RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 SETD1AO15047 1707 aaKnown RBP17.35■□□□□ 0.37
SF1-205ENST00000377394 RIMBP3CA6NJZ7 1639 aa17.34■□□□□ 0.37
SF1-205ENST00000377394 RIMBP3BA6NNM3 1639 aa17.34■□□□□ 0.37
SF1-205ENST00000377394 RIMBP3Q9UFD9 1639 aa17.34■□□□□ 0.37
SF1-205ENST00000377394 CPSF1Q10570 1443 aaKnown RBP17.33■□□□□ 0.37
SF1-205ENST00000377394 VAMP4O75379 141 aa17.33■□□□□ 0.36
SF1-205ENST00000377394 HMOX1P09601 288 aa17.33■□□□□ 0.36
SF1-205ENST00000377394 RIMS2Q9UQ26 1411 aa17.32■□□□□ 0.36
SF1-205ENST00000377394 MAP2P11137 1827 aaKnown RBP17.32■□□□□ 0.36
SF1-205ENST00000377394 IL13P35225 146 aa17.32■□□□□ 0.36
SF1-205ENST00000377394 MRPL50Q8N5N7 158 aaKnown RBP17.32■□□□□ 0.36
SF1-205ENST00000377394 THUMPD2Q9BTF0 503 aaKnown RBP17.32■□□□□ 0.36
SF1-205ENST00000377394 EMILIN1Q9Y6C2 1016 aa17.32■□□□□ 0.36
SF1-205ENST00000377394 PIK3R4Q99570 1358 aa17.32■□□□□ 0.36
SF1-205ENST00000377394 ZBTB7BO15156 539 aaPredicted RBP17.32■□□□□ 0.36
SF1-205ENST00000377394 ZNF853P0CG23 659 aa17.31■□□□□ 0.36
SF1-205ENST00000377394 CHD1LQ86WJ1 897 aa17.31■□□□□ 0.36
SF1-205ENST00000377394 TSPYL6Q8N831 410 aa17.31■□□□□ 0.36
SF1-205ENST00000377394 LNPKQ9C0E8 428 aa17.31■□□□□ 0.36
SF1-205ENST00000377394 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
SF1-205ENST00000377394 PTCH1Q13635 1447 aa17.31■□□□□ 0.36
SF1-205ENST00000377394 ARHGAP45Q92619 1136 aa17.3■□□□□ 0.36
SF1-205ENST00000377394 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
SF1-205ENST00000377394 SPATA31D1Q6ZQQ2 1576 aa17.3■□□□□ 0.36
SF1-205ENST00000377394 REREQ9P2R6 1566 aa17.3■□□□□ 0.36
SF1-205ENST00000377394 AGLP35573 1532 aa17.3■□□□□ 0.36
SF1-205ENST00000377394 IFT57Q9NWB7 429 aa17.3■□□□□ 0.36
SF1-205ENST00000377394 NME9Q86XW9 330 aa17.3■□□□□ 0.36
SF1-205ENST00000377394 CDK12Q9NYV4 1490 aaPredicted RBP17.29■□□□□ 0.36
SF1-205ENST00000377394 CALD1Q05682 793 aaKnown RBP17.29■□□□□ 0.36
SF1-205ENST00000377394 PDCL3Q9H2J4 239 aa17.29■□□□□ 0.36
SF1-205ENST00000377394 WASLO00401 505 aaPredicted RBP17.29■□□□□ 0.36
SF1-205ENST00000377394 GNAI1P63096 354 aa17.29■□□□□ 0.36
SF1-205ENST00000377394 ZRANB1Q9UGI0 708 aa17.29■□□□□ 0.36
SF1-205ENST00000377394 AATKQ6ZMQ8 1374 aa17.28■□□□□ 0.36
SF1-205ENST00000377394 RBM25P49756 843 aaKnown RBP17.28■□□□□ 0.36
SF1-205ENST00000377394 MBIPQ9NS73 344 aa17.28■□□□□ 0.36
SF1-205ENST00000377394 GAS2L3Q86XJ1 694 aa17.28■□□□□ 0.36
SF1-205ENST00000377394 TRIM44Q96DX7 344 aaPredicted RBP17.28■□□□□ 0.36
SF1-205ENST00000377394 NRXN3Q9Y4C0 1643 aa17.27■□□□□ 0.36
SF1-205ENST00000377394 KIAA1211Q6ZU35 1233 aa17.27■□□□□ 0.36
SF1-205ENST00000377394 CHMP5Q9NZZ3 219 aa17.27■□□□□ 0.36
SF1-205ENST00000377394 ABCC4O15439 1325 aa17.27■□□□□ 0.35
SF1-205ENST00000377394 RBM10P98175 930 aaKnown RBP17.26■□□□□ 0.35
SF1-205ENST00000377394 BMP2KLQ5H9B9 411 aa17.26■□□□□ 0.35
SF1-205ENST00000377394 TPM2P07951 284 aa17.26■□□□□ 0.35
SF1-205ENST00000377394 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
SF1-205ENST00000377394 GCC1Q96CN9 775 aa17.26■□□□□ 0.35
SF1-205ENST00000377394 C1orf115Q9H7X2 142 aa17.26■□□□□ 0.35
SF1-205ENST00000377394 METP08581 1390 aa17.26■□□□□ 0.35
SF1-205ENST00000377394 FAM69CQ0P6D2 419 aa17.25■□□□□ 0.35
SF1-205ENST00000377394 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
SF1-205ENST00000377394 CHMP4BQ9H444 224 aaKnown RBP17.25■□□□□ 0.35
SF1-205ENST00000377394 PRDM4Q9UKN5 801 aa17.25■□□□□ 0.35
SF1-205ENST00000377394 NCOA3Q9Y6Q9 1424 aa17.25■□□□□ 0.35
SF1-205ENST00000377394 CPS1P31327 1500 aa17.25■□□□□ 0.35
SF1-205ENST00000377394 ELL2O00472 640 aaPredicted RBP17.25■□□□□ 0.35
SF1-205ENST00000377394 ANKRD45Q5TZF3 282 aa17.24■□□□□ 0.35
SF1-205ENST00000377394 CFAP44Q96MT7 982 aa17.24■□□□□ 0.35
SF1-205ENST00000377394 CYB5RLQ6IPT4 315 aa17.24■□□□□ 0.35
SF1-205ENST00000377394 HSCBQ8IWL3 235 aa17.24■□□□□ 0.35
SF1-205ENST00000377394 C8orf58Q8NAV2 365 aa17.24■□□□□ 0.35
SF1-205ENST00000377394 NUDT16Q96DE0 195 aaKnown RBP17.24■□□□□ 0.35
SF1-205ENST00000377394 NCKAP5LQ9HCH0 1330 aa17.24■□□□□ 0.35
SF1-205ENST00000377394 DDIT3P35638 169 aa17.23■□□□□ 0.35
SF1-205ENST00000377394 TWISTNBQ3B726 338 aaPredicted RBP17.23■□□□□ 0.35
SF1-205ENST00000377394 SNX21Q969T3 373 aa17.23■□□□□ 0.35
SF1-205ENST00000377394 A0A0U1RQG5 324 aaPredicted RBP17.23■□□□□ 0.35
SF1-205ENST00000377394 DIP2BQ9P265 1576 aa17.23■□□□□ 0.35
SF1-205ENST00000377394 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
SF1-205ENST00000377394 TXNDC2Q86VQ3 553 aa17.22■□□□□ 0.35
SF1-205ENST00000377394 COG3Q96JB2 828 aa17.22■□□□□ 0.35
SF1-205ENST00000377394 MON2Q7Z3U7 1717 aa17.22■□□□□ 0.35
SF1-205ENST00000377394 DLG5Q8TDM6 1919 aa17.22■□□□□ 0.35
SF1-205ENST00000377394 LMOD3Q0VAK6 560 aa17.22■□□□□ 0.35
SF1-205ENST00000377394 FAM83GA6ND36 823 aa17.21■□□□□ 0.35
SF1-205ENST00000377394 CCDC61Q9Y6R9 512 aa17.21■□□□□ 0.35
SF1-205ENST00000377394 KIF2CQ99661 725 aa17.21■□□□□ 0.35
SF1-205ENST00000377394 SIRT1Q96EB6 747 aa17.2■□□□□ 0.34
SF1-205ENST00000377394 TECPR2O15040 1411 aa17.2■□□□□ 0.34
SF1-205ENST00000377394 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.19■□□□□ 0.34
SF1-205ENST00000377394 C3P01024 1663 aa17.19■□□□□ 0.34
SF1-205ENST00000377394 MLECQ14165 292 aa17.19■□□□□ 0.34
SF1-205ENST00000377394 API5Q9BZZ5 524 aaKnown RBP17.19■□□□□ 0.34
SF1-205ENST00000377394 DCTN1Q14203 1278 aa17.18■□□□□ 0.34
SF1-205ENST00000377394 KNDC1Q76NI1 1749 aa17.18■□□□□ 0.34
SF1-205ENST00000377394 TBC1D9Q6ZT07 1266 aa17.18■□□□□ 0.34
SF1-205ENST00000377394 AKAP12Q02952 1782 aa17.18■□□□□ 0.34
SF1-205ENST00000377394 ARID3AQ99856 593 aa17.18■□□□□ 0.34
SF1-205ENST00000377394 TSPOAP1O95153 1857 aa17.17■□□□□ 0.34
SF1-205ENST00000377394 KIF24Q5T7B8 1368 aa17.17■□□□□ 0.34
SF1-205ENST00000377394 PRR36Q9H6K5 1346 aa17.17■□□□□ 0.34
SF1-205ENST00000377394 DDX11L8A8MPP1 907 aa17.17■□□□□ 0.34
SF1-205ENST00000377394 FAM13BQ9NYF5 915 aa17.16■□□□□ 0.34
SF1-205ENST00000377394 NRKQ7Z2Y5 1582 aa17.16■□□□□ 0.34
SF1-205ENST00000377394 AEBP1Q8IUX7 1158 aa17.14■□□□□ 0.34
SF1-205ENST00000377394 TNPO1Q92973 898 aaKnown RBP17.14■□□□□ 0.33
SF1-205ENST00000377394 ITSN1Q15811 1721 aa17.14■□□□□ 0.33
SF1-205ENST00000377394 CD2BP2O95400 341 aaKnown RBP17.14■□□□□ 0.33
SF1-205ENST00000377394 EIF4A2Q14240 407 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms