RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 LMO7Q8WWI1 1683 aa12.38□□□□□ -0.43
TRIM39-202ENST00000376659 ADAMTS7Q9UKP4 1686 aa12.38□□□□□ -0.43
TRIM39-202ENST00000376659 NEUROD2Q15784 382 aa12.37□□□□□ -0.43
TRIM39-202ENST00000376659 NME9Q86XW9 330 aa12.37□□□□□ -0.43
TRIM39-202ENST00000376659 POGKQ9P215 609 aa12.37□□□□□ -0.43
TRIM39-202ENST00000376659 NFAT5O94916 1531 aa12.37□□□□□ -0.43
TRIM39-202ENST00000376659 LTKP29376 864 aa12.36□□□□□ -0.43
TRIM39-202ENST00000376659 UBE2Q2Q8WVN8 375 aa12.36□□□□□ -0.43
TRIM39-202ENST00000376659 BCL2L13Q9BXK5 485 aa12.36□□□□□ -0.43
TRIM39-202ENST00000376659 EMILIN1Q9Y6C2 1016 aa12.36□□□□□ -0.43
TRIM39-202ENST00000376659 CACNA1FO60840 1977 aa12.36□□□□□ -0.43
TRIM39-202ENST00000376659 CRB1P82279 1406 aa12.36□□□□□ -0.43
TRIM39-202ENST00000376659 ALDH1L2Q3SY69 923 aa12.36□□□□□ -0.43
TRIM39-202ENST00000376659 ZBTB40Q9NUA8 1239 aa12.36□□□□□ -0.43
TRIM39-202ENST00000376659 ABCC4O15439 1325 aa12.35□□□□□ -0.43
TRIM39-202ENST00000376659 NUDT16Q96DE0 195 aaKnown RBP12.35□□□□□ -0.43
TRIM39-202ENST00000376659 PLEKHG3A1L390 1219 aa12.34□□□□□ -0.43
TRIM39-202ENST00000376659 NFE2L2Q16236 605 aa12.34□□□□□ -0.43
TRIM39-202ENST00000376659 KDRP35968 1356 aa12.34□□□□□ -0.43
TRIM39-202ENST00000376659 ZKSCAN2Q63HK3 967 aa12.34□□□□□ -0.43
TRIM39-202ENST00000376659 ATF7IPQ6VMQ6 1270 aa12.34□□□□□ -0.43
TRIM39-202ENST00000376659 PMFBP1Q8TBY8 1022 aa12.34□□□□□ -0.43
TRIM39-202ENST00000376659 RIPK4P57078 832 aa12.33□□□□□ -0.43
TRIM39-202ENST00000376659 SMC5Q8IY18 1101 aa12.33□□□□□ -0.43
TRIM39-202ENST00000376659 NCOA3Q9Y6Q9 1424 aa12.33□□□□□ -0.44
TRIM39-202ENST00000376659 DZIP1LQ8IYY4 767 aaKnown RBP12.33□□□□□ -0.44
TRIM39-202ENST00000376659 SENP3Q9H4L4 574 aaPredicted RBP12.33□□□□□ -0.44
TRIM39-202ENST00000376659 DAXXQ9UER7 740 aaPredicted RBP12.33□□□□□ -0.44
TRIM39-202ENST00000376659 PDZRN3Q9UPQ7 1066 aa12.33□□□□□ -0.44
TRIM39-202ENST00000376659 ATP10DQ9P241 1426 aa12.33□□□□□ -0.44
TRIM39-202ENST00000376659 ANKARQ7Z5J8 1434 aa12.33□□□□□ -0.44
TRIM39-202ENST00000376659 PRKAR2BP31323 418 aa12.33□□□□□ -0.44
TRIM39-202ENST00000376659 TXNDC2Q86VQ3 553 aa12.33□□□□□ -0.44
TRIM39-202ENST00000376659 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
TRIM39-202ENST00000376659 MRPL50Q8N5N7 158 aaKnown RBP12.32□□□□□ -0.44
TRIM39-202ENST00000376659 DDRGK1Q96HY6 314 aa12.32□□□□□ -0.44
TRIM39-202ENST00000376659 NOB1Q9ULX3 412 aaKnown RBP12.32□□□□□ -0.44
TRIM39-202ENST00000376659 NPM2Q86SE8 214 aaKnown RBP12.32□□□□□ -0.44
TRIM39-202ENST00000376659 FRAT1Q92837 279 aaPredicted RBP12.32□□□□□ -0.44
TRIM39-202ENST00000376659 VAMP4O75379 141 aa12.32□□□□□ -0.44
TRIM39-202ENST00000376659 DEKP35659 375 aaKnown RBP12.32□□□□□ -0.44
TRIM39-202ENST00000376659 IFT57Q9NWB7 429 aa12.31□□□□□ -0.44
TRIM39-202ENST00000376659 ARHGEF10O15013 1369 aa12.31□□□□□ -0.44
TRIM39-202ENST00000376659 KIF24Q5T7B8 1368 aa12.31□□□□□ -0.44
TRIM39-202ENST00000376659 TMEM57Q8N5G2 664 aa12.31□□□□□ -0.44
TRIM39-202ENST00000376659 ANTXR1Q9H6X2 564 aa12.31□□□□□ -0.44
TRIM39-202ENST00000376659 CCDC61Q9Y6R9 512 aa12.31□□□□□ -0.44
TRIM39-202ENST00000376659 U2SURPO15042 1029 aaKnown RBP12.31□□□□□ -0.44
TRIM39-202ENST00000376659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRIM39-202ENST00000376659 TBC1D32Q96NH3 1257 aa12.31□□□□□ -0.44
TRIM39-202ENST00000376659 USP35Q9P2H5 1018 aa12.31□□□□□ -0.44
TRIM39-202ENST00000376659 RGS3P49796 1198 aa12.3□□□□□ -0.44
TRIM39-202ENST00000376659 ZNF428Q96B54 188 aa12.3□□□□□ -0.44
TRIM39-202ENST00000376659 TSPYL6Q8N831 410 aa12.3□□□□□ -0.44
TRIM39-202ENST00000376659 TTC21BQ7Z4L5 1316 aa12.3□□□□□ -0.44
TRIM39-202ENST00000376659 KIF16BQ96L93 1317 aa12.3□□□□□ -0.44
TRIM39-202ENST00000376659 MBIPQ9NS73 344 aa12.29□□□□□ -0.44
TRIM39-202ENST00000376659 NCAPD2Q15021 1401 aa12.29□□□□□ -0.44
TRIM39-202ENST00000376659 NBR1Q14596 966 aa12.29□□□□□ -0.44
TRIM39-202ENST00000376659 ARHGAP45Q92619 1136 aa12.29□□□□□ -0.44
TRIM39-202ENST00000376659 ALS2Q96Q42 1657 aa12.28□□□□□ -0.44
TRIM39-202ENST00000376659 ZBTB7BO15156 539 aaPredicted RBP12.28□□□□□ -0.44
TRIM39-202ENST00000376659 SIRT2Q8IXJ6 389 aa12.28□□□□□ -0.44
TRIM39-202ENST00000376659 SMC4Q9NTJ3 1288 aa12.28□□□□□ -0.44
TRIM39-202ENST00000376659 LMTK3Q96Q04 1460 aa12.28□□□□□ -0.44
TRIM39-202ENST00000376659 EIF4A2Q14240 407 aaKnown RBP12.28□□□□□ -0.44
TRIM39-202ENST00000376659 SLIT3O75094 1523 aa12.27□□□□□ -0.44
TRIM39-202ENST00000376659 PNNQ9H307 717 aaKnown RBP12.27□□□□□ -0.44
TRIM39-202ENST00000376659 NUCB1Q02818 461 aa12.27□□□□□ -0.45
TRIM39-202ENST00000376659 DNAJC5Q9H3Z4 198 aa12.27□□□□□ -0.45
TRIM39-202ENST00000376659 DDX19BQ9UMR2 479 aa12.27□□□□□ -0.45
TRIM39-202ENST00000376659 ACEP12821 1306 aa12.27□□□□□ -0.45
TRIM39-202ENST00000376659 KIAA0232Q92628 1395 aa12.27□□□□□ -0.45
TRIM39-202ENST00000376659 MLECQ14165 292 aa12.27□□□□□ -0.45
TRIM39-202ENST00000376659 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.45
TRIM39-202ENST00000376659 RRS1Q15050 365 aaKnown RBP12.26□□□□□ -0.45
TRIM39-202ENST00000376659 ZNF692Q9BU19 519 aaPredicted RBP12.26□□□□□ -0.45
TRIM39-202ENST00000376659 SLC4A3P48751 1232 aa12.26□□□□□ -0.45
TRIM39-202ENST00000376659 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
TRIM39-202ENST00000376659 STRCP1A6NGW2 1772 aa12.26□□□□□ -0.45
TRIM39-202ENST00000376659 RGPD5Q99666 1765 aa12.26□□□□□ -0.45
TRIM39-202ENST00000376659 HMOX1P09601 288 aa12.25□□□□□ -0.45
TRIM39-202ENST00000376659 DDIT3P35638 169 aa12.25□□□□□ -0.45
TRIM39-202ENST00000376659 RWDD1Q9H446 243 aaPredicted RBP12.25□□□□□ -0.45
TRIM39-202ENST00000376659 STAG3Q9UJ98 1225 aa12.24□□□□□ -0.45
TRIM39-202ENST00000376659 LAS1LQ9Y4W2 734 aaKnown RBP12.24□□□□□ -0.45
TRIM39-202ENST00000376659 SBNO1A3KN83 1393 aa12.24□□□□□ -0.45
TRIM39-202ENST00000376659 AEBP1Q8IUX7 1158 aa12.24□□□□□ -0.45
TRIM39-202ENST00000376659 C8orf58Q8NAV2 365 aa12.24□□□□□ -0.45
TRIM39-202ENST00000376659 MST1RQ04912 1400 aa12.23□□□□□ -0.45
TRIM39-202ENST00000376659 FAM83GA6ND36 823 aa12.23□□□□□ -0.45
TRIM39-202ENST00000376659 CANXP27824 592 aaKnown RBP12.23□□□□□ -0.45
TRIM39-202ENST00000376659 RTL1A6NKG5 1358 aa12.23□□□□□ -0.45
TRIM39-202ENST00000376659 GLI3P10071 1580 aa12.23□□□□□ -0.45
TRIM39-202ENST00000376659 NFKBIBQ15653 356 aa12.23□□□□□ -0.45
TRIM39-202ENST00000376659 TBX22Q9Y458 520 aa12.23□□□□□ -0.45
TRIM39-202ENST00000376659 IGSF1Q8N6C5 1336 aa12.23□□□□□ -0.45
TRIM39-202ENST00000376659 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
TRIM39-202ENST00000376659 COL18A1P39060 1754 aa12.23□□□□□ -0.45
TRIM39-202ENST00000376659 COG3Q96JB2 828 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms