RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 INTS3Q68E01 1043 aaKnown RBP13.07□□□□□ -0.32
ZNF549-202ENST00000376233 ABTB2Q8N961 1025 aa13.07□□□□□ -0.32
ZNF549-202ENST00000376233 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
ZNF549-202ENST00000376233 PPIP5K1Q6PFW1 1433 aa13.07□□□□□ -0.32
ZNF549-202ENST00000376233 MRPL50Q8N5N7 158 aaKnown RBP13.07□□□□□ -0.32
ZNF549-202ENST00000376233 ANO2Q9NQ90 1003 aa13.07□□□□□ -0.32
ZNF549-202ENST00000376233 SHROOM2Q13796 1616 aa13.07□□□□□ -0.32
ZNF549-202ENST00000376233 SMC5Q8IY18 1101 aa13.06□□□□□ -0.32
ZNF549-202ENST00000376233 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
ZNF549-202ENST00000376233 ABCA6Q8N139 1617 aa13.06□□□□□ -0.32
ZNF549-202ENST00000376233 TBC1D9Q6ZT07 1266 aa13.06□□□□□ -0.32
ZNF549-202ENST00000376233 EXOC6BQ9Y2D4 811 aa13.06□□□□□ -0.32
ZNF549-202ENST00000376233 ACEP12821 1306 aa13.06□□□□□ -0.32
ZNF549-202ENST00000376233 RIMS2Q9UQ26 1411 aa13.05□□□□□ -0.32
ZNF549-202ENST00000376233 PLCB2Q00722 1185 aa13.05□□□□□ -0.32
ZNF549-202ENST00000376233 C16orf71Q8IYS4 520 aaPredicted RBP13.05□□□□□ -0.32
ZNF549-202ENST00000376233 RNF17Q9BXT8 1623 aaKnown RBP13.05□□□□□ -0.32
ZNF549-202ENST00000376233 LAMC1P11047 1609 aa13.05□□□□□ -0.32
ZNF549-202ENST00000376233 REC8O95072 547 aa13.05□□□□□ -0.32
ZNF549-202ENST00000376233 MCTP1Q6DN14 999 aa13.05□□□□□ -0.32
ZNF549-202ENST00000376233 PTMAP06454 111 aaKnown RBP13.04□□□□□ -0.32
ZNF549-202ENST00000376233 FOXO3O43524 673 aa13.04□□□□□ -0.32
ZNF549-202ENST00000376233 TEFQ10587 303 aa13.04□□□□□ -0.32
ZNF549-202ENST00000376233 EIF4A2Q14240 407 aaKnown RBP13.04□□□□□ -0.32
ZNF549-202ENST00000376233 KIAA1211Q6ZU35 1233 aa13.04□□□□□ -0.32
ZNF549-202ENST00000376233 TSHZ3Q63HK5 1081 aa13.03□□□□□ -0.32
ZNF549-202ENST00000376233 USHBP1Q8N6Y0 703 aa13.03□□□□□ -0.32
ZNF549-202ENST00000376233 K7ELQ4 463 aaPredicted RBP13.03□□□□□ -0.32
ZNF549-202ENST00000376233 ZBTB7BO15156 539 aaPredicted RBP13.03□□□□□ -0.32
ZNF549-202ENST00000376233 BMP2KLQ5H9B9 411 aa13.03□□□□□ -0.32
ZNF549-202ENST00000376233 IL13P35225 146 aa13.03□□□□□ -0.32
ZNF549-202ENST00000376233 MEIS3Q99687 375 aa13.03□□□□□ -0.32
ZNF549-202ENST00000376233 AMOTL2Q9Y2J4 779 aa13.03□□□□□ -0.32
ZNF549-202ENST00000376233 MLH3Q9UHC1 1453 aa13.03□□□□□ -0.32
ZNF549-202ENST00000376233 CLASP1Q7Z460 1538 aa13.02□□□□□ -0.33
ZNF549-202ENST00000376233 PSME1Q06323 249 aa13.02□□□□□ -0.33
ZNF549-202ENST00000376233 GAS2L2Q8NHY3 880 aa13.02□□□□□ -0.33
ZNF549-202ENST00000376233 ARAP3Q8WWN8 1544 aa13.01□□□□□ -0.33
ZNF549-202ENST00000376233 NEK4P51957 841 aa13.01□□□□□ -0.33
ZNF549-202ENST00000376233 IL1RAPL2Q9NP60 686 aa13.01□□□□□ -0.33
ZNF549-202ENST00000376233 USP19O94966 1318 aa13.01□□□□□ -0.33
ZNF549-202ENST00000376233 TTC21BQ7Z4L5 1316 aa13.01□□□□□ -0.33
ZNF549-202ENST00000376233 A0A0G2JS52 829 aa13.01□□□□□ -0.33
ZNF549-202ENST00000376233 GNAI2P04899 355 aa13.01□□□□□ -0.33
ZNF549-202ENST00000376233 UBTFL1P0CB47 393 aaPredicted RBP13.01□□□□□ -0.33
ZNF549-202ENST00000376233 PHF23Q9BUL5 403 aaPredicted RBP13.01□□□□□ -0.33
ZNF549-202ENST00000376233 ABCC3O15438 1527 aa13.01□□□□□ -0.33
ZNF549-202ENST00000376233 MAP4K4O95819 1239 aaPredicted RBP13□□□□□ -0.33
ZNF549-202ENST00000376233 TAOK2Q9UL54 1235 aa13□□□□□ -0.33
ZNF549-202ENST00000376233 SURF6O75683 361 aaKnown RBP13□□□□□ -0.33
ZNF549-202ENST00000376233 XPCQ01831 940 aaPredicted RBP13□□□□□ -0.33
ZNF549-202ENST00000376233 HDGFL1Q5TGJ6 251 aa13□□□□□ -0.33
ZNF549-202ENST00000376233 CCDC30Q5VVM6 783 aa13□□□□□ -0.33
ZNF549-202ENST00000376233 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
ZNF549-202ENST00000376233 TNPO1Q92973 898 aaKnown RBP13□□□□□ -0.33
ZNF549-202ENST00000376233 CSB-PGBD3P0DP91 1061 aa13□□□□□ -0.33
ZNF549-202ENST00000376233 CEP152O94986 1710 aa13□□□□□ -0.33
ZNF549-202ENST00000376233 IQGAP1P46940 1657 aa13□□□□□ -0.33
ZNF549-202ENST00000376233 PPRC1Q5VV67 1664 aaKnown RBP12.99□□□□□ -0.33
ZNF549-202ENST00000376233 OTUD7AQ8TE49 926 aaPredicted RBP12.99□□□□□ -0.33
ZNF549-202ENST00000376233 ARHGAP45Q92619 1136 aa12.99□□□□□ -0.33
ZNF549-202ENST00000376233 CCDC9Q9Y3X0 531 aaKnown RBP12.99□□□□□ -0.33
ZNF549-202ENST00000376233 SSFA2P28290 1259 aa12.99□□□□□ -0.33
ZNF549-202ENST00000376233 RABEP1Q15276 862 aa12.99□□□□□ -0.33
ZNF549-202ENST00000376233 SKOR2Q2VWA4 1001 aaPredicted RBP12.98□□□□□ -0.33
ZNF549-202ENST00000376233 C9orf78Q9NZ63 289 aaPredicted RBP12.98□□□□□ -0.33
ZNF549-202ENST00000376233 PTMSP20962 102 aa12.98□□□□□ -0.33
ZNF549-202ENST00000376233 AIMP1Q12904 312 aaKnown RBP12.98□□□□□ -0.33
ZNF549-202ENST00000376233 ESCO1Q5FWF5 840 aa12.98□□□□□ -0.33
ZNF549-202ENST00000376233 GNAI3P08754 354 aa12.98□□□□□ -0.33
ZNF549-202ENST00000376233 MSNP26038 577 aaKnown RBP12.98□□□□□ -0.33
ZNF549-202ENST00000376233 MRE11P49959 708 aa12.98□□□□□ -0.33
ZNF549-202ENST00000376233 CAVIN1Q6NZI2 390 aaKnown RBP12.98□□□□□ -0.33
ZNF549-202ENST00000376233 CCT4P50991 539 aaKnown RBP12.97□□□□□ -0.33
ZNF549-202ENST00000376233 PANK2Q9BZ23 570 aa12.97□□□□□ -0.33
ZNF549-202ENST00000376233 INO80Q9ULG1 1556 aaPredicted RBP12.97□□□□□ -0.33
ZNF549-202ENST00000376233 ZFYVE9O95405 1425 aa12.97□□□□□ -0.33
ZNF549-202ENST00000376233 C1orf141Q5JVX7 400 aa12.97□□□□□ -0.33
ZNF549-202ENST00000376233 HECW2Q9P2P5 1572 aa12.97□□□□□ -0.33
ZNF549-202ENST00000376233 ABCA9Q8IUA7 1624 aa12.96□□□□□ -0.33
ZNF549-202ENST00000376233 ADGRB3O60242 1522 aa12.96□□□□□ -0.33
ZNF549-202ENST00000376233 NEO1Q92859 1461 aa12.96□□□□□ -0.33
ZNF549-202ENST00000376233 LRRCC1Q9C099 1032 aa12.96□□□□□ -0.33
ZNF549-202ENST00000376233 NAP1L2Q9ULW6 460 aaPredicted RBP12.96□□□□□ -0.33
ZNF549-202ENST00000376233 ERC2O15083 957 aa12.96□□□□□ -0.33
ZNF549-202ENST00000376233 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.33
ZNF549-202ENST00000376233 NUCB2P80303 420 aa12.96□□□□□ -0.33
ZNF549-202ENST00000376233 MTHFSDQ2M296 383 aaKnown RBP12.96□□□□□ -0.33
ZNF549-202ENST00000376233 METP08581 1390 aa12.96□□□□□ -0.34
ZNF549-202ENST00000376233 ZMYM3Q14202 1370 aa12.96□□□□□ -0.34
ZNF549-202ENST00000376233 FGD1P98174 961 aa12.96□□□□□ -0.34
ZNF549-202ENST00000376233 ZNF330Q9Y3S2 320 aaPredicted RBP12.96□□□□□ -0.34
ZNF549-202ENST00000376233 TNRQ92752 1358 aa12.95□□□□□ -0.34
ZNF549-202ENST00000376233 G2E3Q7L622 706 aa12.95□□□□□ -0.34
ZNF549-202ENST00000376233 GRPEL1Q9HAV7 217 aa12.95□□□□□ -0.34
ZNF549-202ENST00000376233 PPP6R1Q9UPN7 881 aa12.95□□□□□ -0.34
ZNF549-202ENST00000376233 SDSP20132 328 aa12.95□□□□□ -0.34
ZNF549-202ENST00000376233 DNTTIP2Q5QJE6 756 aaKnown RBP12.95□□□□□ -0.34
ZNF549-202ENST00000376233 NUTM1Q86Y26 1132 aa12.95□□□□□ -0.34
ZNF549-202ENST00000376233 THEMISQ8N1K5 641 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms