RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 SAFBQ15424 915 aaKnown RBP eCLIP13.18□□□□□ -0.3
MDC1-201ENST00000376406 RALYLQ86SE5 291 aaKnown RBP13.18□□□□□ -0.3
MDC1-201ENST00000376406 PES1O00541 588 aaKnown RBP13.18□□□□□ -0.3
MDC1-201ENST00000376406 AMOTQ4VCS5 1084 aa13.18□□□□□ -0.3
MDC1-201ENST00000376406 NFXL1Q6ZNB6 911 aa13.18□□□□□ -0.3
MDC1-201ENST00000376406 CLASRPQ8N2M8 674 aaKnown RBP13.17□□□□□ -0.3
MDC1-201ENST00000376406 C1orf115Q9H7X2 142 aa13.17□□□□□ -0.3
MDC1-201ENST00000376406 TNRQ92752 1358 aa13.17□□□□□ -0.3
MDC1-201ENST00000376406 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
MDC1-201ENST00000376406 MAPKBP1O60336 1514 aa13.17□□□□□ -0.3
MDC1-201ENST00000376406 A0A0U1RQG5 324 aaPredicted RBP13.17□□□□□ -0.3
MDC1-201ENST00000376406 ABCC10Q5T3U5 1492 aa13.17□□□□□ -0.3
MDC1-201ENST00000376406 FAM43AQ8N2R8 423 aa13.17□□□□□ -0.3
MDC1-201ENST00000376406 ANKRD20A12PQ8NF67 263 aa13.17□□□□□ -0.3
MDC1-201ENST00000376406 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
MDC1-201ENST00000376406 TOM1O60784 492 aa13.16□□□□□ -0.3
MDC1-201ENST00000376406 CCDC73Q6ZRK6 1079 aa13.16□□□□□ -0.3
MDC1-201ENST00000376406 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.16□□□□□ -0.31e-6■■□□□ 14.4
MDC1-201ENST00000376406 MBD3O95983 291 aa13.16□□□□□ -0.3
MDC1-201ENST00000376406 NAT10Q9H0A0 1025 aaKnown RBP13.16□□□□□ -0.3
MDC1-201ENST00000376406 FCHSD2O94868 740 aa13.16□□□□□ -0.3
MDC1-201ENST00000376406 ZNF530Q6P9A1 599 aaPredicted RBP13.16□□□□□ -0.3
MDC1-201ENST00000376406 CHD1LQ86WJ1 897 aa13.16□□□□□ -0.3
MDC1-201ENST00000376406 NUDT16Q96DE0 195 aaKnown RBP13.16□□□□□ -0.3
MDC1-201ENST00000376406 CCDC70Q6NSX1 233 aa13.15□□□□□ -0.3
MDC1-201ENST00000376406 CCAR1Q8IX12 1150 aaKnown RBP13.15□□□□□ -0.3
MDC1-201ENST00000376406 SURF6O75683 361 aaKnown RBP13.15□□□□□ -0.3
MDC1-201ENST00000376406 FSD1Q9BTV5 496 aa13.15□□□□□ -0.3
MDC1-201ENST00000376406 PLCH2O75038 1416 aa13.15□□□□□ -0.3
MDC1-201ENST00000376406 A2MP01023 1474 aa13.15□□□□□ -0.3
MDC1-201ENST00000376406 DHX29Q7Z478 1369 aaKnown RBP13.15□□□□□ -0.3
MDC1-201ENST00000376406 DHX16O60231 1041 aaKnown RBP13.15□□□□□ -0.3
MDC1-201ENST00000376406 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
MDC1-201ENST00000376406 LRRCC1Q9C099 1032 aa13.15□□□□□ -0.31
MDC1-201ENST00000376406 SCAF11Q99590 1463 aaKnown RBP13.15□□□□□ -0.31
MDC1-201ENST00000376406 GPS2Q13227 327 aa13.14□□□□□ -0.31
MDC1-201ENST00000376406 NEUROD6Q96NK8 337 aa13.14□□□□□ -0.31
MDC1-201ENST00000376406 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
MDC1-201ENST00000376406 ZNF592Q92610 1267 aa13.14□□□□□ -0.31
MDC1-201ENST00000376406 SULT6B1Q6IMI4 303 aa13.14□□□□□ -0.31
MDC1-201ENST00000376406 ZSCAN25Q6NSZ9 544 aa13.14□□□□□ -0.31
MDC1-201ENST00000376406 SRCIN1Q9C0H9 1055 aa13.14□□□□□ -0.31
MDC1-201ENST00000376406 UHRF1BP1LA0JNW5 1464 aa13.14□□□□□ -0.31
MDC1-201ENST00000376406 ABCA5Q8WWZ7 1642 aa13.13□□□□□ -0.31
MDC1-201ENST00000376406 NSD2O96028 1365 aa13.13□□□□□ -0.31
MDC1-201ENST00000376406 ADGBQ8N7X0 1667 aa13.13□□□□□ -0.31
MDC1-201ENST00000376406 K7ELQ4 463 aaPredicted RBP13.13□□□□□ -0.31
MDC1-201ENST00000376406 CCDC158Q5M9N0 1113 aa13.13□□□□□ -0.31
MDC1-201ENST00000376406 WDHD1O75717 1129 aaPredicted RBP13.13□□□□□ -0.31
MDC1-201ENST00000376406 CCDC27Q2M243 656 aa13.13□□□□□ -0.31
MDC1-201ENST00000376406 RAD21O60216 631 aa13.12□□□□□ -0.31
MDC1-201ENST00000376406 NEK4P51957 841 aa13.12□□□□□ -0.31
MDC1-201ENST00000376406 CNNM1Q9NRU3 951 aa13.12□□□□□ -0.31
MDC1-201ENST00000376406 HDGFL1Q5TGJ6 251 aa13.12□□□□□ -0.31
MDC1-201ENST00000376406 DDX54Q8TDD1 881 aaKnown RBP13.12□□□□□ -0.31
MDC1-201ENST00000376406 TSPY26PQ9H489 355 aa13.12□□□□□ -0.31
MDC1-201ENST00000376406 C11orf95C9JLR9 678 aaPredicted RBP13.12□□□□□ -0.31
MDC1-201ENST00000376406 PDCP20941 246 aa13.12□□□□□ -0.31
MDC1-201ENST00000376406 WASHC4Q2M389 1173 aa13.12□□□□□ -0.31
MDC1-201ENST00000376406 TNNT3P45378 269 aaPredicted RBP13.12□□□□□ -0.31
MDC1-201ENST00000376406 CCDC173Q0VFZ6 552 aa13.12□□□□□ -0.31
MDC1-201ENST00000376406 MPHOSPH8Q99549 860 aa13.12□□□□□ -0.31
MDC1-201ENST00000376406 CAVIN1Q6NZI2 390 aaKnown RBP13.11□□□□□ -0.31
MDC1-201ENST00000376406 RALGAPBQ86X10 1494 aa13.11□□□□□ -0.31
MDC1-201ENST00000376406 HSP90AB3PQ58FF7 597 aa13.11□□□□□ -0.31
MDC1-201ENST00000376406 ABCC11Q96J66 1382 aa13.11□□□□□ -0.31
MDC1-201ENST00000376406 NFE2L2Q16236 605 aa13.11□□□□□ -0.31
MDC1-201ENST00000376406 TMPOP42166 694 aaKnown RBP13.11□□□□□ -0.31
MDC1-201ENST00000376406 CCAR2Q8N163 923 aaKnown RBP13.11□□□□□ -0.31
MDC1-201ENST00000376406 CCDC57Q2TAC2 916 aa13.11□□□□□ -0.31
MDC1-201ENST00000376406 GNAT3A8MTJ3 354 aa13.1□□□□□ -0.31
MDC1-201ENST00000376406 WWC2Q6AWC2 1192 aa13.1□□□□□ -0.31
MDC1-201ENST00000376406 OLFM4Q6UX06 510 aa13.1□□□□□ -0.31
MDC1-201ENST00000376406 HOMER1Q86YM7 354 aa13.1□□□□□ -0.31
MDC1-201ENST00000376406 BTBD11A6QL63 1104 aa13.1□□□□□ -0.31
MDC1-201ENST00000376406 TTC21BQ7Z4L5 1316 aa13.1□□□□□ -0.31
MDC1-201ENST00000376406 ZPR1O75312 459 aa13.1□□□□□ -0.31
MDC1-201ENST00000376406 IPO7O95373 1038 aaKnown RBP13.1□□□□□ -0.31
MDC1-201ENST00000376406 ANKRD1Q15327 319 aa13.1□□□□□ -0.31
MDC1-201ENST00000376406 TEX13AQ9BXU3 409 aaPredicted RBP13.1□□□□□ -0.31
MDC1-201ENST00000376406 FOSBP53539 338 aa13.1□□□□□ -0.31
MDC1-201ENST00000376406 ABCC2Q92887 1545 aa13.09□□□□□ -0.31
MDC1-201ENST00000376406 AEBP1Q8IUX7 1158 aa13.09□□□□□ -0.31
MDC1-201ENST00000376406 PCMTD1Q96MG8 357 aaPredicted RBP13.09□□□□□ -0.31
MDC1-201ENST00000376406 ALDH1L2Q3SY69 923 aa13.09□□□□□ -0.31
MDC1-201ENST00000376406 AMOTL2Q9Y2J4 779 aa13.09□□□□□ -0.31
MDC1-201ENST00000376406 GPATCH8Q9UKJ3 1502 aaKnown RBP13.09□□□□□ -0.31
MDC1-201ENST00000376406 PRPF40AO75400 957 aaKnown RBP13.09□□□□□ -0.31
MDC1-201ENST00000376406 NACAP1Q9BZK3 213 aa13.09□□□□□ -0.31
MDC1-201ENST00000376406 R3HCC1Q9Y3T6 440 aaKnown RBP13.09□□□□□ -0.31
MDC1-201ENST00000376406 IFT57Q9NWB7 429 aa13.09□□□□□ -0.31
MDC1-201ENST00000376406 TMOD3Q9NYL9 352 aa13.09□□□□□ -0.31
MDC1-201ENST00000376406 NGLY1Q96IV0 654 aa13.09□□□□□ -0.31
MDC1-201ENST00000376406 ATP10BO94823 1461 aa13.08□□□□□ -0.32
MDC1-201ENST00000376406 DNAJC2Q99543 621 aaKnown RBP13.08□□□□□ -0.32
MDC1-201ENST00000376406 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
MDC1-201ENST00000376406 ZNF287Q9HBT7 754 aa13.08□□□□□ -0.32
MDC1-201ENST00000376406 CIZ1Q9ULV3 898 aaPredicted RBP13.08□□□□□ -0.32
MDC1-201ENST00000376406 KIF1BO60333 1816 aa13.08□□□□□ -0.32
MDC1-201ENST00000376406 ZNF396Q96N95 335 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms