RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 LTKP29376 864 aa18.41■□□□□ 0.54
ZKSCAN4-201ENST00000377294 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.41■□□□□ 0.54
ZKSCAN4-201ENST00000377294 SLC26A8Q96RN1 970 aa18.41■□□□□ 0.54
ZKSCAN4-201ENST00000377294 KIF16BQ96L93 1317 aa18.41■□□□□ 0.54
ZKSCAN4-201ENST00000377294 MON2Q7Z3U7 1717 aa18.4■□□□□ 0.54
ZKSCAN4-201ENST00000377294 SPRYD3Q8NCJ5 442 aa18.4■□□□□ 0.54
ZKSCAN4-201ENST00000377294 HDAC1Q13547 482 aaPredicted RBP18.4■□□□□ 0.54
ZKSCAN4-201ENST00000377294 C8orf58Q8NAV2 365 aa18.4■□□□□ 0.54
ZKSCAN4-201ENST00000377294 CDK12Q9NYV4 1490 aaPredicted RBP18.39■□□□□ 0.54
ZKSCAN4-201ENST00000377294 MFAP1P55081 439 aaKnown RBP18.39■□□□□ 0.53
ZKSCAN4-201ENST00000377294 TBC1D32Q96NH3 1257 aa18.39■□□□□ 0.53
ZKSCAN4-201ENST00000377294 LNPKQ9C0E8 428 aa18.39■□□□□ 0.53
ZKSCAN4-201ENST00000377294 KRT24Q2M2I5 525 aa18.39■□□□□ 0.53
ZKSCAN4-201ENST00000377294 MRPL50Q8N5N7 158 aaKnown RBP18.39■□□□□ 0.53
ZKSCAN4-201ENST00000377294 TMEM2Q9UHN6 1383 aa18.38■□□□□ 0.53
ZKSCAN4-201ENST00000377294 C3P01024 1663 aa18.38■□□□□ 0.53
ZKSCAN4-201ENST00000377294 ITSN1Q15811 1721 aa18.38■□□□□ 0.53
ZKSCAN4-201ENST00000377294 UBR1Q8IWV7 1749 aa18.38■□□□□ 0.53
ZKSCAN4-201ENST00000377294 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.38■□□□□ 0.53
ZKSCAN4-201ENST00000377294 ALDH1L2Q3SY69 923 aa18.38■□□□□ 0.53
ZKSCAN4-201ENST00000377294 AKAP12Q02952 1782 aa18.37■□□□□ 0.53
ZKSCAN4-201ENST00000377294 IPO8O15397 1037 aaKnown RBP18.37■□□□□ 0.53
ZKSCAN4-201ENST00000377294 ADAMTS13Q76LX8 1427 aa18.37■□□□□ 0.53
ZKSCAN4-201ENST00000377294 SMC5Q8IY18 1101 aa18.37■□□□□ 0.53
ZKSCAN4-201ENST00000377294 KNDC1Q76NI1 1749 aa18.36■□□□□ 0.53
ZKSCAN4-201ENST00000377294 ACEP12821 1306 aa18.36■□□□□ 0.53
ZKSCAN4-201ENST00000377294 EIF4A2Q14240 407 aaKnown RBP18.35■□□□□ 0.53
ZKSCAN4-201ENST00000377294 TWISTNBQ3B726 338 aaPredicted RBP18.35■□□□□ 0.53
ZKSCAN4-201ENST00000377294 SULT6B1Q6IMI4 303 aa18.35■□□□□ 0.53
ZKSCAN4-201ENST00000377294 ZNF853P0CG23 659 aa18.35■□□□□ 0.53
ZKSCAN4-201ENST00000377294 TBC1D2Q9BYX2 928 aa18.35■□□□□ 0.53
ZKSCAN4-201ENST00000377294 IFT57Q9NWB7 429 aa18.35■□□□□ 0.53
ZKSCAN4-201ENST00000377294 AATKQ6ZMQ8 1374 aa18.35■□□□□ 0.53
ZKSCAN4-201ENST00000377294 TECPR2O15040 1411 aa18.35■□□□□ 0.53
ZKSCAN4-201ENST00000377294 GNAI1P63096 354 aa18.34■□□□□ 0.53
ZKSCAN4-201ENST00000377294 UPF2Q9HAU5 1272 aaKnown RBP18.34■□□□□ 0.53
ZKSCAN4-201ENST00000377294 TTC21BQ7Z4L5 1316 aa18.34■□□□□ 0.53
ZKSCAN4-201ENST00000377294 HSP90AB2PQ58FF8 381 aa18.34■□□□□ 0.53
ZKSCAN4-201ENST00000377294 ZBTB7BO15156 539 aaPredicted RBP18.33■□□□□ 0.53
ZKSCAN4-201ENST00000377294 MCM10Q7L590 875 aa18.33■□□□□ 0.53
ZKSCAN4-201ENST00000377294 IL27Q8NEV9 243 aa18.33■□□□□ 0.53
ZKSCAN4-201ENST00000377294 PTPRUQ92729 1446 aa18.32■□□□□ 0.52
ZKSCAN4-201ENST00000377294 NUCB1Q02818 461 aa18.32■□□□□ 0.52
ZKSCAN4-201ENST00000377294 GSE1Q14687 1217 aa18.32■□□□□ 0.52
ZKSCAN4-201ENST00000377294 BECN1Q14457 450 aa18.31■□□□□ 0.52
ZKSCAN4-201ENST00000377294 SIRT2Q8IXJ6 389 aa18.31■□□□□ 0.52
ZKSCAN4-201ENST00000377294 CFAP44Q96MT7 982 aa18.31■□□□□ 0.52
ZKSCAN4-201ENST00000377294 PEAK1Q9H792 1746 aa18.31■□□□□ 0.52
ZKSCAN4-201ENST00000377294 C22orf23Q9BZE7 217 aa18.31■□□□□ 0.52
ZKSCAN4-201ENST00000377294 ANKRD45Q5TZF3 282 aa18.3■□□□□ 0.52
ZKSCAN4-201ENST00000377294 PTCH1Q13635 1447 aa18.3■□□□□ 0.52
ZKSCAN4-201ENST00000377294 HDGFP51858 240 aaKnown RBP18.3■□□□□ 0.52
ZKSCAN4-201ENST00000377294 CHD1LQ86WJ1 897 aa18.3■□□□□ 0.52
ZKSCAN4-201ENST00000377294 MIS18AQ9NYP9 233 aa18.3■□□□□ 0.52
ZKSCAN4-201ENST00000377294 NRKQ7Z2Y5 1582 aa18.29■□□□□ 0.52
ZKSCAN4-201ENST00000377294 RIMS1Q86UR5 1692 aaKnown RBP18.29■□□□□ 0.52
ZKSCAN4-201ENST00000377294 ZNF692Q9BU19 519 aaPredicted RBP18.28■□□□□ 0.52
ZKSCAN4-201ENST00000377294 RTN4Q9NQC3 1192 aaKnown RBP18.28■□□□□ 0.52
ZKSCAN4-201ENST00000377294 FOXO3O43524 673 aa18.28■□□□□ 0.52
ZKSCAN4-201ENST00000377294 CALD1Q05682 793 aaKnown RBP18.28■□□□□ 0.52
ZKSCAN4-201ENST00000377294 ANTXR1Q9H6X2 564 aa18.28■□□□□ 0.52
ZKSCAN4-201ENST00000377294 BRPF1P55201 1214 aaPredicted RBP18.27■□□□□ 0.52
ZKSCAN4-201ENST00000377294 SIRT1Q96EB6 747 aa18.27■□□□□ 0.52
ZKSCAN4-201ENST00000377294 ABCC4O15439 1325 aa18.27■□□□□ 0.52
ZKSCAN4-201ENST00000377294 OVOS2A0A0J9YW53 1432 aa18.27■□□□□ 0.51
ZKSCAN4-201ENST00000377294 OVOS2Q6IE36 1432 aa18.27■□□□□ 0.51
ZKSCAN4-201ENST00000377294 USP6P35125 1406 aa18.26■□□□□ 0.51
ZKSCAN4-201ENST00000377294 TOPAZ1Q8N9V7 1692 aa18.26■□□□□ 0.51
ZKSCAN4-201ENST00000377294 AMOTL2Q9Y2J4 779 aa18.26■□□□□ 0.51
ZKSCAN4-201ENST00000377294 NUTM2GQ5VZR2 741 aa18.25■□□□□ 0.51
ZKSCAN4-201ENST00000377294 BRPF3Q9ULD4 1205 aa18.25■□□□□ 0.51
ZKSCAN4-201ENST00000377294 PIK3R4Q99570 1358 aa18.25■□□□□ 0.51
ZKSCAN4-201ENST00000377294 LMOD3Q0VAK6 560 aa18.25■□□□□ 0.51
ZKSCAN4-201ENST00000377294 PLEKHG1Q9ULL1 1385 aa18.24■□□□□ 0.51
ZKSCAN4-201ENST00000377294 RGPD8O14715 1765 aaPredicted RBP18.24■□□□□ 0.51
ZKSCAN4-201ENST00000377294 ZNF428Q96B54 188 aa18.24■□□□□ 0.51
ZKSCAN4-201ENST00000377294 ARHGAP45Q92619 1136 aa18.23■□□□□ 0.51
ZKSCAN4-201ENST00000377294 PLEKHG3A1L390 1219 aa18.23■□□□□ 0.51
ZKSCAN4-201ENST00000377294 MAP3K19Q56UN5 1328 aa18.23■□□□□ 0.51
ZKSCAN4-201ENST00000377294 APBB1O00213 710 aa18.2■□□□□ 0.5
ZKSCAN4-201ENST00000377294 MTHFSDQ2M296 383 aaKnown RBP18.19■□□□□ 0.5
ZKSCAN4-201ENST00000377294 C16orf71Q8IYS4 520 aaPredicted RBP18.19■□□□□ 0.5
ZKSCAN4-201ENST00000377294 NGDNQ8NEJ9 315 aaKnown RBP18.19■□□□□ 0.5
ZKSCAN4-201ENST00000377294 RBM33Q96EV2 1170 aaKnown RBP18.19■□□□□ 0.5
ZKSCAN4-201ENST00000377294 NALCNQ8IZF0 1738 aa18.19■□□□□ 0.5
ZKSCAN4-201ENST00000377294 RGS12O14924 1447 aa18.19■□□□□ 0.5
ZKSCAN4-201ENST00000377294 EID1Q9Y6B2 187 aa18.19■□□□□ 0.5
ZKSCAN4-201ENST00000377294 CHL1O00533 1208 aa18.18■□□□□ 0.5
ZKSCAN4-201ENST00000377294 API5Q9BZZ5 524 aaKnown RBP18.18■□□□□ 0.5
ZKSCAN4-201ENST00000377294 GCC1Q96CN9 775 aa18.18■□□□□ 0.5
ZKSCAN4-201ENST00000377294 RGPD1P0DJD0 1748 aa18.18■□□□□ 0.5
ZKSCAN4-201ENST00000377294 MSH6P52701 1360 aa18.17■□□□□ 0.5
ZKSCAN4-201ENST00000377294 OTUD7AQ8TE49 926 aaPredicted RBP18.17■□□□□ 0.5
ZKSCAN4-201ENST00000377294 SSH2Q76I76 1423 aa18.17■□□□□ 0.5
ZKSCAN4-201ENST00000377294 G2E3Q7L622 706 aa18.17■□□□□ 0.5
ZKSCAN4-201ENST00000377294 CEP170BQ9Y4F5 1589 aaPredicted RBP18.17■□□□□ 0.5
ZKSCAN4-201ENST00000377294 USP31Q70CQ4 1352 aa18.16■□□□□ 0.5
ZKSCAN4-201ENST00000377294 BMP2KLQ5H9B9 411 aa18.16■□□□□ 0.5
ZKSCAN4-201ENST00000377294 TBC1D9Q6ZT07 1266 aa18.16■□□□□ 0.5
ZKSCAN4-201ENST00000377294 CRB1P82279 1406 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms