RNA–Protein interactions for RNA: ENST00000378126.4

PCDHA6-201, Transcript of protocadherin alpha 6, humanhuman

BASIC

Gene PCDHA6, Length 3,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-201ENST00000378126 ROBO2Q9HCK4 1378 aa17.48■□□□□ 0.39
PCDHA6-201ENST00000378126 PNPLA6Q8IY17 1366 aa17.48■□□□□ 0.39
PCDHA6-201ENST00000378126 CPS1P31327 1500 aa17.47■□□□□ 0.39
PCDHA6-201ENST00000378126 FOXO3O43524 673 aa17.47■□□□□ 0.39
PCDHA6-201ENST00000378126 LTV1Q96GA3 475 aaPredicted RBP17.47■□□□□ 0.39
PCDHA6-201ENST00000378126 BECN1Q14457 450 aa17.46■□□□□ 0.39
PCDHA6-201ENST00000378126 ADGRB2O60241 1585 aa17.46■□□□□ 0.39
PCDHA6-201ENST00000378126 TNRQ92752 1358 aa17.46■□□□□ 0.39
PCDHA6-201ENST00000378126 EIF4A2Q14240 407 aaKnown RBP17.46■□□□□ 0.39
PCDHA6-201ENST00000378126 NECTIN2Q92692 538 aa17.46■□□□□ 0.39
PCDHA6-201ENST00000378126 GNAI1P63096 354 aa17.46■□□□□ 0.39
PCDHA6-201ENST00000378126 CT47B1P0C2W7 299 aaPredicted RBP17.45■□□□□ 0.38
PCDHA6-201ENST00000378126 TBC1D2Q9BYX2 928 aa17.45■□□□□ 0.38
PCDHA6-201ENST00000378126 IL16Q14005 1332 aa17.45■□□□□ 0.38
PCDHA6-201ENST00000378126 MRPL50Q8N5N7 158 aaKnown RBP17.45■□□□□ 0.38
PCDHA6-201ENST00000378126 NGDNQ8NEJ9 315 aaKnown RBP17.45■□□□□ 0.38
PCDHA6-201ENST00000378126 HDGFP51858 240 aaKnown RBP17.44■□□□□ 0.38
PCDHA6-201ENST00000378126 FOXD4L1Q9NU39 408 aa17.44■□□□□ 0.38
PCDHA6-201ENST00000378126 USP35Q9P2H5 1018 aa17.44■□□□□ 0.38
PCDHA6-201ENST00000378126 FAM135BQ49AJ0 1406 aa17.44■□□□□ 0.38
PCDHA6-201ENST00000378126 TBC1D32Q96NH3 1257 aa17.44■□□□□ 0.38
PCDHA6-201ENST00000378126 C22orf23Q9BZE7 217 aa17.44■□□□□ 0.38
PCDHA6-201ENST00000378126 GSE1Q14687 1217 aa17.43■□□□□ 0.38
PCDHA6-201ENST00000378126 BRPF3Q9ULD4 1205 aa17.43■□□□□ 0.38
PCDHA6-201ENST00000378126 MAP2P11137 1827 aaKnown RBP17.43■□□□□ 0.38
PCDHA6-201ENST00000378126 EDC4Q6P2E9 1401 aaKnown RBP17.43■□□□□ 0.38
PCDHA6-201ENST00000378126 TTC21BQ7Z4L5 1316 aa17.42■□□□□ 0.38
PCDHA6-201ENST00000378126 AMOTL2Q9Y2J4 779 aa17.42■□□□□ 0.38
PCDHA6-201ENST00000378126 HDAC1Q13547 482 aaPredicted RBP17.41■□□□□ 0.38
PCDHA6-201ENST00000378126 CHD1LQ86WJ1 897 aa17.41■□□□□ 0.38
PCDHA6-201ENST00000378126 PPP6R1Q9UPN7 881 aa17.41■□□□□ 0.38
PCDHA6-201ENST00000378126 SLC4A10Q6U841 1118 aa17.41■□□□□ 0.38
PCDHA6-201ENST00000378126 ZBTB7BO15156 539 aaPredicted RBP17.4■□□□□ 0.38
PCDHA6-201ENST00000378126 ALDH1L2Q3SY69 923 aa17.4■□□□□ 0.38
PCDHA6-201ENST00000378126 IFT57Q9NWB7 429 aa17.4■□□□□ 0.38
PCDHA6-201ENST00000378126 AAMPQ13685 434 aa17.4■□□□□ 0.38
PCDHA6-201ENST00000378126 SMC5Q8IY18 1101 aa17.4■□□□□ 0.38
PCDHA6-201ENST00000378126 CFAP44Q96MT7 982 aa17.4■□□□□ 0.38
PCDHA6-201ENST00000378126 CPSF1Q10570 1443 aaKnown RBP17.4■□□□□ 0.38
PCDHA6-201ENST00000378126 ATP7BP35670 1465 aa17.4■□□□□ 0.38
PCDHA6-201ENST00000378126 TMEM2Q9UHN6 1383 aa17.39■□□□□ 0.37
PCDHA6-201ENST00000378126 GZF1Q9H116 711 aaPredicted RBP17.39■□□□□ 0.37
PCDHA6-201ENST00000378126 AMPHP49418 695 aa17.38■□□□□ 0.37
PCDHA6-201ENST00000378126 CALD1Q05682 793 aaKnown RBP17.38■□□□□ 0.37
PCDHA6-201ENST00000378126 SIRT2Q8IXJ6 389 aa17.38■□□□□ 0.37
PCDHA6-201ENST00000378126 EID1Q9Y6B2 187 aa17.38■□□□□ 0.37
PCDHA6-201ENST00000378126 MED14O60244 1454 aa17.38■□□□□ 0.37
PCDHA6-201ENST00000378126 KIF20BQ96Q89 1820 aa17.38■□□□□ 0.37
PCDHA6-201ENST00000378126 TRHP20396 242 aaPredicted RBP17.38■□□□□ 0.37
PCDHA6-201ENST00000378126 SPATA31D1Q6ZQQ2 1576 aa17.37■□□□□ 0.37
PCDHA6-201ENST00000378126 NUCB1Q02818 461 aa17.37■□□□□ 0.37
PCDHA6-201ENST00000378126 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
PCDHA6-201ENST00000378126 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
PCDHA6-201ENST00000378126 F6X3S4 739 aa17.37■□□□□ 0.37
PCDHA6-201ENST00000378126 USHBP1Q8N6Y0 703 aa17.36■□□□□ 0.37
PCDHA6-201ENST00000378126 SMARCA5O60264 1052 aaPredicted RBP17.36■□□□□ 0.37
PCDHA6-201ENST00000378126 NLRP6P59044 892 aa17.35■□□□□ 0.37
PCDHA6-201ENST00000378126 LMOD3Q0VAK6 560 aa17.35■□□□□ 0.37
PCDHA6-201ENST00000378126 MAP3K19Q56UN5 1328 aa17.35■□□□□ 0.37
PCDHA6-201ENST00000378126 ZNF853P0CG23 659 aa17.34■□□□□ 0.37
PCDHA6-201ENST00000378126 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
PCDHA6-201ENST00000378126 OTUD7AQ8TE49 926 aaPredicted RBP17.34■□□□□ 0.37
PCDHA6-201ENST00000378126 SLC4A2P04920 1241 aa17.34■□□□□ 0.37
PCDHA6-201ENST00000378126 RBM42Q9BTD8 480 aaKnown RBP17.34■□□□□ 0.37
PCDHA6-201ENST00000378126 AGLP35573 1532 aa17.33■□□□□ 0.37
PCDHA6-201ENST00000378126 NRXN3Q9Y4C0 1643 aa17.33■□□□□ 0.37
PCDHA6-201ENST00000378126 ANKRD26Q9UPS8 1709 aa17.33■□□□□ 0.36
PCDHA6-201ENST00000378126 MTHFSDQ2M296 383 aaKnown RBP17.32■□□□□ 0.36
PCDHA6-201ENST00000378126 RTF1Q92541 710 aaKnown RBP17.32■□□□□ 0.36
PCDHA6-201ENST00000378126 G2E3Q7L622 706 aa17.32■□□□□ 0.36
PCDHA6-201ENST00000378126 TSPYL4Q9UJ04 414 aa17.32■□□□□ 0.36
PCDHA6-201ENST00000378126 MEIS3Q99687 375 aa17.31■□□□□ 0.36
PCDHA6-201ENST00000378126 DLC1Q96QB1 1528 aa17.31■□□□□ 0.36
PCDHA6-201ENST00000378126 ADAMTS13Q76LX8 1427 aa17.31■□□□□ 0.36
PCDHA6-201ENST00000378126 HSP90AA1P07900 732 aaKnown RBP17.31■□□□□ 0.36
PCDHA6-201ENST00000378126 ZNF428Q96B54 188 aa17.31■□□□□ 0.36
PCDHA6-201ENST00000378126 API5Q9BZZ5 524 aaKnown RBP17.31■□□□□ 0.36
PCDHA6-201ENST00000378126 CDK12Q9NYV4 1490 aaPredicted RBP17.3■□□□□ 0.36
PCDHA6-201ENST00000378126 HSCBQ8IWL3 235 aa17.3■□□□□ 0.36
PCDHA6-201ENST00000378126 XPCQ01831 940 aaPredicted RBP17.3■□□□□ 0.36
PCDHA6-201ENST00000378126 LMOD2Q6P5Q4 547 aa17.3■□□□□ 0.36
PCDHA6-201ENST00000378126 KCNA6P17658 529 aa17.29■□□□□ 0.36
PCDHA6-201ENST00000378126 PTPRUQ92729 1446 aa17.29■□□□□ 0.36
PCDHA6-201ENST00000378126 TSHZ3Q63HK5 1081 aa17.29■□□□□ 0.36
PCDHA6-201ENST00000378126 EYA1Q99502 592 aa17.29■□□□□ 0.36
PCDHA6-201ENST00000378126 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.29■□□□□ 0.36
PCDHA6-201ENST00000378126 AATKQ6ZMQ8 1374 aa17.28■□□□□ 0.36
PCDHA6-201ENST00000378126 TBC1D9Q6ZT07 1266 aa17.28■□□□□ 0.36
PCDHA6-201ENST00000378126 ABTB2Q8N961 1025 aa17.28■□□□□ 0.36
PCDHA6-201ENST00000378126 ANTXR1Q9H6X2 564 aa17.28■□□□□ 0.36
PCDHA6-201ENST00000378126 ABCC4O15439 1325 aa17.28■□□□□ 0.36
PCDHA6-201ENST00000378126 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
PCDHA6-201ENST00000378126 SETD1AO15047 1707 aaKnown RBP17.28■□□□□ 0.36
PCDHA6-201ENST00000378126 HSP90AB1P08238 724 aaKnown RBP17.27■□□□□ 0.36
PCDHA6-201ENST00000378126 CD2BP2O95400 341 aaKnown RBP17.27■□□□□ 0.35
PCDHA6-201ENST00000378126 USP6P35125 1406 aa17.26■□□□□ 0.35
PCDHA6-201ENST00000378126 GCC1Q96CN9 775 aa17.25■□□□□ 0.35
PCDHA6-201ENST00000378126 MSH6P52701 1360 aa17.25■□□□□ 0.35
PCDHA6-201ENST00000378126 PLEKHG3A1L390 1219 aa17.25■□□□□ 0.35
PCDHA6-201ENST00000378126 CHL1O00533 1208 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms