RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 GGNBP2Q9H3C7 697 aa12.66□□□□□ -0.38
ARHGEF39-201ENST00000378387 CNPY2Q9Y2B0 182 aa12.66□□□□□ -0.38
ARHGEF39-201ENST00000378387 COL17A1Q9UMD9 1497 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF39-201ENST00000378387 INSRP06213 1382 aa12.66□□□□□ -0.38
ARHGEF39-201ENST00000378387 CCDC183Q5T5S1 534 aa12.66□□□□□ -0.38
ARHGEF39-201ENST00000378387 TAOK2Q9UL54 1235 aa12.66□□□□□ -0.38
ARHGEF39-201ENST00000378387 URB2Q14146 1524 aaKnown RBP12.65□□□□□ -0.38
ARHGEF39-201ENST00000378387 MAGI2Q86UL8 1455 aa12.65□□□□□ -0.38
ARHGEF39-201ENST00000378387 APPP05067 770 aa12.65□□□□□ -0.38
ARHGEF39-201ENST00000378387 FKBP5Q13451 457 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF39-201ENST00000378387 USP26Q9BXU7 913 aa12.65□□□□□ -0.38
ARHGEF39-201ENST00000378387 GCC2Q8IWJ2 1684 aa12.65□□□□□ -0.38
ARHGEF39-201ENST00000378387 ERC2O15083 957 aa12.65□□□□□ -0.38
ARHGEF39-201ENST00000378387 KDM4AO75164 1064 aa12.65□□□□□ -0.38
ARHGEF39-201ENST00000378387 TMPOP42166 694 aaKnown RBP12.65□□□□□ -0.38
ARHGEF39-201ENST00000378387 CKAP2LQ8IYA6 745 aa12.65□□□□□ -0.38
ARHGEF39-201ENST00000378387 HTATSF1O43719 755 aaKnown RBP12.65□□□□□ -0.39
ARHGEF39-201ENST00000378387 GTF3C6Q969F1 213 aa12.65□□□□□ -0.39
ARHGEF39-201ENST00000378387 MBD5Q9P267 1494 aa12.64□□□□□ -0.39
ARHGEF39-201ENST00000378387 FILIP1Q7Z7B0 1213 aa12.64□□□□□ -0.39
ARHGEF39-201ENST00000378387 AK9Q5TCS8 1911 aa12.64□□□□□ -0.39
ARHGEF39-201ENST00000378387 SDSP20132 328 aa12.64□□□□□ -0.39
ARHGEF39-201ENST00000378387 LRMPQ12912 555 aa12.64□□□□□ -0.39
ARHGEF39-201ENST00000378387 SKIDA1Q1XH10 827 aa12.64□□□□□ -0.39
ARHGEF39-201ENST00000378387 HMOX1P09601 288 aa12.64□□□□□ -0.39
ARHGEF39-201ENST00000378387 ZDHHC9Q9Y397 364 aa12.64□□□□□ -0.39
ARHGEF39-201ENST00000378387 C9orf84Q5VXU9 1444 aa12.63□□□□□ -0.39
ARHGEF39-201ENST00000378387 NOL10Q9BSC4 688 aaKnown RBP12.63□□□□□ -0.39
ARHGEF39-201ENST00000378387 SMC3Q9UQE7 1217 aa12.63□□□□□ -0.39
ARHGEF39-201ENST00000378387 WDR33Q9C0J8 1336 aaKnown RBP12.63□□□□□ -0.39
ARHGEF39-201ENST00000378387 TPM3P06753 285 aa12.63□□□□□ -0.39
ARHGEF39-201ENST00000378387 CCDC192P0DO97 292 aa12.63□□□□□ -0.39
ARHGEF39-201ENST00000378387 TEX35Q5T0J7 233 aa12.63□□□□□ -0.39
ARHGEF39-201ENST00000378387 GOLGA6L19H0YKK7 550 aa12.63□□□□□ -0.39
ARHGEF39-201ENST00000378387 GNL2Q13823 731 aaKnown RBP12.63□□□□□ -0.39
ARHGEF39-201ENST00000378387 UVSSAQ2YD98 709 aa12.63□□□□□ -0.39
ARHGEF39-201ENST00000378387 GABPB1Q06547 395 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF39-201ENST00000378387 FERMT3Q86UX7 667 aa12.62□□□□□ -0.39
ARHGEF39-201ENST00000378387 CCAR2Q8N163 923 aaKnown RBP12.62□□□□□ -0.39
ARHGEF39-201ENST00000378387 STK26Q9P289 416 aa12.62□□□□□ -0.39
ARHGEF39-201ENST00000378387 ATAD2Q6PL18 1390 aa12.62□□□□□ -0.39
ARHGEF39-201ENST00000378387 GSPT1P15170 499 aaKnown RBP12.62□□□□□ -0.39
ARHGEF39-201ENST00000378387 TOMM22Q9NS69 142 aa12.61□□□□□ -0.39
ARHGEF39-201ENST00000378387 TMEM132EQ6IEE7 984 aa12.61□□□□□ -0.39
ARHGEF39-201ENST00000378387 HOMER1Q86YM7 354 aa12.61□□□□□ -0.39
ARHGEF39-201ENST00000378387 PLEKHM2Q8IWE5 1019 aa12.61□□□□□ -0.39
ARHGEF39-201ENST00000378387 BECN2A8MW95 431 aa12.61□□□□□ -0.39
ARHGEF39-201ENST00000378387 TTC22Q5TAA0 569 aa12.61□□□□□ -0.39
ARHGEF39-201ENST00000378387 C10orf67Q8IYJ2 551 aa12.61□□□□□ -0.39
ARHGEF39-201ENST00000378387 CTTNBP2Q8WZ74 1663 aa12.61□□□□□ -0.39
ARHGEF39-201ENST00000378387 NCBP1Q09161 790 aaKnown RBP12.6□□□□□ -0.39
ARHGEF39-201ENST00000378387 ZRSR1Q15695 479 aaKnown RBP12.6□□□□□ -0.39
ARHGEF39-201ENST00000378387 DDX54Q8TDD1 881 aaKnown RBP12.6□□□□□ -0.39
ARHGEF39-201ENST00000378387 SYTL4Q96C24 671 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF39-201ENST00000378387 ST7Q9NRC1 585 aa12.6□□□□□ -0.39
ARHGEF39-201ENST00000378387 ATP6V1DQ9Y5K8 247 aa12.6□□□□□ -0.39
ARHGEF39-201ENST00000378387 PIK3C2GO75747 1445 aa12.6□□□□□ -0.39
ARHGEF39-201ENST00000378387 MX1P20591 662 aa12.6□□□□□ -0.39
ARHGEF39-201ENST00000378387 LUZP1Q86V48 1076 aa12.6□□□□□ -0.39
ARHGEF39-201ENST00000378387 KIAA1524Q8TCG1 905 aa12.6□□□□□ -0.39
ARHGEF39-201ENST00000378387 PTPN14Q15678 1187 aa12.6□□□□□ -0.39
ARHGEF39-201ENST00000378387 CEP135Q66GS9 1140 aa12.6□□□□□ -0.39
ARHGEF39-201ENST00000378387 RTEL1-TNFRSF6BF6WH68 1400 aa12.6□□□□□ -0.39
ARHGEF39-201ENST00000378387 BICD2Q8TD16 824 aa12.59□□□□□ -0.39
ARHGEF39-201ENST00000378387 CHMP4CQ96CF2 233 aa12.59□□□□□ -0.39
ARHGEF39-201ENST00000378387 ASXL1Q8IXJ9 1541 aa12.59□□□□□ -0.39
ARHGEF39-201ENST00000378387 GPATCH11Q8N954 259 aa12.59□□□□□ -0.39
ARHGEF39-201ENST00000378387 MAP4K4O95819 1239 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF39-201ENST00000378387 CT47B1P0C2W7 299 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF39-201ENST00000378387 ELF2Q15723 593 aa12.59□□□□□ -0.39
ARHGEF39-201ENST00000378387 ZMYM3Q14202 1370 aa12.59□□□□□ -0.39
ARHGEF39-201ENST00000378387 NCOA3Q9Y6Q9 1424 aa12.59□□□□□ -0.39
ARHGEF39-201ENST00000378387 TERF2Q15554 542 aa12.58□□□□□ -0.39
ARHGEF39-201ENST00000378387 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.58□□□□□ -0.39
ARHGEF39-201ENST00000378387 NSD3Q9BZ95 1437 aa12.58□□□□□ -0.4
ARHGEF39-201ENST00000378387 MCM2P49736 904 aa12.58□□□□□ -0.4
ARHGEF39-201ENST00000378387 CLEC17AQ6ZS10 378 aa12.58□□□□□ -0.4
ARHGEF39-201ENST00000378387 SMTNL1A8MU46 457 aa12.57□□□□□ -0.4
ARHGEF39-201ENST00000378387 ZBTB7BO15156 539 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF39-201ENST00000378387 POLR1AO95602 1720 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF39-201ENST00000378387 CLIP2Q9UDT6 1046 aa12.57□□□□□ -0.4
ARHGEF39-201ENST00000378387 NRBP1Q9UHY1 535 aa12.57□□□□□ -0.4
ARHGEF39-201ENST00000378387 ZNF608Q9ULD9 1512 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF39-201ENST00000378387 GPS2Q13227 327 aa12.57□□□□□ -0.4
ARHGEF39-201ENST00000378387 RSPH14Q9UHP6 348 aa12.57□□□□□ -0.4
ARHGEF39-201ENST00000378387 SPAG9O60271 1321 aaKnown RBP12.57□□□□□ -0.4
ARHGEF39-201ENST00000378387 FAM177A1Q8N128 213 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF39-201ENST00000378387 TNMDQ9H2S6 317 aa12.57□□□□□ -0.4
ARHGEF39-201ENST00000378387 CTNNA3Q9UI47 895 aa12.57□□□□□ -0.4
ARHGEF39-201ENST00000378387 ZNF215Q9UL58 517 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF39-201ENST00000378387 EXOC6BQ9Y2D4 811 aa12.57□□□□□ -0.4
ARHGEF39-201ENST00000378387 DIAPH1O60610 1272 aaKnown RBP12.56□□□□□ -0.4
ARHGEF39-201ENST00000378387 PRKAR2BP31323 418 aa12.56□□□□□ -0.4
ARHGEF39-201ENST00000378387 TWISTNBQ3B726 338 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF39-201ENST00000378387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.56□□□□□ -0.4
ARHGEF39-201ENST00000378387 API5Q9BZZ5 524 aaKnown RBP12.56□□□□□ -0.4
ARHGEF39-201ENST00000378387 HMMRO75330 724 aa12.56□□□□□ -0.4
ARHGEF39-201ENST00000378387 BRD1O95696 1058 aa12.56□□□□□ -0.4
ARHGEF39-201ENST00000378387 CEBPZQ03701 1054 aaKnown RBP12.56□□□□□ -0.4
ARHGEF39-201ENST00000378387 PLPPR3Q6T4P5 718 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms