RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 SULT6B1Q6IMI4 303 aa16.8■□□□□ 0.28
TRIM40-206ENST00000376724 AEBP1Q8IUX7 1158 aa16.8■□□□□ 0.28
TRIM40-206ENST00000376724 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.8■□□□□ 0.28
TRIM40-206ENST00000376724 TSR2Q969E8 191 aaKnown RBP16.8■□□□□ 0.28
TRIM40-206ENST00000376724 TMEM94Q12767 1356 aa16.8■□□□□ 0.28
TRIM40-206ENST00000376724 PLEKHG5O94827 1062 aa16.79■□□□□ 0.28
TRIM40-206ENST00000376724 NFE2L2Q16236 605 aa16.79■□□□□ 0.28
TRIM40-206ENST00000376724 CRBNQ96SW2 442 aa16.79■□□□□ 0.28
TRIM40-206ENST00000376724 SBNO1A3KN83 1393 aa16.79■□□□□ 0.28
TRIM40-206ENST00000376724 ATF3P18847 181 aa16.78■□□□□ 0.28
TRIM40-206ENST00000376724 FLT4P35916 1363 aa16.78■□□□□ 0.28
TRIM40-206ENST00000376724 STRCP1A6NGW2 1772 aa16.78■□□□□ 0.28
TRIM40-206ENST00000376724 LMTK3Q96Q04 1460 aa16.77■□□□□ 0.28
TRIM40-206ENST00000376724 LMOD2Q6P5Q4 547 aa16.77■□□□□ 0.27
TRIM40-206ENST00000376724 FANCIQ9NVI1 1328 aa16.76■□□□□ 0.27
TRIM40-206ENST00000376724 LAS1LQ9Y4W2 734 aaKnown RBP16.76■□□□□ 0.27
TRIM40-206ENST00000376724 C1orf167Q5SNV9 1468 aa16.76■□□□□ 0.27
TRIM40-206ENST00000376724 THUMPD2Q9BTF0 503 aaKnown RBP16.75■□□□□ 0.27
TRIM40-206ENST00000376724 MARF1Q9Y4F3 1742 aaKnown RBP16.75■□□□□ 0.27
TRIM40-206ENST00000376724 ZBTB7CA1YPR0 619 aa16.75■□□□□ 0.27
TRIM40-206ENST00000376724 CANXP27824 592 aaKnown RBP16.74■□□□□ 0.27
TRIM40-206ENST00000376724 HOXC9P31274 260 aa16.74■□□□□ 0.27
TRIM40-206ENST00000376724 IL16Q14005 1332 aa16.74■□□□□ 0.27
TRIM40-206ENST00000376724 RARSP54136 660 aaKnown RBP16.74■□□□□ 0.27
TRIM40-206ENST00000376724 EXOSC9Q06265 439 aaKnown RBP16.74■□□□□ 0.27
TRIM40-206ENST00000376724 KRT28Q7Z3Y7 464 aa16.74■□□□□ 0.27
TRIM40-206ENST00000376724 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
TRIM40-206ENST00000376724 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
TRIM40-206ENST00000376724 FRAT1Q92837 279 aaPredicted RBP16.73■□□□□ 0.27
TRIM40-206ENST00000376724 FAM83GA6ND36 823 aa16.72■□□□□ 0.27
TRIM40-206ENST00000376724 EYA1Q99502 592 aa16.72■□□□□ 0.27
TRIM40-206ENST00000376724 USP54Q70EL1 1684 aa16.71■□□□□ 0.27
TRIM40-206ENST00000376724 DDX17Q92841 729 aaKnown RBP16.71■□□□□ 0.27
TRIM40-206ENST00000376724 ANP32EQ9BTT0 268 aa16.71■□□□□ 0.27
TRIM40-206ENST00000376724 TSHZ2Q9NRE2 1034 aa16.71■□□□□ 0.27
TRIM40-206ENST00000376724 STRCQ7RTU9 1775 aa16.71■□□□□ 0.27
TRIM40-206ENST00000376724 DCTN1Q14203 1278 aa16.7■□□□□ 0.26
TRIM40-206ENST00000376724 ARHGEF10O15013 1369 aa16.7■□□□□ 0.26
TRIM40-206ENST00000376724 MST1RQ04912 1400 aa16.7■□□□□ 0.26
TRIM40-206ENST00000376724 RGPD1P0DJD0 1748 aa16.7■□□□□ 0.26
TRIM40-206ENST00000376724 LMOD3Q0VAK6 560 aa16.7■□□□□ 0.26
TRIM40-206ENST00000376724 CADPS2Q86UW7 1296 aa16.7■□□□□ 0.26
TRIM40-206ENST00000376724 CALD1Q05682 793 aaKnown RBP16.69■□□□□ 0.26
TRIM40-206ENST00000376724 KCNH5Q8NCM2 988 aa16.69■□□□□ 0.26
TRIM40-206ENST00000376724 NCOA3Q9Y6Q9 1424 aa16.69■□□□□ 0.26
TRIM40-206ENST00000376724 MSH6P52701 1360 aa16.69■□□□□ 0.26
TRIM40-206ENST00000376724 KIF24Q5T7B8 1368 aa16.69■□□□□ 0.26
TRIM40-206ENST00000376724 DLG5Q8TDM6 1919 aa16.69■□□□□ 0.26
TRIM40-206ENST00000376724 BCL11AQ9H165 835 aa16.69■□□□□ 0.26
TRIM40-206ENST00000376724 IGSF1Q8N6C5 1336 aa16.68■□□□□ 0.26
TRIM40-206ENST00000376724 ZNF335Q9H4Z2 1342 aaPredicted RBP16.68■□□□□ 0.26
TRIM40-206ENST00000376724 KIF1AQ12756 1690 aa16.68■□□□□ 0.26
TRIM40-206ENST00000376724 DCCP43146 1447 aa16.68■□□□□ 0.26
TRIM40-206ENST00000376724 GCP02774 474 aa16.67■□□□□ 0.26
TRIM40-206ENST00000376724 CT47B1P0C2W7 299 aaPredicted RBP16.67■□□□□ 0.26
TRIM40-206ENST00000376724 PANK1Q8TE04 598 aa16.67■□□□□ 0.26
TRIM40-206ENST00000376724 IP6K1Q92551 441 aa16.67■□□□□ 0.26
TRIM40-206ENST00000376724 LTN1O94822 1766 aa16.67■□□□□ 0.26
TRIM40-206ENST00000376724 NFAT5O94916 1531 aa16.66■□□□□ 0.26
TRIM40-206ENST00000376724 GNAI1P63096 354 aa16.66■□□□□ 0.26
TRIM40-206ENST00000376724 MCM10Q7L590 875 aa16.65■□□□□ 0.26
TRIM40-206ENST00000376724 USHBP1Q8N6Y0 703 aa16.65■□□□□ 0.26
TRIM40-206ENST00000376724 SMC4Q9NTJ3 1288 aa16.65■□□□□ 0.26
TRIM40-206ENST00000376724 IFT57Q9NWB7 429 aa16.65■□□□□ 0.26
TRIM40-206ENST00000376724 RTL1A6NKG5 1358 aa16.65■□□□□ 0.26
TRIM40-206ENST00000376724 MTHFSDQ2M296 383 aaKnown RBP16.65■□□□□ 0.26
TRIM40-206ENST00000376724 MBIPQ9NS73 344 aa16.65■□□□□ 0.26
TRIM40-206ENST00000376724 TRPM3Q9HCF6 1732 aaPredicted RBP16.65■□□□□ 0.26
TRIM40-206ENST00000376724 KDRP35968 1356 aa16.65■□□□□ 0.26
TRIM40-206ENST00000376724 PDE3AQ14432 1141 aa16.64■□□□□ 0.25
TRIM40-206ENST00000376724 TNNQ9UQP3 1299 aa16.64■□□□□ 0.25
TRIM40-206ENST00000376724 COG6Q9Y2V7 657 aa16.64■□□□□ 0.25
TRIM40-206ENST00000376724 SSH1Q8WYL5 1049 aa16.63■□□□□ 0.25
TRIM40-206ENST00000376724 CLUAP1Q96AJ1 413 aa16.63■□□□□ 0.25
TRIM40-206ENST00000376724 CFAP44Q96MT7 982 aa16.63■□□□□ 0.25
TRIM40-206ENST00000376724 ZNF853P0CG23 659 aa16.63■□□□□ 0.25
TRIM40-206ENST00000376724 ELL2O00472 640 aaPredicted RBP16.62■□□□□ 0.25
TRIM40-206ENST00000376724 XIRP1Q702N8 1843 aaKnown RBP16.62■□□□□ 0.25
TRIM40-206ENST00000376724 ARHGEF25Q86VW2 580 aa16.62■□□□□ 0.25
TRIM40-206ENST00000376724 NPHP3Q7Z494 1330 aa16.61■□□□□ 0.25
TRIM40-206ENST00000376724 TSPYL6Q8N831 410 aa16.61■□□□□ 0.25
TRIM40-206ENST00000376724 RTF1Q92541 710 aaKnown RBP16.61■□□□□ 0.25
TRIM40-206ENST00000376724 USP19O94966 1318 aa16.61■□□□□ 0.25
TRIM40-206ENST00000376724 RLBP1P12271 317 aa16.6■□□□□ 0.25
TRIM40-206ENST00000376724 ZC3H6P61129 1189 aaKnown RBP16.6■□□□□ 0.25
TRIM40-206ENST00000376724 NBPF6Q5VWK0 638 aa16.6■□□□□ 0.25
TRIM40-206ENST00000376724 ZKSCAN2Q63HK3 967 aa16.6■□□□□ 0.25
TRIM40-206ENST00000376724 GAS2L2Q8NHY3 880 aa16.6■□□□□ 0.25
TRIM40-206ENST00000376724 NBPF4Q96M43 638 aa16.6■□□□□ 0.25
TRIM40-206ENST00000376724 SLIT3O75094 1523 aa16.6■□□□□ 0.25
TRIM40-206ENST00000376724 LRRC59Q96AG4 307 aaKnown RBP16.6■□□□□ 0.25
TRIM40-206ENST00000376724 NOB1Q9ULX3 412 aaKnown RBP16.59■□□□□ 0.25
TRIM40-206ENST00000376724 BRINP3Q76B58 766 aa16.58■□□□□ 0.25
TRIM40-206ENST00000376724 VAMP4O75379 141 aa16.58■□□□□ 0.24
TRIM40-206ENST00000376724 FTSJ3Q8IY81 847 aaKnown RBP16.58■□□□□ 0.24
TRIM40-206ENST00000376724 C8orf58Q8NAV2 365 aa16.58■□□□□ 0.24
TRIM40-206ENST00000376724 CABLES1Q8TDN4 633 aa16.58■□□□□ 0.24
TRIM40-206ENST00000376724 ALS2Q96Q42 1657 aa16.58■□□□□ 0.24
TRIM40-206ENST00000376724 TWISTNBQ3B726 338 aaPredicted RBP16.57■□□□□ 0.24
TRIM40-206ENST00000376724 SLAIN2Q9P270 581 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms