RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ERC1Q8IUD2 1116 aa18.08■□□□□ 0.48
NPHP4-201ENST00000378156 WASLO00401 505 aaPredicted RBP18.08■□□□□ 0.48
NPHP4-201ENST00000378156 CAVIN1Q6NZI2 390 aaKnown RBP18.08■□□□□ 0.48
NPHP4-201ENST00000378156 AMOTL2Q9Y2J4 779 aa18.08■□□□□ 0.48
NPHP4-201ENST00000378156 FAM135AQ9P2D6 1515 aa18.08■□□□□ 0.48
NPHP4-201ENST00000378156 NASPP49321 788 aaPredicted RBP18.08■□□□□ 0.48
NPHP4-201ENST00000378156 A0A0U1RQG5 324 aaPredicted RBP18.07■□□□□ 0.48
NPHP4-201ENST00000378156 FAM177BA6PVY3 158 aa18.07■□□□□ 0.48
NPHP4-201ENST00000378156 NME9Q86XW9 330 aa18.07■□□□□ 0.48
NPHP4-201ENST00000378156 MAP7D2Q96T17 732 aa18.07■□□□□ 0.48
NPHP4-201ENST00000378156 ERICH2A1L162 156 aa18.07■□□□□ 0.48
NPHP4-201ENST00000378156 MTERF4Q7Z6M4 381 aaKnown RBP18.07■□□□□ 0.48
NPHP4-201ENST00000378156 DCTN1Q14203 1278 aa18.07■□□□□ 0.48
NPHP4-201ENST00000378156 MCM4P33991 863 aa18.06■□□□□ 0.48
NPHP4-201ENST00000378156 RNF214Q8ND24 703 aa18.06■□□□□ 0.48
NPHP4-201ENST00000378156 K7ELQ4 463 aaPredicted RBP18.06■□□□□ 0.48
NPHP4-201ENST00000378156 TRIM34Q9BYJ4 488 aa18.06■□□□□ 0.48
NPHP4-201ENST00000378156 TRIM27P14373 513 aa18.05■□□□□ 0.48
NPHP4-201ENST00000378156 FAM13BQ9NYF5 915 aa18.05■□□□□ 0.48
NPHP4-201ENST00000378156 PRPF40AO75400 957 aaKnown RBP18.05■□□□□ 0.48
NPHP4-201ENST00000378156 PZPP20742 1482 aa18.05■□□□□ 0.48
NPHP4-201ENST00000378156 GNAT3A8MTJ3 354 aa18.04■□□□□ 0.48
NPHP4-201ENST00000378156 RAD21O60216 631 aa18.04■□□□□ 0.48
NPHP4-201ENST00000378156 PSMA5P28066 241 aa18.04■□□□□ 0.48
NPHP4-201ENST00000378156 BICD2Q8TD16 824 aa18.04■□□□□ 0.48
NPHP4-201ENST00000378156 PLCH2O75038 1416 aa18.04■□□□□ 0.48
NPHP4-201ENST00000378156 BTBD11A6QL63 1104 aa18.04■□□□□ 0.48
NPHP4-201ENST00000378156 FBXW7Q969H0 707 aa18.04■□□□□ 0.48
NPHP4-201ENST00000378156 LRRCC1Q9C099 1032 aa18.04■□□□□ 0.48
NPHP4-201ENST00000378156 EMILIN1Q9Y6C2 1016 aa18.04■□□□□ 0.48
NPHP4-201ENST00000378156 TEX35Q5T0J7 233 aa18.03■□□□□ 0.48
NPHP4-201ENST00000378156 TPD52L1Q16890 204 aaPredicted RBP18.03■□□□□ 0.48
NPHP4-201ENST00000378156 DNAJC2Q99543 621 aaKnown RBP18.03■□□□□ 0.48
NPHP4-201ENST00000378156 PER1O15534 1290 aaPredicted RBP18.03■□□□□ 0.48
NPHP4-201ENST00000378156 KIAA0556O60303 1618 aa18.03■□□□□ 0.48
NPHP4-201ENST00000378156 HIP1O00291 1037 aa18.03■□□□□ 0.48
NPHP4-201ENST00000378156 DHX16O60231 1041 aaKnown RBP18.03■□□□□ 0.48
NPHP4-201ENST00000378156 MYL6BP14649 208 aa18.03■□□□□ 0.48
NPHP4-201ENST00000378156 TBC1D2BQ9UPU7 963 aa18.03■□□□□ 0.48
NPHP4-201ENST00000378156 MIS18AQ9NYP9 233 aa18.02■□□□□ 0.48
NPHP4-201ENST00000378156 PHF8Q9UPP1 1060 aa18.02■□□□□ 0.48
NPHP4-201ENST00000378156 SYCP2Q9BX26 1530 aa18.02■□□□□ 0.48
NPHP4-201ENST00000378156 CCDC27Q2M243 656 aa18.02■□□□□ 0.48
NPHP4-201ENST00000378156 PES1O00541 588 aaKnown RBP18.02■□□□□ 0.47
NPHP4-201ENST00000378156 MCM10Q7L590 875 aa18.02■□□□□ 0.47
NPHP4-201ENST00000378156 ITSN2Q9NZM3 1697 aa18.02■□□□□ 0.47
NPHP4-201ENST00000378156 ADAMTS12P58397 1594 aa18.01■□□□□ 0.47
NPHP4-201ENST00000378156 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.01■□□□□ 0.47
NPHP4-201ENST00000378156 NUTM2BA6NNL0 878 aaPredicted RBP18.01■□□□□ 0.47
NPHP4-201ENST00000378156 NUTM2EB1AL46 878 aaPredicted RBP18.01■□□□□ 0.47
NPHP4-201ENST00000378156 NUTM2AQ8IVF1 878 aaPredicted RBP18.01■□□□□ 0.47
NPHP4-201ENST00000378156 FOXO3O43524 673 aa18.01■□□□□ 0.47
NPHP4-201ENST00000378156 RPAP2Q8IXW5 612 aaPredicted RBP18.01■□□□□ 0.47
NPHP4-201ENST00000378156 ABCC11Q96J66 1382 aa18.01■□□□□ 0.47
NPHP4-201ENST00000378156 ZSCAN21Q9Y5A6 473 aaPredicted RBP18■□□□□ 0.47
NPHP4-201ENST00000378156 KDM5BQ9UGL1 1544 aa18■□□□□ 0.47
NPHP4-201ENST00000378156 SAFBQ15424 915 aaKnown RBP eCLIP18■□□□□ 0.47
NPHP4-201ENST00000378156 TSR1Q2NL82 804 aaKnown RBP18■□□□□ 0.47
NPHP4-201ENST00000378156 ALDH1L2Q3SY69 923 aa18■□□□□ 0.47
NPHP4-201ENST00000378156 CCDC70Q6NSX1 233 aa18■□□□□ 0.47
NPHP4-201ENST00000378156 TBC1D2Q9BYX2 928 aa18■□□□□ 0.47
NPHP4-201ENST00000378156 SRGAP3O43295 1099 aa18■□□□□ 0.47
NPHP4-201ENST00000378156 TPM1P09493 284 aa17.99■□□□□ 0.47
NPHP4-201ENST00000378156 MCM2P49736 904 aa17.99■□□□□ 0.47
NPHP4-201ENST00000378156 SIL1Q9H173 461 aa17.99■□□□□ 0.47
NPHP4-201ENST00000378156 CNNM1Q9NRU3 951 aa17.99■□□□□ 0.47
NPHP4-201ENST00000378156 FOSBP53539 338 aa17.98■□□□□ 0.47
NPHP4-201ENST00000378156 IFT57Q9NWB7 429 aa17.98■□□□□ 0.47
NPHP4-201ENST00000378156 PLEKHH1Q9ULM0 1364 aa17.98■□□□□ 0.47
NPHP4-201ENST00000378156 TEX14Q8IWB6 1497 aa17.98■□□□□ 0.47
NPHP4-201ENST00000378156 FBLN1P23142 703 aa17.98■□□□□ 0.47
NPHP4-201ENST00000378156 CCDC158Q5M9N0 1113 aa17.98■□□□□ 0.47
NPHP4-201ENST00000378156 PCDHB15Q9Y5E8 787 aa17.98■□□□□ 0.47
NPHP4-201ENST00000378156 ASXL2Q76L83 1435 aa17.98■□□□□ 0.47
NPHP4-201ENST00000378156 FYB1O15117 783 aa17.97■□□□□ 0.47
NPHP4-201ENST00000378156 ASXL1Q8IXJ9 1541 aa17.97■□□□□ 0.47
NPHP4-201ENST00000378156 NUP160Q12769 1436 aa17.97■□□□□ 0.47
NPHP4-201ENST00000378156 MAP4K4O95819 1239 aaPredicted RBP17.97■□□□□ 0.47
NPHP4-201ENST00000378156 EXOC6BQ9Y2D4 811 aa17.97■□□□□ 0.47
NPHP4-201ENST00000378156 IL1RAPL2Q9NP60 686 aa17.96■□□□□ 0.47
NPHP4-201ENST00000378156 CCAR2Q8N163 923 aaKnown RBP17.96■□□□□ 0.47
NPHP4-201ENST00000378156 GRPEL1Q9HAV7 217 aa17.96■□□□□ 0.47
NPHP4-201ENST00000378156 DUOX2Q9NRD8 1548 aa17.96■□□□□ 0.47
NPHP4-201ENST00000378156 SMARCA5O60264 1052 aaPredicted RBP17.96■□□□□ 0.47
NPHP4-201ENST00000378156 MBD3O95983 291 aa17.96■□□□□ 0.47
NPHP4-201ENST00000378156 CIZ1Q9ULV3 898 aaPredicted RBP17.96■□□□□ 0.47
NPHP4-201ENST00000378156 CCDC73Q6ZRK6 1079 aa17.96■□□□□ 0.46
NPHP4-201ENST00000378156 TRAPPC8Q9Y2L5 1435 aa17.95■□□□□ 0.46
NPHP4-201ENST00000378156 TAF7Q15545 349 aaPredicted RBP17.95■□□□□ 0.46
NPHP4-201ENST00000378156 DNMT1P26358 1616 aaKnown RBP17.95■□□□□ 0.46
NPHP4-201ENST00000378156 CWC22Q9HCG8 908 aaKnown RBP17.95■□□□□ 0.46
NPHP4-201ENST00000378156 NSD2O96028 1365 aa17.95■□□□□ 0.46
NPHP4-201ENST00000378156 CCDC57Q2TAC2 916 aa17.94■□□□□ 0.46
NPHP4-201ENST00000378156 HOOK1Q9UJC3 728 aaKnown RBP17.94■□□□□ 0.46
NPHP4-201ENST00000378156 CEP89Q96ST8 783 aa17.94■□□□□ 0.46
NPHP4-201ENST00000378156 TPM2P07951 284 aa17.94■□□□□ 0.46
NPHP4-201ENST00000378156 AMOTQ4VCS5 1084 aa17.94■□□□□ 0.46
NPHP4-201ENST00000378156 ZNF592Q92610 1267 aa17.94■□□□□ 0.46
NPHP4-201ENST00000378156 CARD14Q9BXL6 1004 aa17.94■□□□□ 0.46
NPHP4-201ENST00000378156 DISP1Q96F81 1524 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms