RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 DDX11L8A8MPP1 907 aa8.39□□□□□ -1.07
CDKAL1-202ENST00000378610 ILDR1Q86SU0 546 aaPredicted RBP8.39□□□□□ -1.07
CDKAL1-202ENST00000378610 MYH16Q9H6N6 1097 aa8.39□□□□□ -1.07
CDKAL1-202ENST00000378610 CHMP5Q9NZZ3 219 aa8.39□□□□□ -1.07
CDKAL1-202ENST00000378610 ANKRD50Q9ULJ7 1429 aa8.39□□□□□ -1.07
CDKAL1-202ENST00000378610 ASXL1Q8IXJ9 1541 aa8.38□□□□□ -1.07
CDKAL1-202ENST00000378610 PLEKHD1A6NEE1 506 aa8.38□□□□□ -1.07
CDKAL1-202ENST00000378610 TSR1Q2NL82 804 aaKnown RBP8.38□□□□□ -1.07
CDKAL1-202ENST00000378610 REPIN1Q9BWE0 567 aaKnown RBP8.38□□□□□ -1.07
CDKAL1-202ENST00000378610 CLTCL1P53675 1640 aa8.38□□□□□ -1.07
CDKAL1-202ENST00000378610 SPHKAPQ2M3C7 1700 aa8.38□□□□□ -1.07
CDKAL1-202ENST00000378610 YEATS2Q9ULM3 1422 aa8.38□□□□□ -1.07
CDKAL1-202ENST00000378610 ZNF500O60304 480 aaPredicted RBP8.38□□□□□ -1.07
CDKAL1-202ENST00000378610 GDPD2Q9HCC8 539 aa8.38□□□□□ -1.07
CDKAL1-202ENST00000378610 PPME1Q9Y570 386 aa8.38□□□□□ -1.07
CDKAL1-202ENST00000378610 GOLGA2Q08379 1002 aa8.37□□□□□ -1.07
CDKAL1-202ENST00000378610 GAS2L3Q86XJ1 694 aa8.37□□□□□ -1.07
CDKAL1-202ENST00000378610 MICAL1Q8TDZ2 1067 aa8.37□□□□□ -1.07
CDKAL1-202ENST00000378610 UBXN4Q92575 508 aa8.37□□□□□ -1.07
CDKAL1-202ENST00000378610 ADAMTS8Q9UP79 889 aa8.37□□□□□ -1.07
CDKAL1-202ENST00000378610 SRPK2P78362 688 aaKnown RBP8.37□□□□□ -1.07
CDKAL1-202ENST00000378610 CCDC173Q0VFZ6 552 aa8.37□□□□□ -1.07
CDKAL1-202ENST00000378610 CAMK2BQ13554 666 aa8.37□□□□□ -1.07
CDKAL1-202ENST00000378610 MFSD10Q14728 455 aa8.37□□□□□ -1.07
CDKAL1-202ENST00000378610 KIAA1211Q6ZU35 1233 aa8.37□□□□□ -1.07
CDKAL1-202ENST00000378610 RASEFQ8IZ41 740 aa8.37□□□□□ -1.07
CDKAL1-202ENST00000378610 NGEFQ8N5V2 710 aa8.37□□□□□ -1.07
CDKAL1-202ENST00000378610 PLA2R1Q13018 1463 aa8.37□□□□□ -1.07
CDKAL1-202ENST00000378610 DNAJC14Q6Y2X3 702 aaPredicted RBP8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 MTERF4Q7Z6M4 381 aaKnown RBP8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 SLKQ9H2G2 1235 aaPredicted RBP8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.36□□□□□ -1.074e-7■■■□□ 15.7
CDKAL1-202ENST00000378610 PPRC1Q5VV67 1664 aaKnown RBP8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 REREQ9P2R6 1566 aa8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 KANK1Q14678 1352 aa8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 NOM1Q5C9Z4 860 aaKnown RBP8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 ZSCAN30Q86W11 494 aa8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 SNX21Q969T3 373 aa8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 USP32Q8NFA0 1604 aa8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 KDM5AP29375 1690 aaKnown RBP8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 NEURL4Q96JN8 1562 aa8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 CFAP74Q9C0B2 1584 aa8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 RGS3P49796 1198 aa8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 TEX2Q8IWB9 1127 aa8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 MYO3AQ8NEV4 1616 aa8.36□□□□□ -1.07
CDKAL1-202ENST00000378610 FECHP22830 423 aa8.35□□□□□ -1.07
CDKAL1-202ENST00000378610 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.35□□□□□ -1.07
CDKAL1-202ENST00000378610 SMC5Q8IY18 1101 aa8.35□□□□□ -1.07
CDKAL1-202ENST00000378610 PDLIM2Q96JY6 352 aa8.35□□□□□ -1.07
CDKAL1-202ENST00000378610 DUOX2Q9NRD8 1548 aa8.35□□□□□ -1.07
CDKAL1-202ENST00000378610 PTMSP20962 102 aa8.35□□□□□ -1.07
CDKAL1-202ENST00000378610 EXOC8Q8IYI6 725 aa8.35□□□□□ -1.07
CDKAL1-202ENST00000378610 VRTNQ9H8Y1 702 aa8.35□□□□□ -1.07
CDKAL1-202ENST00000378610 SLC52A1Q9NWF4 448 aa8.35□□□□□ -1.07
CDKAL1-202ENST00000378610 ZBTB12Q9Y330 459 aaPredicted RBP8.35□□□□□ -1.07
CDKAL1-202ENST00000378610 ADGRB2O60241 1585 aa8.35□□□□□ -1.07
CDKAL1-202ENST00000378610 SUGT1Q9Y2Z0 365 aa8.34□□□□□ -1.07
CDKAL1-202ENST00000378610 ZNF644Q9H582 1327 aaPredicted RBP8.34□□□□□ -1.07
CDKAL1-202ENST00000378610 PREX2Q70Z35 1606 aa8.34□□□□□ -1.07
CDKAL1-202ENST00000378610 RAB11FIP3O75154 756 aa8.34□□□□□ -1.07
CDKAL1-202ENST00000378610 DMTNQ08495 405 aa8.34□□□□□ -1.07
CDKAL1-202ENST00000378610 DDX27Q96GQ7 796 aaKnown RBP8.34□□□□□ -1.07
CDKAL1-202ENST00000378610 RAB3GAP1Q15042 981 aa8.34□□□□□ -1.08
CDKAL1-202ENST00000378610 SKOR2Q2VWA4 1001 aaPredicted RBP8.34□□□□□ -1.08
CDKAL1-202ENST00000378610 CFAP70Q5T0N1 1121 aa8.34□□□□□ -1.08
CDKAL1-202ENST00000378610 TTC37Q6PGP7 1564 aa8.33□□□□□ -1.08
CDKAL1-202ENST00000378610 ABCA6Q8N139 1617 aa8.33□□□□□ -1.08
CDKAL1-202ENST00000378610 PPP2R1AP30153 589 aa8.33□□□□□ -1.08
CDKAL1-202ENST00000378610 FOSBP53539 338 aa8.33□□□□□ -1.08
CDKAL1-202ENST00000378610 RBM27Q9P2N5 1060 aaKnown RBP8.33□□□□□ -1.08
CDKAL1-202ENST00000378610 ZC3H6P61129 1189 aaKnown RBP8.33□□□□□ -1.08
CDKAL1-202ENST00000378610 NOL7Q9UMY1 257 aaKnown RBP8.33□□□□□ -1.08
CDKAL1-202ENST00000378610 DYNC1I1O14576 645 aa8.32□□□□□ -1.08
CDKAL1-202ENST00000378610 INO80Q9ULG1 1556 aaPredicted RBP8.32□□□□□ -1.08
CDKAL1-202ENST00000378610 ZC3H13Q5T200 1668 aaKnown RBP8.32□□□□□ -1.08
CDKAL1-202ENST00000378610 TMEM88BA6NKF7 163 aa8.32□□□□□ -1.08
CDKAL1-202ENST00000378610 UHRF1BP1LA0JNW5 1464 aa8.32□□□□□ -1.08
CDKAL1-202ENST00000378610 C9orf84Q5VXU9 1444 aa8.32□□□□□ -1.08
CDKAL1-202ENST00000378610 ZSCAN20P17040 1043 aaPredicted RBP8.32□□□□□ -1.08
CDKAL1-202ENST00000378610 PMFBP1Q8TBY8 1022 aa8.32□□□□□ -1.08
CDKAL1-202ENST00000378610 PRDM10Q9NQV6 1147 aa8.32□□□□□ -1.08
CDKAL1-202ENST00000378610 GNEQ9Y223 722 aaKnown RBP8.32□□□□□ -1.08
CDKAL1-202ENST00000378610 CDC42BPBQ9Y5S2 1711 aa8.31□□□□□ -1.08
CDKAL1-202ENST00000378610 BCAR3O75815 825 aa8.31□□□□□ -1.08
CDKAL1-202ENST00000378610 ZNF445P59923 1031 aa8.31□□□□□ -1.08
CDKAL1-202ENST00000378610 BCL2L13Q9BXK5 485 aa8.31□□□□□ -1.08
CDKAL1-202ENST00000378610 TPD52L2O43399 206 aaKnown RBP8.31□□□□□ -1.08
CDKAL1-202ENST00000378610 HSP90AB1P08238 724 aaKnown RBP8.31□□□□□ -1.08
CDKAL1-202ENST00000378610 MCM5P33992 734 aa8.31□□□□□ -1.08
CDKAL1-202ENST00000378610 NAALADL2Q58DX5 795 aa8.31□□□□□ -1.08
CDKAL1-202ENST00000378610 POLR3EQ9NVU0 708 aa8.31□□□□□ -1.08
CDKAL1-202ENST00000378610 GIPC2Q8TF65 315 aa8.3□□□□□ -1.08
CDKAL1-202ENST00000378610 PANK3Q9H999 370 aa8.3□□□□□ -1.08
CDKAL1-202ENST00000378610 FBXO31Q5XUX0 539 aaPredicted RBP8.3□□□□□ -1.08
CDKAL1-202ENST00000378610 TNPO1Q92973 898 aaKnown RBP8.3□□□□□ -1.08
CDKAL1-202ENST00000378610 CRISPLD2Q9H0B8 497 aa8.3□□□□□ -1.08
CDKAL1-202ENST00000378610 IFT172Q9UG01 1749 aa8.3□□□□□ -1.08
CDKAL1-202ENST00000378610 ZNF326Q5BKZ1 582 aaKnown RBP8.29□□□□□ -1.08
CDKAL1-202ENST00000378610 ZNF467Q7Z7K2 595 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms