RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ESCO1Q5FWF5 840 aa15.21■□□□□ 0.02
C9orf3-203ENST00000375315 ANP32BQ92688 251 aaKnown RBP15.21■□□□□ 0.02
C9orf3-203ENST00000375315 COG3Q96JB2 828 aa15.2■□□□□ 0.02
C9orf3-203ENST00000375315 NCLP19338 710 aaKnown RBP15.19■□□□□ 0.02
C9orf3-203ENST00000375315 MYO3AQ8NEV4 1616 aa15.19■□□□□ 0.02
C9orf3-203ENST00000375315 CEP170BQ9Y4F5 1589 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-203ENST00000375315 GOLGA2Q08379 1002 aa15.18■□□□□ 0.02
C9orf3-203ENST00000375315 IGHDP01880 384 aa15.17■□□□□ 0.02
C9orf3-203ENST00000375315 KDM4FA0A1W2PPD8 638 aa15.17■□□□□ 0.02
C9orf3-203ENST00000375315 DMRT2Q9Y5R5 561 aa15.17■□□□□ 0.02
C9orf3-203ENST00000375315 FOXO3O43524 673 aa15.17■□□□□ 0.02
C9orf3-203ENST00000375315 SKOR2Q2VWA4 1001 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-203ENST00000375315 PTMSP20962 102 aa15.16■□□□□ 0.02
C9orf3-203ENST00000375315 DDX17Q92841 729 aaKnown RBP15.16■□□□□ 0.02
C9orf3-203ENST00000375315 LTV1Q96GA3 475 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-203ENST00000375315 PUS7Q96PZ0 661 aaKnown RBP15.16■□□□□ 0.02
C9orf3-203ENST00000375315 PPP1R9BQ96SB3 815 aa15.16■□□□□ 0.02
C9orf3-203ENST00000375315 ORAI2Q96SN7 254 aa15.16■□□□□ 0.02
C9orf3-203ENST00000375315 TCP11L2Q8N4U5 519 aa15.15■□□□□ 0.02
C9orf3-203ENST00000375315 SPINK5Q9NQ38 1064 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-203ENST00000375315 R3HCC1Q9Y3T6 440 aaKnown RBP15.15■□□□□ 0.02
C9orf3-203ENST00000375315 CD163L1Q9NR16 1453 aa15.15■□□□□ 0.02
C9orf3-203ENST00000375315 NLRP6P59044 892 aa15.15■□□□□ 0.02
C9orf3-203ENST00000375315 UTP14CQ5TAP6 766 aaKnown RBP15.15■□□□□ 0.02
C9orf3-203ENST00000375315 POLKQ9UBT6 870 aa15.15■□□□□ 0.02
C9orf3-203ENST00000375315 GAS2L3Q86XJ1 694 aa15.14■□□□□ 0.01
C9orf3-203ENST00000375315 DIAPH1O60610 1272 aaKnown RBP15.14■□□□□ 0.01
C9orf3-203ENST00000375315 ZHX1Q9UKY1 873 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-203ENST00000375315 ARHGAP23Q9P227 1491 aa15.13■□□□□ 0.01
C9orf3-203ENST00000375315 NPC1L1Q9UHC9 1359 aa15.13■□□□□ 0.01
C9orf3-203ENST00000375315 TTC21BQ7Z4L5 1316 aa15.13■□□□□ 0.01
C9orf3-203ENST00000375315 ABTB2Q8N961 1025 aa15.13■□□□□ 0.01
C9orf3-203ENST00000375315 PSME1Q06323 249 aa15.12■□□□□ 0.01
C9orf3-203ENST00000375315 GBP4Q96PP9 640 aa15.12■□□□□ 0.01
C9orf3-203ENST00000375315 UQCRHLA0A096LP55 91 aa15.12■□□□□ 0.01
C9orf3-203ENST00000375315 UQCRHP07919 91 aa15.12■□□□□ 0.01
C9orf3-203ENST00000375315 NASPP49321 788 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-203ENST00000375315 FAM135BQ49AJ0 1406 aa15.12■□□□□ 0.01
C9orf3-203ENST00000375315 DYNC1I1O14576 645 aa15.12■□□□□ 0.01
C9orf3-203ENST00000375315 HSCBQ8IWL3 235 aa15.12■□□□□ 0.01
C9orf3-203ENST00000375315 CLUAP1Q96AJ1 413 aa15.12■□□□□ 0.01
C9orf3-203ENST00000375315 SLIT1O75093 1534 aa15.11■□□□□ 0.01
C9orf3-203ENST00000375315 SETD1BQ9UPS6 1966 aaKnown RBP15.11■□□□□ 0.01
C9orf3-203ENST00000375315 ZNF692Q9BU19 519 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-203ENST00000375315 SETD1AO15047 1707 aaKnown RBP15.11■□□□□ 0.01
C9orf3-203ENST00000375315 NPHP4O75161 1426 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-203ENST00000375315 SIRT1Q96EB6 747 aa15.11■□□□□ 0.01
C9orf3-203ENST00000375315 DMTNQ08495 405 aa15.1■□□□□ 0.01
C9orf3-203ENST00000375315 SLFN5Q08AF3 891 aa15.1■□□□□ 0.01
C9orf3-203ENST00000375315 ADAMTSL3P82987 1691 aa15.1■□□□□ 0.01
C9orf3-203ENST00000375315 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-203ENST00000375315 HSP90AB2PQ58FF8 381 aa15.1■□□□□ 0.01
C9orf3-203ENST00000375315 PHF8Q9UPP1 1060 aa15.1■□□□□ 0.01
C9orf3-203ENST00000375315 ZNF521Q96K83 1311 aa15.1■□□□□ 0.01
C9orf3-203ENST00000375315 NINLQ9Y2I6 1382 aa15.1■□□□□ 0.01
C9orf3-203ENST00000375315 PDE3AQ14432 1141 aa15.09■□□□□ 0.01
C9orf3-203ENST00000375315 HS1BP3Q53T59 392 aa15.09■□□□□ 0.01
C9orf3-203ENST00000375315 BBXQ8WY36 941 aaPredicted RBP15.09■□□□□ 0.01
C9orf3-203ENST00000375315 RUNDC1Q96C34 613 aa15.09■□□□□ 0.01
C9orf3-203ENST00000375315 DLC1Q96QB1 1528 aa15.09■□□□□ 0.01
C9orf3-203ENST00000375315 CPS1P31327 1500 aa15.08■□□□□ 0.01
C9orf3-203ENST00000375315 ATP7BP35670 1465 aa15.08■□□□□ 0.01
C9orf3-203ENST00000375315 PRKAR2BP31323 418 aa15.08■□□□□ 0.01
C9orf3-203ENST00000375315 THUMPD2Q9BTF0 503 aaKnown RBP15.08■□□□□ 0.01
C9orf3-203ENST00000375315 BCL2L13Q9BXK5 485 aa15.08■□□□□ 0.01
C9orf3-203ENST00000375315 PRDM10Q9NQV6 1147 aa15.08■□□□□ 0.01
C9orf3-203ENST00000375315 MED14O60244 1454 aa15.08■□□□□ 0
C9orf3-203ENST00000375315 TECPR2O15040 1411 aa15.08■□□□□ 0
C9orf3-203ENST00000375315 C22orf23Q9BZE7 217 aa15.08■□□□□ 0
C9orf3-203ENST00000375315 AMPHP49418 695 aa15.08■□□□□ 0
C9orf3-203ENST00000375315 CSPP1Q1MSJ5 1256 aa15.08■□□□□ 0
C9orf3-203ENST00000375315 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
C9orf3-203ENST00000375315 ARID3AQ99856 593 aa15.07■□□□□ 0
C9orf3-203ENST00000375315 ZNF500O60304 480 aaPredicted RBP15.06■□□□□ 0
C9orf3-203ENST00000375315 BCAR3O75815 825 aa15.06■□□□□ 0
C9orf3-203ENST00000375315 CANXP27824 592 aaKnown RBP15.06■□□□□ 0
C9orf3-203ENST00000375315 AEBP1Q8IUX7 1158 aa15.06■□□□□ 0
C9orf3-203ENST00000375315 CIZ1Q9ULV3 898 aaPredicted RBP15.06■□□□□ 0
C9orf3-203ENST00000375315 NKTRP30414 1462 aaKnown RBP15.06■□□□□ 0
C9orf3-203ENST00000375315 PLEKHG3A1L390 1219 aa15.06■□□□□ 0
C9orf3-203ENST00000375315 CCDC94Q9BW85 323 aaPredicted RBP15.06■□□□□ 0
C9orf3-203ENST00000375315 WWC1Q8IX03 1113 aa15.06■□□□□ 0
C9orf3-203ENST00000375315 TNPO1Q92973 898 aaKnown RBP15.05■□□□□ -0
C9orf3-203ENST00000375315 TSR2Q969E8 191 aaKnown RBP15.05■□□□□ -0
C9orf3-203ENST00000375315 PHACTR3Q96KR7 559 aa15.05■□□□□ -0
C9orf3-203ENST00000375315 EDC4Q6P2E9 1401 aaKnown RBP15.05■□□□□ -0
C9orf3-203ENST00000375315 ATF3P18847 181 aa15.05■□□□□ -0
C9orf3-203ENST00000375315 NSD2O96028 1365 aa15.05■□□□□ -0
C9orf3-203ENST00000375315 CPSF1Q10570 1443 aaKnown RBP15.04■□□□□ -0
C9orf3-203ENST00000375315 TRMT2AQ8IZ69 625 aaKnown RBP15.04■□□□□ -0
C9orf3-203ENST00000375315 NOL7Q9UMY1 257 aaKnown RBP15.04■□□□□ -0
C9orf3-203ENST00000375315 PDIA4P13667 645 aaKnown RBP15.03■□□□□ -0
C9orf3-203ENST00000375315 DCTN1Q14203 1278 aa15.03■□□□□ -0
C9orf3-203ENST00000375315 SULT6B1Q6IMI4 303 aa15.03■□□□□ -0
C9orf3-203ENST00000375315 GOLGA6L22H0YM25 854 aa15.03■□□□□ -0
C9orf3-203ENST00000375315 MFAP1P55081 439 aaKnown RBP15.03■□□□□ -0
C9orf3-203ENST00000375315 BCL11BQ9C0K0 894 aaPredicted RBP15.03■□□□□ -0
C9orf3-203ENST00000375315 PDZRN3Q9UPQ7 1066 aa15.03■□□□□ -0
C9orf3-203ENST00000375315 COG6Q9Y2V7 657 aa15.03■□□□□ -0
C9orf3-203ENST00000375315 ZNF335Q9H4Z2 1342 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 275.6 ms