RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 RGPD1P0DJD0 1748 aa23.03■■□□□ 1.28
LYSMD4-203ENST00000378904 ALS2Q96Q42 1657 aa23.02■■□□□ 1.28
LYSMD4-203ENST00000378904 NFAT5O94916 1531 aa23.02■■□□□ 1.28
LYSMD4-203ENST00000378904 KIF24Q5T7B8 1368 aa23.02■■□□□ 1.28
LYSMD4-203ENST00000378904 TMPOP42166 694 aaKnown RBP23.02■■□□□ 1.28
LYSMD4-203ENST00000378904 SPINK5Q9NQ38 1064 aaPredicted RBP23.02■■□□□ 1.28
LYSMD4-203ENST00000378904 TRMT2AQ8IZ69 625 aaKnown RBP23■■□□□ 1.27
LYSMD4-203ENST00000378904 E9PSI1 815 aa23■■□□□ 1.27
LYSMD4-203ENST00000378904 NEFMP07197 916 aa22.99■■□□□ 1.27
LYSMD4-203ENST00000378904 LMOD2Q6P5Q4 547 aa22.99■■□□□ 1.27
LYSMD4-203ENST00000378904 KCNH5Q8NCM2 988 aa22.99■■□□□ 1.27
LYSMD4-203ENST00000378904 DDX17Q92841 729 aaKnown RBP22.99■■□□□ 1.27
LYSMD4-203ENST00000378904 RCAN3Q9UKA8 241 aa22.99■■□□□ 1.27
LYSMD4-203ENST00000378904 RNF123Q5XPI4 1314 aa22.99■■□□□ 1.27
LYSMD4-203ENST00000378904 NPHP3Q7Z494 1330 aa22.99■■□□□ 1.27
LYSMD4-203ENST00000378904 SLIT3O75094 1523 aa22.99■■□□□ 1.27
LYSMD4-203ENST00000378904 IRX6P78412 446 aaPredicted RBP22.99■■□□□ 1.27
LYSMD4-203ENST00000378904 HOXC9P31274 260 aa22.98■■□□□ 1.27
LYSMD4-203ENST00000378904 WDR63Q8IWG1 891 aa22.98■■□□□ 1.27
LYSMD4-203ENST00000378904 ANP32EQ9BTT0 268 aa22.97■■□□□ 1.27
LYSMD4-203ENST00000378904 PHACTR3Q96KR7 559 aa22.96■■□□□ 1.27
LYSMD4-203ENST00000378904 RTL1A6NKG5 1358 aa22.96■■□□□ 1.27
LYSMD4-203ENST00000378904 RIPK4P57078 832 aa22.96■■□□□ 1.27
LYSMD4-203ENST00000378904 BRINP3Q76B58 766 aa22.96■■□□□ 1.27
LYSMD4-203ENST00000378904 PHRF1Q9P1Y6 1649 aaKnown RBP22.95■■□□□ 1.27
LYSMD4-203ENST00000378904 USP19O94966 1318 aa22.95■■□□□ 1.26
LYSMD4-203ENST00000378904 SULT6B1Q6IMI4 303 aa22.95■■□□□ 1.26
LYSMD4-203ENST00000378904 PXDNQ92626 1479 aa22.95■■□□□ 1.26
LYSMD4-203ENST00000378904 SLAIN2Q9P270 581 aa22.95■■□□□ 1.26
LYSMD4-203ENST00000378904 TRIM35Q9UPQ4 493 aa22.95■■□□□ 1.26
LYSMD4-203ENST00000378904 AEBP1Q8IUX7 1158 aa22.94■■□□□ 1.26
LYSMD4-203ENST00000378904 GCP02774 474 aa22.94■■□□□ 1.26
LYSMD4-203ENST00000378904 DLG5Q8TDM6 1919 aa22.93■■□□□ 1.26
LYSMD4-203ENST00000378904 ARHGEF10O15013 1369 aa22.93■■□□□ 1.26
LYSMD4-203ENST00000378904 PLEKHG5O94827 1062 aa22.92■■□□□ 1.26
LYSMD4-203ENST00000378904 NFE2L2Q16236 605 aa22.92■■□□□ 1.26
LYSMD4-203ENST00000378904 TNS3Q68CZ2 1445 aa22.91■■□□□ 1.26
LYSMD4-203ENST00000378904 MED1Q15648 1581 aaPredicted RBP22.91■■□□□ 1.26
LYSMD4-203ENST00000378904 IP6K1Q92551 441 aa22.91■■□□□ 1.26
LYSMD4-203ENST00000378904 EYA1Q99502 592 aa22.9■■□□□ 1.26
LYSMD4-203ENST00000378904 IGSF1Q8N6C5 1336 aa22.9■■□□□ 1.26
LYSMD4-203ENST00000378904 ZBTB7CA1YPR0 619 aa22.88■■□□□ 1.25
LYSMD4-203ENST00000378904 RRP1P56182 461 aaKnown RBP22.88■■□□□ 1.25
LYSMD4-203ENST00000378904 ARHGEF25Q86VW2 580 aa22.88■■□□□ 1.25
LYSMD4-203ENST00000378904 KDRP35968 1356 aa22.88■■□□□ 1.25
LYSMD4-203ENST00000378904 SPATA31A3Q5VYP0 1347 aa22.87■■□□□ 1.25
LYSMD4-203ENST00000378904 LTV1Q96GA3 475 aaPredicted RBP22.87■■□□□ 1.25
LYSMD4-203ENST00000378904 ERICH6BQ5W0A0 696 aa22.87■■□□□ 1.25
LYSMD4-203ENST00000378904 CRYBG1Q9Y4K1 1723 aa22.86■■□□□ 1.25
LYSMD4-203ENST00000378904 LTBP4Q8N2S1 1624 aa22.86■■□□□ 1.25
LYSMD4-203ENST00000378904 MYH16Q9H6N6 1097 aa22.85■■□□□ 1.25
LYSMD4-203ENST00000378904 IL16Q14005 1332 aa22.85■■□□□ 1.25
LYSMD4-203ENST00000378904 NHSL1Q5SYE7 1610 aa22.84■■□□□ 1.25
LYSMD4-203ENST00000378904 SOS2Q07890 1332 aaPredicted RBP22.83■■□□□ 1.25
LYSMD4-203ENST00000378904 RGPD2P0DJD1 1756 aa22.83■■□□□ 1.25
LYSMD4-203ENST00000378904 RGPD5Q99666 1765 aa22.83■■□□□ 1.24
LYSMD4-203ENST00000378904 LMOD3Q0VAK6 560 aa22.82■■□□□ 1.24
LYSMD4-203ENST00000378904 ZC3H6P61129 1189 aaKnown RBP22.8■■□□□ 1.24
LYSMD4-203ENST00000378904 CABLES1Q8TDN4 633 aa22.8■■□□□ 1.24
LYSMD4-203ENST00000378904 FANCIQ9NVI1 1328 aa22.8■■□□□ 1.24
LYSMD4-203ENST00000378904 TSR2Q969E8 191 aaKnown RBP22.79■■□□□ 1.24
LYSMD4-203ENST00000378904 THUMPD2Q9BTF0 503 aaKnown RBP22.78■■□□□ 1.24
LYSMD4-203ENST00000378904 PLIN1O60240 522 aa22.78■■□□□ 1.24
LYSMD4-203ENST00000378904 CALD1Q05682 793 aaKnown RBP22.78■■□□□ 1.24
LYSMD4-203ENST00000378904 NBPF6Q5VWK0 638 aa22.77■■□□□ 1.24
LYSMD4-203ENST00000378904 USHBP1Q8N6Y0 703 aa22.77■■□□□ 1.24
LYSMD4-203ENST00000378904 NBPF4Q96M43 638 aa22.77■■□□□ 1.24
LYSMD4-203ENST00000378904 AXIN2Q9Y2T1 843 aa22.77■■□□□ 1.24
LYSMD4-203ENST00000378904 COL18A1P39060 1754 aa22.76■■□□□ 1.23
LYSMD4-203ENST00000378904 FAM83GA6ND36 823 aa22.76■■□□□ 1.23
LYSMD4-203ENST00000378904 MTHFSDQ2M296 383 aaKnown RBP22.76■■□□□ 1.23
LYSMD4-203ENST00000378904 ANKRD24Q8TF21 1146 aa22.75■■□□□ 1.23
LYSMD4-203ENST00000378904 LRRC59Q96AG4 307 aaKnown RBP22.75■■□□□ 1.23
LYSMD4-203ENST00000378904 PPP4R2Q9NY27 417 aa22.75■■□□□ 1.23
LYSMD4-203ENST00000378904 ROBO1Q9Y6N7 1651 aa22.74■■□□□ 1.23
LYSMD4-203ENST00000378904 DCTN1Q14203 1278 aa22.74■■□□□ 1.23
LYSMD4-203ENST00000378904 CAMTA1Q9Y6Y1 1673 aa22.74■■□□□ 1.23
LYSMD4-203ENST00000378904 BCAR3O75815 825 aa22.73■■□□□ 1.23
LYSMD4-203ENST00000378904 GAS2L2Q8NHY3 880 aa22.73■■□□□ 1.23
LYSMD4-203ENST00000378904 LAS1LQ9Y4W2 734 aaKnown RBP22.73■■□□□ 1.23
LYSMD4-203ENST00000378904 EXOSC9Q06265 439 aaKnown RBP22.73■■□□□ 1.23
LYSMD4-203ENST00000378904 IFT57Q9NWB7 429 aa22.73■■□□□ 1.23
LYSMD4-203ENST00000378904 ABCA3Q99758 1704 aa22.72■■□□□ 1.23
LYSMD4-203ENST00000378904 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.72■■□□□ 1.23
LYSMD4-203ENST00000378904 ABCC6O95255 1503 aa22.72■■□□□ 1.23
LYSMD4-203ENST00000378904 GNAI1P63096 354 aa22.72■■□□□ 1.23
LYSMD4-203ENST00000378904 NCAPD2Q15021 1401 aa22.71■■□□□ 1.23
LYSMD4-203ENST00000378904 CPDO75976 1380 aa22.71■■□□□ 1.23
LYSMD4-203ENST00000378904 ERBB3P21860 1342 aa22.71■■□□□ 1.23
LYSMD4-203ENST00000378904 CT47B1P0C2W7 299 aaPredicted RBP22.7■■□□□ 1.23
LYSMD4-203ENST00000378904 ZNF853P0CG23 659 aa22.7■■□□□ 1.23
LYSMD4-203ENST00000378904 RARSP54136 660 aaKnown RBP22.7■■□□□ 1.23
LYSMD4-203ENST00000378904 KIAA0232Q92628 1395 aa22.7■■□□□ 1.22
LYSMD4-203ENST00000378904 MCM10Q7L590 875 aa22.7■■□□□ 1.22
LYSMD4-203ENST00000378904 CFAP44Q96MT7 982 aa22.69■■□□□ 1.22
LYSMD4-203ENST00000378904 LMO7Q8WWI1 1683 aa22.69■■□□□ 1.22
LYSMD4-203ENST00000378904 CHRNA2Q15822 529 aa22.68■■□□□ 1.22
LYSMD4-203ENST00000378904 EXOC6Q8TAG9 804 aa22.67■■□□□ 1.22
LYSMD4-203ENST00000378904 MBIPQ9NS73 344 aa22.67■■□□□ 1.22
LYSMD4-203ENST00000378904 C20orf194Q5TEA3 1177 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms