBP6.9□□□□□ -1.3
RFX3-204ENST00000382004 FILIP1Q7Z7B0 1213 aa6.9□□□□□ -1.3
RFX3-204ENST00000382004 USP5P45974 858 aa6.9□□□□□ -1.31
RFX3-204ENST00000382004 IFFO1Q0D2I5 559 aa6.9□□□□□ -1.31
RFX3-204ENST00000382004 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.9□□□□□ -1.31
RFX3-204ENST00000382004 CARMIL2Q6F5E8 1435 aa6.9□□□□□ -1.31
RFX3-204ENST00000382004 SPDYE4A6NLX3 237 aa6.9□□□□□ -1.31
RFX3-204ENST00000382004 DHX8Q14562 1220 aaKnown RBP6.9□□□□□ -1.31
RFX3-204ENST00000382004 KANK4Q5T7N3 995 aaPredicted RBP6.9□□□□□ -1.31
RFX3-204ENST00000382004 IPO4Q8TEX9 1081 aaKnown RBP6.9□□□□□ -1.31
RFX3-204ENST00000382004 FMN1Q68DA7 1419 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 DNA2P51530 1060 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 CCDC178Q5BJE1 867 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 CEP57L1Q8IYX8 460 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 ZNF397Q8NF99 534 aaPredicted RBP6.89□□□□□ -1.31
RFX3-204ENST00000382004 C1orf115Q9H7X2 142 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 CCDC57Q2TAC2 916 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 ARHGAP29Q52LW3 1261 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 SIL1Q9H173 461 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 CYP46A1Q9Y6A2 500 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 MCM2P49736 904 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 SPATA24Q86W54 205 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 CUX2O14529 1486 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 PRDM10Q9NQV6 1147 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 MACROD2A1Z1Q3 448 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 ATF3P18847 181 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 SCLT1Q96NL6 688 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 NACAP1Q9BZK3 213 aa6.89□□□□□ -1.31
RFX3-204ENST00000382004 VGFO15240 615 aaPredicted RBP6.88□□□□□ -1.31
RFX3-204ENST00000382004 KRT85P78386 507 aa6.88□□□□□ -1.31
RFX3-204ENST00000382004 TRERF1Q96PN7 1200 aa6.88□□□□□ -1.31
RFX3-204ENST00000382004 CCDC144AA2RUR9 1427 aa6.88□□□□□ -1.31
RFX3-204ENST00000382004 TNNT1P13805 278 aa6.88□□□□□ -1.31
RFX3-204ENST00000382004 HOOK3Q86VS8 718 aa6.88□□□□□ -1.31
RFX3-204ENST00000382004 UBXN4Q92575 508 aa6.88□□□□□ -1.31
RFX3-204ENST00000382004 LARP1BQ659C4 914 aaKnown RBP6.88□□□□□ -1.31
RFX3-204ENST00000382004 TMCO5BA8MYB1 307 aa6.88□□□□□ -1.31
RFX3-204ENST00000382004 UACAQ9BZF9 1416 aa6.88□□□□□ -1.31
RFX3-204ENST00000382004 IL27Q8NEV9 243 aa6.88□□□□□ -1.31
RFX3-204ENST00000382004 MYCNP04198 464 aaPredicted RBP6.88□□□□□ -1.31
RFX3-204ENST00000382004 CCDC30Q5VVM6 783 aa6.88□□□□□ -1.31
RFX3-204ENST00000382004 UPF3BQ9BZI7 483 aaKnown RBP6.88□□□□□ -1.31
RFX3-204ENST00000382004 LARP1Q6PKG0 1096 aaKnown RBP6.88□□□□□ -1.31
RFX3-204ENST00000382004 TMEM87AQ8NBN3 555 aa6.88□□□□□ -1.31
RFX3-204ENST00000382004 RAI14Q9P0K7 980 aa6.88□□□□□ -1.31
RFX3-204ENST00000382004 CASQ1P31415 396 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 ANKRD1Q15327 319 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 SPA17Q15506 151 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 CFAP100Q494V2 611 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 LUZP1Q86V48 1076 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 TMX1Q9H3N1 280 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 PDCL2Q8N4E4 241 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 SPATA32Q96LK8 384 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 FKBP4Q02790 459 aaKnown RBP eCLIP6.87□□□□□ -1.31
RFX3-204ENST00000382004 DNAI2Q9GZS0 605 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 SPINK5Q9NQ38 1064 aaPredicted RBP6.87□□□□□ -1.31
RFX3-204ENST00000382004 POLR3GO15318 223 aaPredicted RBP6.87□□□□□ -1.31
RFX3-204ENST00000382004 GCOM1H8Y6P7 765 aaPredicted RBP6.87□□□□□ -1.31
RFX3-204ENST00000382004 MYZAPP0CAP1 466 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 UBA5Q9GZZ9 404 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 GNAI3P08754 354 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 TDO2P48775 406 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 BMS1Q14692 1282 aaKnown RBP6.87□□□□□ -1.31
RFX3-204ENST00000382004 ANKRD18BA2A2Z9 1011 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 PPP1R12BO60237 982 aaPredicted RBP6.87□□□□□ -1.31
RFX3-204ENST00000382004 CBX1P83916 185 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 CFAP57Q96MR6 1250 aa6.87□□□□□ -1.31
RFX3-204ENST00000382004 WDR33Q9C0J8 1336 aaKnown RBP6.87□□□□□ -1.31
RFX3-204ENST00000382004 SMTNL1A8MU46 457 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 IMMTQ16891 758 aaKnown RBP6.86□□□□□ -1.31
RFX3-204ENST00000382004 MAP9Q49MG5 647 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 PRKRIP1Q9H875 184 aaPredicted RBP6.86□□□□□ -1.31
RFX3-204ENST00000382004 CTNNA2P26232 953 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 GRPEL1Q9HAV7 217 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 HOMER2Q9NSB8 354 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 UBAC1Q9BSL1 405 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 NUP62CLQ9H1M0 184 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 DDX11Q96FC9 970 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 GBP3Q9H0R5 595 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 CCDC175P0C221 793 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 SPECC1Q5M775 1068 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 KLHL10Q6JEL2 608 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 CACNA2D4Q7Z3S7 1137 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms