RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 C8orf58Q8NAV2 365 aa10.9□□□□□ -0.66
TRIM6-203ENST00000380107 GRPEL1Q9HAV7 217 aa10.9□□□□□ -0.66
TRIM6-203ENST00000380107 YTHDC2Q9H6S0 1430 aaKnown RBP10.9□□□□□ -0.66
TRIM6-203ENST00000380107 KRT24Q2M2I5 525 aa10.9□□□□□ -0.66
TRIM6-203ENST00000380107 ALDH1L2Q3SY69 923 aa10.9□□□□□ -0.66
TRIM6-203ENST00000380107 NME9Q86XW9 330 aa10.9□□□□□ -0.66
TRIM6-203ENST00000380107 C16orf71Q8IYS4 520 aaPredicted RBP10.9□□□□□ -0.66
TRIM6-203ENST00000380107 NAP1L5Q96NT1 182 aaPredicted RBP10.9□□□□□ -0.66
TRIM6-203ENST00000380107 MAP2P11137 1827 aaKnown RBP10.9□□□□□ -0.67
TRIM6-203ENST00000380107 BMP2KLQ5H9B9 411 aa10.89□□□□□ -0.67
TRIM6-203ENST00000380107 YEATS2Q9ULM3 1422 aa10.89□□□□□ -0.67
TRIM6-203ENST00000380107 DDX11L8A8MPP1 907 aa10.89□□□□□ -0.67
TRIM6-203ENST00000380107 SSFA2P28290 1259 aa10.89□□□□□ -0.67
TRIM6-203ENST00000380107 NFE2L2Q16236 605 aa10.89□□□□□ -0.67
TRIM6-203ENST00000380107 GAS2L2Q8NHY3 880 aa10.89□□□□□ -0.67
TRIM6-203ENST00000380107 ERBB4Q15303 1308 aa10.88□□□□□ -0.67
TRIM6-203ENST00000380107 PNPLA6Q8IY17 1366 aa10.88□□□□□ -0.67
TRIM6-203ENST00000380107 MRE11P49959 708 aa10.88□□□□□ -0.67
TRIM6-203ENST00000380107 TWISTNBQ3B726 338 aaPredicted RBP10.88□□□□□ -0.67
TRIM6-203ENST00000380107 OTUD7AQ8TE49 926 aaPredicted RBP10.88□□□□□ -0.67
TRIM6-203ENST00000380107 FAM135BQ49AJ0 1406 aa10.88□□□□□ -0.67
TRIM6-203ENST00000380107 NCOA3Q9Y6Q9 1424 aa10.88□□□□□ -0.67
TRIM6-203ENST00000380107 GSPT1P15170 499 aaKnown RBP10.87□□□□□ -0.67
TRIM6-203ENST00000380107 SNX21Q969T3 373 aa10.87□□□□□ -0.67
TRIM6-203ENST00000380107 ANKRD26Q9UPS8 1709 aa10.87□□□□□ -0.67
TRIM6-203ENST00000380107 RAB3GAP1Q15042 981 aa10.87□□□□□ -0.67
TRIM6-203ENST00000380107 PNNQ9H307 717 aaKnown RBP10.87□□□□□ -0.67
TRIM6-203ENST00000380107 SLC52A1Q9NWF4 448 aa10.87□□□□□ -0.67
TRIM6-203ENST00000380107 K7ELQ4 463 aaPredicted RBP10.86□□□□□ -0.67
TRIM6-203ENST00000380107 CFAP74Q9C0B2 1584 aa10.86□□□□□ -0.67
TRIM6-203ENST00000380107 SMARCA5O60264 1052 aaPredicted RBP10.86□□□□□ -0.67
TRIM6-203ENST00000380107 GCC1Q96CN9 775 aa10.86□□□□□ -0.67
TRIM6-203ENST00000380107 KIF20BQ96Q89 1820 aa10.86□□□□□ -0.67
TRIM6-203ENST00000380107 MED14O60244 1454 aa10.85□□□□□ -0.67
TRIM6-203ENST00000380107 DIP2CQ9Y2E4 1556 aa10.85□□□□□ -0.67
TRIM6-203ENST00000380107 SOX12O15370 315 aa10.85□□□□□ -0.67
TRIM6-203ENST00000380107 IL13P35225 146 aa10.85□□□□□ -0.67
TRIM6-203ENST00000380107 GNAI1P63096 354 aa10.85□□□□□ -0.67
TRIM6-203ENST00000380107 AEBP1Q8IUX7 1158 aa10.85□□□□□ -0.67
TRIM6-203ENST00000380107 CHAMP1Q96JM3 812 aa10.85□□□□□ -0.67
TRIM6-203ENST00000380107 GBP4Q96PP9 640 aa10.85□□□□□ -0.67
TRIM6-203ENST00000380107 NUTM2FA1L443 756 aa10.84□□□□□ -0.67
TRIM6-203ENST00000380107 PKP1Q13835 747 aa10.84□□□□□ -0.67
TRIM6-203ENST00000380107 MLECQ14165 292 aa10.84□□□□□ -0.67
TRIM6-203ENST00000380107 PLEKHM2Q8IWE5 1019 aa10.84□□□□□ -0.67
TRIM6-203ENST00000380107 ARHGEF40Q8TER5 1519 aa10.84□□□□□ -0.67
TRIM6-203ENST00000380107 ABCC4O15439 1325 aa10.84□□□□□ -0.67
TRIM6-203ENST00000380107 TMEM131LA2VDJ0 1609 aa10.84□□□□□ -0.67
TRIM6-203ENST00000380107 DLG5Q8TDM6 1919 aa10.84□□□□□ -0.67
TRIM6-203ENST00000380107 ALKQ9UM73 1620 aa10.84□□□□□ -0.67
TRIM6-203ENST00000380107 IFT57Q9NWB7 429 aa10.83□□□□□ -0.68
TRIM6-203ENST00000380107 CDC45O75419 566 aa10.83□□□□□ -0.68
TRIM6-203ENST00000380107 ZNF853P0CG23 659 aa10.83□□□□□ -0.68
TRIM6-203ENST00000380107 CLCN1P35523 988 aa10.83□□□□□ -0.68
TRIM6-203ENST00000380107 TXNDC2Q86VQ3 553 aa10.83□□□□□ -0.68
TRIM6-203ENST00000380107 MIS18AQ9NYP9 233 aa10.83□□□□□ -0.68
TRIM6-203ENST00000380107 ZFYVE9O95405 1425 aa10.83□□□□□ -0.68
TRIM6-203ENST00000380107 PTCH1Q13635 1447 aa10.83□□□□□ -0.68
TRIM6-203ENST00000380107 KNDC1Q76NI1 1749 aa10.83□□□□□ -0.68
TRIM6-203ENST00000380107 NCLP19338 710 aaKnown RBP10.82□□□□□ -0.68
TRIM6-203ENST00000380107 MCM10Q7L590 875 aa10.82□□□□□ -0.68
TRIM6-203ENST00000380107 PREX1Q8TCU6 1659 aa10.82□□□□□ -0.68
TRIM6-203ENST00000380107 ESPNB1AK53 854 aa10.82□□□□□ -0.68
TRIM6-203ENST00000380107 FOXD4L5Q5VV16 416 aaPredicted RBP10.82□□□□□ -0.68
TRIM6-203ENST00000380107 FOXD4L4Q8WXT5 416 aaPredicted RBP10.82□□□□□ -0.68
TRIM6-203ENST00000380107 ARHGAP45Q92619 1136 aa10.82□□□□□ -0.68
TRIM6-203ENST00000380107 CFAP44Q96MT7 982 aa10.82□□□□□ -0.68
TRIM6-203ENST00000380107 BRPF1P55201 1214 aaPredicted RBP10.81□□□□□ -0.68
TRIM6-203ENST00000380107 MCTP1Q6DN14 999 aa10.81□□□□□ -0.68
TRIM6-203ENST00000380107 TRIM44Q96DX7 344 aaPredicted RBP10.81□□□□□ -0.68
TRIM6-203ENST00000380107 DDX49Q9Y6V7 483 aaKnown RBP10.81□□□□□ -0.68
TRIM6-203ENST00000380107 CLTCQ00610 1675 aaKnown RBP10.81□□□□□ -0.68
TRIM6-203ENST00000380107 CIZ1Q9ULV3 898 aaPredicted RBP10.81□□□□□ -0.68
TRIM6-203ENST00000380107 ARHGAP31Q2M1Z3 1444 aa10.81□□□□□ -0.68
TRIM6-203ENST00000380107 BAG4O95429 457 aaKnown RBP10.8□□□□□ -0.68
TRIM6-203ENST00000380107 TSHZ3Q63HK5 1081 aa10.8□□□□□ -0.68
TRIM6-203ENST00000380107 ZGPATQ8N5A5 531 aaKnown RBP10.8□□□□□ -0.68
TRIM6-203ENST00000380107 ZNF428Q96B54 188 aa10.8□□□□□ -0.68
TRIM6-203ENST00000380107 PIK3R4Q99570 1358 aa10.8□□□□□ -0.68
TRIM6-203ENST00000380107 TTC22Q5TAA0 569 aa10.8□□□□□ -0.68
TRIM6-203ENST00000380107 SULT6B1Q6IMI4 303 aa10.8□□□□□ -0.68
TRIM6-203ENST00000380107 COG3Q96JB2 828 aa10.8□□□□□ -0.68
TRIM6-203ENST00000380107 MEIS3Q99687 375 aa10.8□□□□□ -0.68
TRIM6-203ENST00000380107 RIMS2Q9UQ26 1411 aa10.8□□□□□ -0.68
TRIM6-203ENST00000380107 SDSP20132 328 aa10.79□□□□□ -0.68
TRIM6-203ENST00000380107 CALD1Q05682 793 aaKnown RBP10.79□□□□□ -0.68
TRIM6-203ENST00000380107 API5Q9BZZ5 524 aaKnown RBP10.79□□□□□ -0.68
TRIM6-203ENST00000380107 UBE2Q2Q8WVN8 375 aa10.79□□□□□ -0.68
TRIM6-203ENST00000380107 DCTPP1Q9H773 170 aa10.79□□□□□ -0.68
TRIM6-203ENST00000380107 CDC42BPGQ6DT37 1551 aa10.79□□□□□ -0.68
TRIM6-203ENST00000380107 WASLO00401 505 aaPredicted RBP10.78□□□□□ -0.68
TRIM6-203ENST00000380107 TRHP20396 242 aaPredicted RBP10.78□□□□□ -0.68
TRIM6-203ENST00000380107 CAVIN1Q6NZI2 390 aaKnown RBP10.78□□□□□ -0.68
TRIM6-203ENST00000380107 SLC4A10Q6U841 1118 aa10.78□□□□□ -0.68
TRIM6-203ENST00000380107 NUDT16Q96DE0 195 aaKnown RBP10.78□□□□□ -0.68
TRIM6-203ENST00000380107 USP26Q9BXU7 913 aa10.78□□□□□ -0.68
TRIM6-203ENST00000380107 MSH6P52701 1360 aa10.78□□□□□ -0.68
TRIM6-203ENST00000380107 CPS1P31327 1500 aa10.78□□□□□ -0.68
TRIM6-203ENST00000380107 F6X3S4 739 aa10.78□□□□□ -0.68
TRIM6-203ENST00000380107 CHMP4BQ9H444 224 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms