RNA–Protein interactions for RNA: ENST00000376618.6

CPT1A-202, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-202ENST00000376618 KIF20BQ96Q89 1820 aa17.83■□□□□ 0.45
CPT1A-202ENST00000376618 TMEM2Q9UHN6 1383 aa17.83■□□□□ 0.44
CPT1A-202ENST00000376618 EIF4A2Q14240 407 aaKnown RBP17.83■□□□□ 0.44
CPT1A-202ENST00000376618 FAM135BQ49AJ0 1406 aa17.82■□□□□ 0.44
CPT1A-202ENST00000376618 FRAT2O75474 233 aaPredicted RBP17.82■□□□□ 0.44
CPT1A-202ENST00000376618 ZBTB40Q9NUA8 1239 aa17.82■□□□□ 0.44
CPT1A-202ENST00000376618 AMOTL2Q9Y2J4 779 aa17.81■□□□□ 0.44
CPT1A-202ENST00000376618 MFAP1P55081 439 aaKnown RBP17.81■□□□□ 0.44
CPT1A-202ENST00000376618 MED14O60244 1454 aa17.8■□□□□ 0.44
CPT1A-202ENST00000376618 DDX19BQ9UMR2 479 aa17.8■□□□□ 0.44
CPT1A-202ENST00000376618 EDC4Q6P2E9 1401 aaKnown RBP17.8■□□□□ 0.44
CPT1A-202ENST00000376618 ANKRD26Q9UPS8 1709 aa17.8■□□□□ 0.44
CPT1A-202ENST00000376618 TTC21BQ7Z4L5 1316 aa17.8■□□□□ 0.44
CPT1A-202ENST00000376618 TWISTNBQ3B726 338 aaPredicted RBP17.79■□□□□ 0.44
CPT1A-202ENST00000376618 ATP7BP35670 1465 aa17.79■□□□□ 0.44
CPT1A-202ENST00000376618 ADAMTS13Q76LX8 1427 aa17.79■□□□□ 0.44
CPT1A-202ENST00000376618 MRPL50Q8N5N7 158 aaKnown RBP17.78■□□□□ 0.44
CPT1A-202ENST00000376618 PTPRUQ92729 1446 aa17.78■□□□□ 0.44
CPT1A-202ENST00000376618 PNNQ9H307 717 aaKnown RBP17.77■□□□□ 0.44
CPT1A-202ENST00000376618 IL16Q14005 1332 aa17.77■□□□□ 0.44
CPT1A-202ENST00000376618 TRHP20396 242 aaPredicted RBP17.76■□□□□ 0.43
CPT1A-202ENST00000376618 HDGFP51858 240 aaKnown RBP17.76■□□□□ 0.43
CPT1A-202ENST00000376618 LTV1Q96GA3 475 aaPredicted RBP17.76■□□□□ 0.43
CPT1A-202ENST00000376618 DLC1Q96QB1 1528 aa17.75■□□□□ 0.43
CPT1A-202ENST00000376618 APBB1O00213 710 aa17.75■□□□□ 0.43
CPT1A-202ENST00000376618 SIRT2Q8IXJ6 389 aa17.75■□□□□ 0.43
CPT1A-202ENST00000376618 ZBTB7BO15156 539 aaPredicted RBP17.75■□□□□ 0.43
CPT1A-202ENST00000376618 ANKRD45Q5TZF3 282 aa17.75■□□□□ 0.43
CPT1A-202ENST00000376618 NGDNQ8NEJ9 315 aaKnown RBP17.75■□□□□ 0.43
CPT1A-202ENST00000376618 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.75■□□□□ 0.43
CPT1A-202ENST00000376618 CT47B1P0C2W7 299 aaPredicted RBP17.74■□□□□ 0.43
CPT1A-202ENST00000376618 NECTIN2Q92692 538 aa17.74■□□□□ 0.43
CPT1A-202ENST00000376618 IPO8O15397 1037 aaKnown RBP17.74■□□□□ 0.43
CPT1A-202ENST00000376618 ZNF853P0CG23 659 aa17.74■□□□□ 0.43
CPT1A-202ENST00000376618 REREQ9P2R6 1566 aa17.74■□□□□ 0.43
CPT1A-202ENST00000376618 GNAI1P63096 354 aa17.73■□□□□ 0.43
CPT1A-202ENST00000376618 C14orf37Q86TY3 774 aa17.73■□□□□ 0.43
CPT1A-202ENST00000376618 CFAP44Q96MT7 982 aa17.73■□□□□ 0.43
CPT1A-202ENST00000376618 KIF16BQ96L93 1317 aa17.73■□□□□ 0.43
CPT1A-202ENST00000376618 ZNF692Q9BU19 519 aaPredicted RBP17.73■□□□□ 0.43
CPT1A-202ENST00000376618 HDAC1Q13547 482 aaPredicted RBP17.72■□□□□ 0.43
CPT1A-202ENST00000376618 IFT57Q9NWB7 429 aa17.72■□□□□ 0.43
CPT1A-202ENST00000376618 ZBTB7CA1YPR0 619 aa17.71■□□□□ 0.43
CPT1A-202ENST00000376618 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
CPT1A-202ENST00000376618 EID1Q9Y6B2 187 aa17.71■□□□□ 0.43
CPT1A-202ENST00000376618 DLG5Q8TDM6 1919 aa17.71■□□□□ 0.43
CPT1A-202ENST00000376618 MAP3K19Q56UN5 1328 aa17.71■□□□□ 0.43
CPT1A-202ENST00000376618 KCNA6P17658 529 aa17.71■□□□□ 0.43
CPT1A-202ENST00000376618 ALDH1L2Q3SY69 923 aa17.71■□□□□ 0.43
CPT1A-202ENST00000376618 SMC5Q8IY18 1101 aa17.7■□□□□ 0.42
CPT1A-202ENST00000376618 TBC1D2Q9BYX2 928 aa17.7■□□□□ 0.42
CPT1A-202ENST00000376618 CDC42BPGQ6DT37 1551 aa17.7■□□□□ 0.42
CPT1A-202ENST00000376618 USHBP1Q8N6Y0 703 aa17.7■□□□□ 0.42
CPT1A-202ENST00000376618 TBC1D32Q96NH3 1257 aa17.7■□□□□ 0.42
CPT1A-202ENST00000376618 UBR1Q8IWV7 1749 aa17.7■□□□□ 0.42
CPT1A-202ENST00000376618 C16orf71Q8IYS4 520 aaPredicted RBP17.69■□□□□ 0.42
CPT1A-202ENST00000376618 MTHFSDQ2M296 383 aaKnown RBP17.69■□□□□ 0.42
CPT1A-202ENST00000376618 F6X3S4 739 aa17.68■□□□□ 0.42
CPT1A-202ENST00000376618 NLRP6P59044 892 aa17.68■□□□□ 0.42
CPT1A-202ENST00000376618 CHD1LQ86WJ1 897 aa17.68■□□□□ 0.42
CPT1A-202ENST00000376618 AATKQ6ZMQ8 1374 aa17.68■□□□□ 0.42
CPT1A-202ENST00000376618 CDK12Q9NYV4 1490 aaPredicted RBP17.68■□□□□ 0.42
CPT1A-202ENST00000376618 NUCB1Q02818 461 aa17.67■□□□□ 0.42
CPT1A-202ENST00000376618 IL27Q8NEV9 243 aa17.67■□□□□ 0.42
CPT1A-202ENST00000376618 AMPHP49418 695 aa17.67■□□□□ 0.42
CPT1A-202ENST00000376618 G2E3Q7L622 706 aa17.67■□□□□ 0.42
CPT1A-202ENST00000376618 C22orf23Q9BZE7 217 aa17.67■□□□□ 0.42
CPT1A-202ENST00000376618 SETD1BQ9UPS6 1966 aaKnown RBP17.66■□□□□ 0.42
CPT1A-202ENST00000376618 RGPD8O14715 1765 aaPredicted RBP17.66■□□□□ 0.42
CPT1A-202ENST00000376618 PLEKHG3A1L390 1219 aa17.66■□□□□ 0.42
CPT1A-202ENST00000376618 EYA1Q99502 592 aa17.66■□□□□ 0.42
CPT1A-202ENST00000376618 UPF2Q9HAU5 1272 aaKnown RBP17.66■□□□□ 0.42
CPT1A-202ENST00000376618 TECPR2O15040 1411 aa17.66■□□□□ 0.42
CPT1A-202ENST00000376618 USP6P35125 1406 aa17.66■□□□□ 0.42
CPT1A-202ENST00000376618 PRKCSHP14314 528 aaPredicted RBP17.66■□□□□ 0.42
CPT1A-202ENST00000376618 XPCQ01831 940 aaPredicted RBP17.66■□□□□ 0.42
CPT1A-202ENST00000376618 OTUD7AQ8TE49 926 aaPredicted RBP17.66■□□□□ 0.42
CPT1A-202ENST00000376618 ARXQ96QS3 562 aa17.66■□□□□ 0.42
CPT1A-202ENST00000376618 RIMS1Q86UR5 1692 aaKnown RBP17.65■□□□□ 0.42
CPT1A-202ENST00000376618 AAMPQ13685 434 aa17.65■□□□□ 0.42
CPT1A-202ENST00000376618 SLC4A10Q6U841 1118 aa17.65■□□□□ 0.42
CPT1A-202ENST00000376618 SMARCA5O60264 1052 aaPredicted RBP17.65■□□□□ 0.42
CPT1A-202ENST00000376618 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
CPT1A-202ENST00000376618 SIRT1Q96EB6 747 aa17.64■□□□□ 0.41
CPT1A-202ENST00000376618 C3P01024 1663 aa17.64■□□□□ 0.41
CPT1A-202ENST00000376618 PLEKHG1Q9ULL1 1385 aa17.64■□□□□ 0.41
CPT1A-202ENST00000376618 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
CPT1A-202ENST00000376618 MON2Q7Z3U7 1717 aa17.63■□□□□ 0.41
CPT1A-202ENST00000376618 PEAK1Q9H792 1746 aa17.63■□□□□ 0.41
CPT1A-202ENST00000376618 RBM42Q9BTD8 480 aaKnown RBP17.62■□□□□ 0.41
CPT1A-202ENST00000376618 VIRMAQ69YN4 1812 aaKnown RBP17.62■□□□□ 0.41
CPT1A-202ENST00000376618 CALD1Q05682 793 aaKnown RBP17.62■□□□□ 0.41
CPT1A-202ENST00000376618 ABTB2Q8N961 1025 aa17.62■□□□□ 0.41
CPT1A-202ENST00000376618 MEIS3Q99687 375 aa17.62■□□□□ 0.41
CPT1A-202ENST00000376618 OVOS2A0A0J9YW53 1432 aa17.61■□□□□ 0.41
CPT1A-202ENST00000376618 OVOS2Q6IE36 1432 aa17.61■□□□□ 0.41
CPT1A-202ENST00000376618 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
CPT1A-202ENST00000376618 CHL1O00533 1208 aa17.61■□□□□ 0.41
CPT1A-202ENST00000376618 ABCC4O15439 1325 aa17.61■□□□□ 0.41
CPT1A-202ENST00000376618 USP35Q9P2H5 1018 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms