RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 RRP7AQ9Y3A4 280 aaKnown RBP10.15□□□□□ -0.78
PTPRR-203ENST00000378778 DDX49Q9Y6V7 483 aaKnown RBP10.15□□□□□ -0.78
PTPRR-203ENST00000378778 GLI2P10070 1586 aa10.15□□□□□ -0.78
PTPRR-203ENST00000378778 U2AF1L5P0DN76 240 aaPredicted RBP10.15□□□□□ -0.79
PTPRR-203ENST00000378778 U2AF1Q01081 240 aaKnown RBP eCLIP10.15□□□□□ -0.79
PTPRR-203ENST00000378778 NEUROD2Q15784 382 aa10.15□□□□□ -0.79
PTPRR-203ENST00000378778 CD109Q6YHK3 1445 aa10.14□□□□□ -0.79
PTPRR-203ENST00000378778 CYP2E1P05181 493 aaPredicted RBP10.14□□□□□ -0.79
PTPRR-203ENST00000378778 CCDC39Q9UFE4 941 aa10.14□□□□□ -0.79
PTPRR-203ENST00000378778 NOB1Q9ULX3 412 aaKnown RBP10.14□□□□□ -0.79
PTPRR-203ENST00000378778 PIK3C2BO00750 1634 aa10.14□□□□□ -0.79
PTPRR-203ENST00000378778 TMEM57Q8N5G2 664 aa10.14□□□□□ -0.79
PTPRR-203ENST00000378778 PODXL2Q9NZ53 605 aa10.14□□□□□ -0.79
PTPRR-203ENST00000378778 PNPLA6Q8IY17 1366 aa10.13□□□□□ -0.79
PTPRR-203ENST00000378778 SMAP1Q8IYB5 467 aaPredicted RBP10.13□□□□□ -0.79
PTPRR-203ENST00000378778 BCL2L13Q9BXK5 485 aa10.13□□□□□ -0.79
PTPRR-203ENST00000378778 TRIM35Q9UPQ4 493 aa10.13□□□□□ -0.79
PTPRR-203ENST00000378778 TULP4Q9NRJ4 1543 aa10.13□□□□□ -0.79
PTPRR-203ENST00000378778 MBD3O95983 291 aa10.13□□□□□ -0.79
PTPRR-203ENST00000378778 ZKSCAN5Q9Y2L8 839 aa10.12□□□□□ -0.79
PTPRR-203ENST00000378778 TBC1D9Q6ZT07 1266 aa10.12□□□□□ -0.79
PTPRR-203ENST00000378778 HECW2Q9P2P5 1572 aa10.12□□□□□ -0.79
PTPRR-203ENST00000378778 ATAD2Q6PL18 1390 aa10.12□□□□□ -0.79
PTPRR-203ENST00000378778 KIF20BQ96Q89 1820 aa10.12□□□□□ -0.79
PTPRR-203ENST00000378778 FCHSD2O94868 740 aa10.11□□□□□ -0.79
PTPRR-203ENST00000378778 TMEM132AQ24JP5 1023 aa10.11□□□□□ -0.79
PTPRR-203ENST00000378778 SASS6Q6UVJ0 657 aa10.11□□□□□ -0.79
PTPRR-203ENST00000378778 SLC12A5Q9H2X9 1139 aa10.11□□□□□ -0.79
PTPRR-203ENST00000378778 ZBTB7BO15156 539 aaPredicted RBP10.1□□□□□ -0.79
PTPRR-203ENST00000378778 SSFA2P28290 1259 aa10.1□□□□□ -0.79
PTPRR-203ENST00000378778 MCM2P49736 904 aa10.1□□□□□ -0.79
PTPRR-203ENST00000378778 ZSCAN23Q3MJ62 389 aa10.1□□□□□ -0.79
PTPRR-203ENST00000378778 CASC1Q6TDU7 716 aa10.1□□□□□ -0.79
PTPRR-203ENST00000378778 LMBRD1Q9NUN5 540 aa10.1□□□□□ -0.79
PTPRR-203ENST00000378778 UGGT1Q9NYU2 1555 aa10.1□□□□□ -0.79
PTPRR-203ENST00000378778 ABCC4O15439 1325 aa10.1□□□□□ -0.79
PTPRR-203ENST00000378778 ST18O60284 1047 aa10.1□□□□□ -0.79
PTPRR-203ENST00000378778 API5Q9BZZ5 524 aaKnown RBP10.1□□□□□ -0.79
PTPRR-203ENST00000378778 LNPKQ9C0E8 428 aa10.1□□□□□ -0.79
PTPRR-203ENST00000378778 KIDINS220Q9ULH0 1771 aa10.09□□□□□ -0.79
PTPRR-203ENST00000378778 RIPK4P57078 832 aa10.09□□□□□ -0.79
PTPRR-203ENST00000378778 INTS3Q68E01 1043 aaKnown RBP10.09□□□□□ -0.79
PTPRR-203ENST00000378778 LRSAM1Q6UWE0 723 aa10.09□□□□□ -0.79
PTPRR-203ENST00000378778 GAS2L2Q8NHY3 880 aa10.09□□□□□ -0.79
PTPRR-203ENST00000378778 SYAP1Q96A49 352 aaPredicted RBP10.09□□□□□ -0.79
PTPRR-203ENST00000378778 CAMSAP1Q5T5Y3 1602 aa10.09□□□□□ -0.79
PTPRR-203ENST00000378778 HMGN5P82970 282 aaKnown RBP10.08□□□□□ -0.8
PTPRR-203ENST00000378778 UVSSAQ2YD98 709 aa10.08□□□□□ -0.8
PTPRR-203ENST00000378778 UTP14CQ5TAP6 766 aaKnown RBP10.08□□□□□ -0.8
PTPRR-203ENST00000378778 ANKRD45Q5TZF3 282 aa10.08□□□□□ -0.8
PTPRR-203ENST00000378778 TSR2Q969E8 191 aaKnown RBP10.08□□□□□ -0.8
PTPRR-203ENST00000378778 ABCC3O15438 1527 aa10.08□□□□□ -0.8
PTPRR-203ENST00000378778 FAM135BQ49AJ0 1406 aa10.08□□□□□ -0.8
PTPRR-203ENST00000378778 KIF3BO15066 747 aa10.08□□□□□ -0.8
PTPRR-203ENST00000378778 PHF14O94880 888 aa10.08□□□□□ -0.8
PTPRR-203ENST00000378778 FAM184AQ8NB25 1140 aa10.08□□□□□ -0.8
PTPRR-203ENST00000378778 PRIMPOLQ96LW4 560 aa10.08□□□□□ -0.8
PTPRR-203ENST00000378778 TERF2IPQ9NYB0 399 aa10.08□□□□□ -0.8
PTPRR-203ENST00000378778 EPB41L2O43491 1005 aaKnown RBP10.07□□□□□ -0.8
PTPRR-203ENST00000378778 SLC4A2P04920 1241 aa10.07□□□□□ -0.8
PTPRR-203ENST00000378778 GNAI1P63096 354 aa10.07□□□□□ -0.8
PTPRR-203ENST00000378778 LMOD3Q0VAK6 560 aa10.07□□□□□ -0.8
PTPRR-203ENST00000378778 MRPL50Q8N5N7 158 aaKnown RBP10.07□□□□□ -0.8
PTPRR-203ENST00000378778 DIAPH1O60610 1272 aaKnown RBP10.07□□□□□ -0.8
PTPRR-203ENST00000378778 REC8O95072 547 aa10.07□□□□□ -0.8
PTPRR-203ENST00000378778 ILDR1Q86SU0 546 aaPredicted RBP10.07□□□□□ -0.8
PTPRR-203ENST00000378778 IFT57Q9NWB7 429 aa10.07□□□□□ -0.8
PTPRR-203ENST00000378778 VGFO15240 615 aaPredicted RBP10.06□□□□□ -0.8
PTPRR-203ENST00000378778 NCLP19338 710 aaKnown RBP10.06□□□□□ -0.8
PTPRR-203ENST00000378778 USP26Q9BXU7 913 aa10.06□□□□□ -0.8
PTPRR-203ENST00000378778 NEXMIFQ5QGS0 1516 aa10.06□□□□□ -0.8
PTPRR-203ENST00000378778 CPSF1Q10570 1443 aaKnown RBP10.06□□□□□ -0.8
PTPRR-203ENST00000378778 UQCRHLA0A096LP55 91 aa10.06□□□□□ -0.8
PTPRR-203ENST00000378778 UQCRHP07919 91 aa10.06□□□□□ -0.8
PTPRR-203ENST00000378778 TTC22Q5TAA0 569 aa10.06□□□□□ -0.8
PTPRR-203ENST00000378778 DCTPP1Q9H773 170 aa10.06□□□□□ -0.8
PTPRR-203ENST00000378778 LRRC7Q96NW7 1537 aa10.06□□□□□ -0.8
PTPRR-203ENST00000378778 MCTP1Q6DN14 999 aa10.05□□□□□ -0.8
PTPRR-203ENST00000378778 PAXIP1Q6ZW49 1069 aaPredicted RBP10.05□□□□□ -0.8
PTPRR-203ENST00000378778 AFAP1Q8N556 730 aa10.05□□□□□ -0.8
PTPRR-203ENST00000378778 TRAK1Q9UPV9 953 aa10.05□□□□□ -0.8
PTPRR-203ENST00000378778 R3HCC1Q9Y3T6 440 aaKnown RBP10.05□□□□□ -0.8
PTPRR-203ENST00000378778 CD2BP2O95400 341 aaKnown RBP10.05□□□□□ -0.8
PTPRR-203ENST00000378778 TNNT2P45379 298 aaPredicted RBP10.05□□□□□ -0.8
PTPRR-203ENST00000378778 CAVIN1Q6NZI2 390 aaKnown RBP10.05□□□□□ -0.8
PTPRR-203ENST00000378778 RPAP2Q8IXW5 612 aaPredicted RBP10.05□□□□□ -0.8
PTPRR-203ENST00000378778 IL17RAQ96F46 866 aa10.05□□□□□ -0.8
PTPRR-203ENST00000378778 RBSNQ9H1K0 784 aa10.05□□□□□ -0.8
PTPRR-203ENST00000378778 A0A1W2PP64 1363 aa10.05□□□□□ -0.8
PTPRR-203ENST00000378778 LETM1O95202 739 aaPredicted RBP10.04□□□□□ -0.8
PTPRR-203ENST00000378778 GTF2F1P35269 517 aaKnown RBP eCLIP10.04□□□□□ -0.8
PTPRR-203ENST00000378778 INTS4Q96HW7 963 aaKnown RBP10.04□□□□□ -0.8
PTPRR-203ENST00000378778 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.04□□□□□ -0.8
PTPRR-203ENST00000378778 PRDM4Q9UKN5 801 aa10.04□□□□□ -0.8
PTPRR-203ENST00000378778 VAMP4O75379 141 aa10.04□□□□□ -0.8
PTPRR-203ENST00000378778 KIAA2012Q0VF49 1180 aa10.04□□□□□ -0.8
PTPRR-203ENST00000378778 PLEKHM2Q8IWE5 1019 aa10.04□□□□□ -0.8
PTPRR-203ENST00000378778 NPATQ14207 1427 aa10.04□□□□□ -0.8
PTPRR-203ENST00000378778 MLH3Q9UHC1 1453 aa10.04□□□□□ -0.8
PTPRR-203ENST00000378778 U2SURPO15042 1029 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms