RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 TRAPPC8Q9Y2L5 1435 aa16.79■□□□□ 0.28
SNPH-201ENST00000381867 NUTM2GQ5VZR2 741 aa16.79■□□□□ 0.28
SNPH-201ENST00000381867 TCP11L2Q8N4U5 519 aa16.79■□□□□ 0.28
SNPH-201ENST00000381867 ERCC4Q92889 916 aaPredicted RBP16.79■□□□□ 0.28
SNPH-201ENST00000381867 ADAMTS8Q9UP79 889 aa16.78■□□□□ 0.28
SNPH-201ENST00000381867 SPG7Q9UQ90 795 aa16.78■□□□□ 0.28
SNPH-201ENST00000381867 CFAP74Q9C0B2 1584 aa16.78■□□□□ 0.28
SNPH-201ENST00000381867 IL27Q8NEV9 243 aa16.78■□□□□ 0.28
SNPH-201ENST00000381867 TSPY26PQ9H489 355 aa16.78■□□□□ 0.28
SNPH-201ENST00000381867 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.78■□□□□ 0.28
SNPH-201ENST00000381867 FKBP5Q13451 457 aaPredicted RBP16.78■□□□□ 0.28
SNPH-201ENST00000381867 NSD3Q9BZ95 1437 aa16.78■□□□□ 0.28
SNPH-201ENST00000381867 ERC2O15083 957 aa16.77■□□□□ 0.28
SNPH-201ENST00000381867 PRKAR2BP31323 418 aa16.77■□□□□ 0.28
SNPH-201ENST00000381867 PANK1Q8TE04 598 aa16.77■□□□□ 0.28
SNPH-201ENST00000381867 CCDC30Q5VVM6 783 aa16.77■□□□□ 0.28
SNPH-201ENST00000381867 FBXO31Q5XUX0 539 aaPredicted RBP16.77■□□□□ 0.27
SNPH-201ENST00000381867 DNMT1P26358 1616 aaKnown RBP16.77■□□□□ 0.27
SNPH-201ENST00000381867 NEO1Q92859 1461 aa16.77■□□□□ 0.27
SNPH-201ENST00000381867 WWC1Q8IX03 1113 aa16.77■□□□□ 0.27
SNPH-201ENST00000381867 TCEAL9Q9UHQ7 104 aa16.77■□□□□ 0.27
SNPH-201ENST00000381867 G3BP1Q13283 466 aaKnown RBP eCLIP16.76■□□□□ 0.27
SNPH-201ENST00000381867 OLFM4Q6UX06 510 aa16.76■□□□□ 0.27
SNPH-201ENST00000381867 ANO8Q9HCE9 1232 aaPredicted RBP16.76■□□□□ 0.27
SNPH-201ENST00000381867 WDR63Q8IWG1 891 aa16.76■□□□□ 0.27
SNPH-201ENST00000381867 EIF2AK4Q9P2K8 1649 aaKnown RBP16.75■□□□□ 0.27
SNPH-201ENST00000381867 TRIM5Q9C035 493 aa16.75■□□□□ 0.27
SNPH-201ENST00000381867 ADGRF5Q8IZF2 1346 aa16.75■□□□□ 0.27
SNPH-201ENST00000381867 APPP05067 770 aa16.75■□□□□ 0.27
SNPH-201ENST00000381867 SAFBQ15424 915 aaKnown RBP eCLIP16.75■□□□□ 0.27
SNPH-201ENST00000381867 AMOTL2Q9Y2J4 779 aa16.75■□□□□ 0.27
SNPH-201ENST00000381867 H0YHG0 523 aa16.75■□□□□ 0.27
SNPH-201ENST00000381867 WASLO00401 505 aaPredicted RBP16.75■□□□□ 0.27
SNPH-201ENST00000381867 NFXL1Q6ZNB6 911 aa16.74■□□□□ 0.27
SNPH-201ENST00000381867 FCHSD2O94868 740 aa16.74■□□□□ 0.27
SNPH-201ENST00000381867 ADGRL2O95490 1459 aa16.74■□□□□ 0.27
SNPH-201ENST00000381867 CCP110O43303 1012 aa16.74■□□□□ 0.27
SNPH-201ENST00000381867 NAP1L1P55209 391 aaKnown RBP16.74■□□□□ 0.27
SNPH-201ENST00000381867 DCTN1Q14203 1278 aa16.73■□□□□ 0.27
SNPH-201ENST00000381867 RBM10P98175 930 aaKnown RBP16.73■□□□□ 0.27
SNPH-201ENST00000381867 ZNF428Q96B54 188 aa16.73■□□□□ 0.27
SNPH-201ENST00000381867 BCL11BQ9C0K0 894 aaPredicted RBP16.73■□□□□ 0.27
SNPH-201ENST00000381867 DHX16O60231 1041 aaKnown RBP16.73■□□□□ 0.27
SNPH-201ENST00000381867 PDILTQ8N807 584 aa16.73■□□□□ 0.27
SNPH-201ENST00000381867 RBM33Q96EV2 1170 aaKnown RBP16.73■□□□□ 0.27
SNPH-201ENST00000381867 SDF4Q9BRK5 362 aa16.73■□□□□ 0.27
SNPH-201ENST00000381867 FOSBP53539 338 aa16.72■□□□□ 0.27
SNPH-201ENST00000381867 MCM2P49736 904 aa16.72■□□□□ 0.27
SNPH-201ENST00000381867 PRDM11Q9NQV5 511 aa16.72■□□□□ 0.27
SNPH-201ENST00000381867 CCDC191Q8NCU4 936 aa16.72■□□□□ 0.27
SNPH-201ENST00000381867 ERICH2A1L162 156 aa16.71■□□□□ 0.27
SNPH-201ENST00000381867 PRPF40AO75400 957 aaKnown RBP16.71■□□□□ 0.27
SNPH-201ENST00000381867 RDXP35241 583 aaKnown RBP16.71■□□□□ 0.27
SNPH-201ENST00000381867 RABEP1Q15276 862 aa16.71■□□□□ 0.27
SNPH-201ENST00000381867 CAGE1Q8TC20 777 aa16.71■□□□□ 0.27
SNPH-201ENST00000381867 RALGAPBQ86X10 1494 aa16.71■□□□□ 0.27
SNPH-201ENST00000381867 PSMA5P28066 241 aa16.71■□□□□ 0.27
SNPH-201ENST00000381867 CWC22Q9HCG8 908 aaKnown RBP16.71■□□□□ 0.27
SNPH-201ENST00000381867 ATP10AO60312 1499 aa16.71■□□□□ 0.27
SNPH-201ENST00000381867 PTPRKQ15262 1439 aa16.71■□□□□ 0.27
SNPH-201ENST00000381867 GNAI3P08754 354 aa16.71■□□□□ 0.27
SNPH-201ENST00000381867 PHF8Q9UPP1 1060 aa16.71■□□□□ 0.27
SNPH-201ENST00000381867 RIC3Q7Z5B4 369 aa16.7■□□□□ 0.26
SNPH-201ENST00000381867 LEKR1Q6ZMV7 388 aa16.7■□□□□ 0.26
SNPH-201ENST00000381867 ATP7AQ04656 1500 aa16.7■□□□□ 0.26
SNPH-201ENST00000381867 DCAF8L1A6NGE4 600 aa16.7■□□□□ 0.26
SNPH-201ENST00000381867 SULT6B1Q6IMI4 303 aa16.7■□□□□ 0.26
SNPH-201ENST00000381867 TOM1L2Q6ZVM7 507 aa16.7■□□□□ 0.26
SNPH-201ENST00000381867 PUS7Q96PZ0 661 aaKnown RBP16.69■□□□□ 0.26
SNPH-201ENST00000381867 RIMS2Q9UQ26 1411 aa16.69■□□□□ 0.26
SNPH-201ENST00000381867 RALYLQ86SE5 291 aaKnown RBP16.69■□□□□ 0.26
SNPH-201ENST00000381867 PDZRN3Q9UPQ7 1066 aa16.68■□□□□ 0.26
SNPH-201ENST00000381867 ARHGEF12Q9NZN5 1544 aa16.68■□□□□ 0.26
SNPH-201ENST00000381867 KINO60870 393 aaKnown RBP16.68■□□□□ 0.26
SNPH-201ENST00000381867 ZNF530Q6P9A1 599 aaPredicted RBP16.68■□□□□ 0.26
SNPH-201ENST00000381867 GRPEL1Q9HAV7 217 aa16.68■□□□□ 0.26
SNPH-201ENST00000381867 SMC2O95347 1197 aa16.68■□□□□ 0.26
SNPH-201ENST00000381867 ABCC11Q96J66 1382 aa16.68■□□□□ 0.26
SNPH-201ENST00000381867 CEBPAP49715 358 aaPredicted RBP16.67■□□□□ 0.26
SNPH-201ENST00000381867 WAPLQ7Z5K2 1190 aa16.67■□□□□ 0.26
SNPH-201ENST00000381867 BACH2Q9BYV9 841 aa16.67■□□□□ 0.26
SNPH-201ENST00000381867 AIMP1Q12904 312 aaKnown RBP16.67■□□□□ 0.26
SNPH-201ENST00000381867 CCDC27Q2M243 656 aa16.67■□□□□ 0.26
SNPH-201ENST00000381867 CADPS2Q86UW7 1296 aa16.67■□□□□ 0.26
SNPH-201ENST00000381867 PDCP20941 246 aa16.67■□□□□ 0.26
SNPH-201ENST00000381867 CNTROBQ8N137 903 aa16.67■□□□□ 0.26
SNPH-201ENST00000381867 RRP9O43818 475 aaKnown RBP16.67■□□□□ 0.26
SNPH-201ENST00000381867 DHX8Q14562 1220 aaKnown RBP16.66■□□□□ 0.26
SNPH-201ENST00000381867 NEK4P51957 841 aa16.66■□□□□ 0.26
SNPH-201ENST00000381867 KIF6Q6ZMV9 814 aa16.66■□□□□ 0.26
SNPH-201ENST00000381867 UBTFL1P0CB47 393 aaPredicted RBP16.66■□□□□ 0.26
SNPH-201ENST00000381867 SAMD1Q6SPF0 538 aaPredicted RBP16.66■□□□□ 0.26
SNPH-201ENST00000381867 STRN4Q9NRL3 753 aa16.66■□□□□ 0.26
SNPH-201ENST00000381867 MAPKBP1O60336 1514 aa16.66■□□□□ 0.26
SNPH-201ENST00000381867 PDE3AQ14432 1141 aa16.65■□□□□ 0.26
SNPH-201ENST00000381867 TWISTNBQ3B726 338 aaPredicted RBP16.65■□□□□ 0.26
SNPH-201ENST00000381867 CABP4P57796 275 aa16.65■□□□□ 0.26
SNPH-201ENST00000381867 SMARCE1Q969G3 411 aa16.65■□□□□ 0.26
SNPH-201ENST00000381867 ABCA8O94911 1581 aa16.65■□□□□ 0.26
SNPH-201ENST00000381867 ARHGEF5Q12774 1597 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms