RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 USP54Q70EL1 1684 aa9.55□□□□□ -0.88
GPCPD1-201ENST00000379019 POLR3AO14802 1390 aaPredicted RBP9.55□□□□□ -0.88
GPCPD1-201ENST00000379019 CENPJQ9HC77 1338 aaPredicted RBP9.55□□□□□ -0.88
GPCPD1-201ENST00000379019 WASLO00401 505 aaPredicted RBP9.55□□□□□ -0.88
GPCPD1-201ENST00000379019 RBM42Q9BTD8 480 aaKnown RBP9.55□□□□□ -0.88
GPCPD1-201ENST00000379019 USP32Q8NFA0 1604 aa9.54□□□□□ -0.88
GPCPD1-201ENST00000379019 DTNBO60941 627 aa9.54□□□□□ -0.88
GPCPD1-201ENST00000379019 FAM161AQ3B820 660 aa9.54□□□□□ -0.88
GPCPD1-201ENST00000379019 RALBP1Q15311 655 aa9.54□□□□□ -0.88
GPCPD1-201ENST00000379019 TRPM3Q9HCF6 1732 aaPredicted RBP9.54□□□□□ -0.88
GPCPD1-201ENST00000379019 NWD2Q9ULI1 1742 aa9.54□□□□□ -0.88
GPCPD1-201ENST00000379019 PRAM1Q96QH2 718 aa9.54□□□□□ -0.88
GPCPD1-201ENST00000379019 EVC2Q86UK5 1308 aa9.53□□□□□ -0.88
GPCPD1-201ENST00000379019 CDCA8Q53HL2 280 aa9.53□□□□□ -0.88
GPCPD1-201ENST00000379019 PLEKHG3A1L390 1219 aa9.53□□□□□ -0.88
GPCPD1-201ENST00000379019 KIF2CQ99661 725 aa9.53□□□□□ -0.88
GPCPD1-201ENST00000379019 PHF8Q9UPP1 1060 aa9.53□□□□□ -0.88
GPCPD1-201ENST00000379019 ALS2Q96Q42 1657 aa9.52□□□□□ -0.88
GPCPD1-201ENST00000379019 PHF23Q9BUL5 403 aaPredicted RBP9.51□□□□□ -0.89
GPCPD1-201ENST00000379019 PKP1Q13835 747 aa9.51□□□□□ -0.89
GPCPD1-201ENST00000379019 TSR2Q969E8 191 aaKnown RBP9.51□□□□□ -0.89
GPCPD1-201ENST00000379019 SPATA31A3Q5VYP0 1347 aa9.51□□□□□ -0.89
GPCPD1-201ENST00000379019 USP35Q9P2H5 1018 aa9.5□□□□□ -0.89
GPCPD1-201ENST00000379019 COL14A1Q05707 1796 aaKnown RBP9.5□□□□□ -0.89
GPCPD1-201ENST00000379019 ABCA3Q99758 1704 aa9.5□□□□□ -0.89
GPCPD1-201ENST00000379019 FSD2A1L4K1 749 aa9.5□□□□□ -0.89
GPCPD1-201ENST00000379019 WWC1Q8IX03 1113 aa9.5□□□□□ -0.89
GPCPD1-201ENST00000379019 STK26Q9P289 416 aa9.5□□□□□ -0.89
GPCPD1-201ENST00000379019 TTC21AQ8NDW8 1320 aa9.49□□□□□ -0.89
GPCPD1-201ENST00000379019 TMEM132EQ6IEE7 984 aa9.49□□□□□ -0.89
GPCPD1-201ENST00000379019 CCDC61Q9Y6R9 512 aa9.49□□□□□ -0.89
GPCPD1-201ENST00000379019 AKAP12Q02952 1782 aa9.49□□□□□ -0.89
GPCPD1-201ENST00000379019 ESCO1Q5FWF5 840 aa9.49□□□□□ -0.89
GPCPD1-201ENST00000379019 DDIT3P35638 169 aa9.49□□□□□ -0.89
GPCPD1-201ENST00000379019 CRYBG1Q9Y4K1 1723 aa9.48□□□□□ -0.89
GPCPD1-201ENST00000379019 CENPQQ7L2Z9 268 aaPredicted RBP9.48□□□□□ -0.89
GPCPD1-201ENST00000379019 MEX3CQ5U5Q3 659 aaKnown RBP9.48□□□□□ -0.89
GPCPD1-201ENST00000379019 SLC12A5Q9H2X9 1139 aa9.48□□□□□ -0.89
GPCPD1-201ENST00000379019 FOXD4L1Q9NU39 408 aa9.48□□□□□ -0.89
GPCPD1-201ENST00000379019 TCHHQ07283 1943 aa9.48□□□□□ -0.89
GPCPD1-201ENST00000379019 PDZRN3Q9UPQ7 1066 aa9.47□□□□□ -0.89
GPCPD1-201ENST00000379019 TRAK1Q9UPV9 953 aa9.47□□□□□ -0.89
GPCPD1-201ENST00000379019 KRT28Q7Z3Y7 464 aa9.47□□□□□ -0.89
GPCPD1-201ENST00000379019 WAPLQ7Z5K2 1190 aa9.47□□□□□ -0.89
GPCPD1-201ENST00000379019 GOLGA2Q08379 1002 aa9.47□□□□□ -0.89
GPCPD1-201ENST00000379019 TBC1D32Q96NH3 1257 aa9.46□□□□□ -0.89
GPCPD1-201ENST00000379019 MON2Q7Z3U7 1717 aa9.46□□□□□ -0.89
GPCPD1-201ENST00000379019 SLIT3O75094 1523 aa9.46□□□□□ -0.89
GPCPD1-201ENST00000379019 RARSP54136 660 aaKnown RBP9.46□□□□□ -0.9
GPCPD1-201ENST00000379019 NUDT16Q96DE0 195 aaKnown RBP9.46□□□□□ -0.9
GPCPD1-201ENST00000379019 CDK19Q9BWU1 502 aa9.45□□□□□ -0.9
GPCPD1-201ENST00000379019 ZMYND15Q9H091 742 aa9.45□□□□□ -0.9
GPCPD1-201ENST00000379019 LRP6O75581 1613 aa9.45□□□□□ -0.9
GPCPD1-201ENST00000379019 CPDO75976 1380 aa9.45□□□□□ -0.9
GPCPD1-201ENST00000379019 ATRNO75882 1429 aa9.45□□□□□ -0.9
GPCPD1-201ENST00000379019 NRKQ7Z2Y5 1582 aa9.45□□□□□ -0.9
GPCPD1-201ENST00000379019 PHRF1Q9P1Y6 1649 aaKnown RBP9.45□□□□□ -0.9
GPCPD1-201ENST00000379019 FNBP4Q8N3X1 1017 aaPredicted RBP9.45□□□□□ -0.9
GPCPD1-201ENST00000379019 NGLY1Q96IV0 654 aa9.45□□□□□ -0.9
GPCPD1-201ENST00000379019 PPIP5K1Q6PFW1 1433 aa9.45□□□□□ -0.9
GPCPD1-201ENST00000379019 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.45□□□□□ -0.9
GPCPD1-201ENST00000379019 NSFL1CQ9UNZ2 370 aaKnown RBP9.45□□□□□ -0.9
GPCPD1-201ENST00000379019 SLIT2O94813 1529 aa9.44□□□□□ -0.9
GPCPD1-201ENST00000379019 USP31Q70CQ4 1352 aa9.44□□□□□ -0.9
GPCPD1-201ENST00000379019 PLEKHG2Q9H7P9 1386 aa9.44□□□□□ -0.9
GPCPD1-201ENST00000379019 PDE3BQ13370 1112 aa9.44□□□□□ -0.9
GPCPD1-201ENST00000379019 PPM1GO15355 546 aaPredicted RBP9.44□□□□□ -0.9
GPCPD1-201ENST00000379019 CPSF1Q10570 1443 aaKnown RBP9.43□□□□□ -0.9
GPCPD1-201ENST00000379019 USP6P35125 1406 aa9.43□□□□□ -0.9
GPCPD1-201ENST00000379019 TRPC5Q9UL62 973 aaPredicted RBP9.43□□□□□ -0.9
GPCPD1-201ENST00000379019 SSH2Q76I76 1423 aa9.43□□□□□ -0.9
GPCPD1-201ENST00000379019 MINK1Q8N4C8 1332 aaPredicted RBP9.43□□□□□ -0.9
GPCPD1-201ENST00000379019 SIRT2Q8IXJ6 389 aa9.43□□□□□ -0.9
GPCPD1-201ENST00000379019 NGDNQ8NEJ9 315 aaKnown RBP9.43□□□□□ -0.9
GPCPD1-201ENST00000379019 ORAI2Q96SN7 254 aa9.43□□□□□ -0.9
GPCPD1-201ENST00000379019 EDC4Q6P2E9 1401 aaKnown RBP9.43□□□□□ -0.9
GPCPD1-201ENST00000379019 TERF2IPQ9NYB0 399 aa9.42□□□□□ -0.9
GPCPD1-201ENST00000379019 PLCH1Q4KWH8 1693 aa9.42□□□□□ -0.9
GPCPD1-201ENST00000379019 SOCS7O14512 581 aa9.42□□□□□ -0.9
GPCPD1-201ENST00000379019 C1orf115Q9H7X2 142 aa9.42□□□□□ -0.9
GPCPD1-201ENST00000379019 RGPD8O14715 1765 aaPredicted RBP9.42□□□□□ -0.9
GPCPD1-201ENST00000379019 FAM43AQ8N2R8 423 aa9.42□□□□□ -0.9
GPCPD1-201ENST00000379019 NRAPQ86VF7 1730 aa9.42□□□□□ -0.9
GPCPD1-201ENST00000379019 RBM6P78332 1123 aaKnown RBP9.42□□□□□ -0.9
GPCPD1-201ENST00000379019 TMF1P82094 1093 aa9.42□□□□□ -0.9
GPCPD1-201ENST00000379019 HDGFL2Q7Z4V5 671 aaPredicted RBP9.42□□□□□ -0.9
GPCPD1-201ENST00000379019 KCNH5Q8NCM2 988 aa9.42□□□□□ -0.9
GPCPD1-201ENST00000379019 THUMPD2Q9BTF0 503 aaKnown RBP9.42□□□□□ -0.9
GPCPD1-201ENST00000379019 KIF24Q5T7B8 1368 aa9.41□□□□□ -0.9
GPCPD1-201ENST00000379019 FAM208AQ9UK61 1670 aaKnown RBP9.41□□□□□ -0.9
GPCPD1-201ENST00000379019 PRR36Q9H6K5 1346 aa9.41□□□□□ -0.9
GPCPD1-201ENST00000379019 TCP11L2Q8N4U5 519 aa9.41□□□□□ -0.9
GPCPD1-201ENST00000379019 TSC1Q92574 1164 aa9.41□□□□□ -0.9
GPCPD1-201ENST00000379019 SRPK2P78362 688 aaKnown RBP9.4□□□□□ -0.9
GPCPD1-201ENST00000379019 CCDC125Q86Z20 511 aa9.4□□□□□ -0.9
GPCPD1-201ENST00000379019 COL9A3Q14050 684 aaPredicted RBP9.4□□□□□ -0.9
GPCPD1-201ENST00000379019 LAMA3Q16787 3333 aa9.4□□□□□ -0.91
GPCPD1-201ENST00000379019 TRIM35Q9UPQ4 493 aa9.39□□□□□ -0.91
GPCPD1-201ENST00000379019 TRIM27P14373 513 aa9.39□□□□□ -0.91
GPCPD1-201ENST00000379019 MCM4P33991 863 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms