RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 BIVM-ERCC5R4GMW8 1640 aa12.05□□□□□ -0.48
PTCH1-204ENST00000375290 WASF1Q92558 559 aa12.05□□□□□ -0.48
PTCH1-204ENST00000375290 ADAMTS8Q9UP79 889 aa12.05□□□□□ -0.48
PTCH1-204ENST00000375290 TROQ12816 1431 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-204ENST00000375290 NUP62CLQ9H1M0 184 aa12.04□□□□□ -0.48
PTCH1-204ENST00000375290 CHMP3Q9Y3E7 222 aa12.04□□□□□ -0.48
PTCH1-204ENST00000375290 NAIPQ13075 1403 aa12.04□□□□□ -0.48
PTCH1-204ENST00000375290 PYM1Q9BRP8 204 aaKnown RBP12.04□□□□□ -0.48
PTCH1-204ENST00000375290 LUZP1Q86V48 1076 aa12.04□□□□□ -0.48
PTCH1-204ENST00000375290 TTC5Q8N0Z6 440 aa12.04□□□□□ -0.48
PTCH1-204ENST00000375290 PPFIBP1Q86W92 1011 aa12.04□□□□□ -0.48
PTCH1-204ENST00000375290 HMGB1P09429 215 aaKnown RBP12.04□□□□□ -0.48
PTCH1-204ENST00000375290 TCP11L2Q8N4U5 519 aa12.04□□□□□ -0.48
PTCH1-204ENST00000375290 LRRCC1Q9C099 1032 aa12.03□□□□□ -0.48
PTCH1-204ENST00000375290 NUP160Q12769 1436 aa12.03□□□□□ -0.48
PTCH1-204ENST00000375290 MAGEC2Q9UBF1 373 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-204ENST00000375290 SFPQP23246 707 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTCH1-204ENST00000375290 NBPF1Q3BBV0 1214 aa12.03□□□□□ -0.48
PTCH1-204ENST00000375290 DNMBPQ6XZF7 1577 aa12.03□□□□□ -0.48
PTCH1-204ENST00000375290 FEZ1Q99689 392 aa12.03□□□□□ -0.48
PTCH1-204ENST00000375290 KIF20AO95235 890 aa12.03□□□□□ -0.48
PTCH1-204ENST00000375290 IMMTQ16891 758 aaKnown RBP12.03□□□□□ -0.48
PTCH1-204ENST00000375290 BMP2KLQ5H9B9 411 aa12.03□□□□□ -0.48
PTCH1-204ENST00000375290 V9GYY5 206 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-204ENST00000375290 PTPN14Q15678 1187 aa12.03□□□□□ -0.48
PTCH1-204ENST00000375290 PEG3Q9GZU2 1588 aa12.03□□□□□ -0.48
PTCH1-204ENST00000375290 EHBP1Q8NDI1 1231 aa12.03□□□□□ -0.48
PTCH1-204ENST00000375290 DNAAF4Q8WXU2 420 aa12.03□□□□□ -0.48
PTCH1-204ENST00000375290 CCDC171Q6TFL3 1326 aa12.02□□□□□ -0.48
PTCH1-204ENST00000375290 NGDNQ8NEJ9 315 aaKnown RBP12.02□□□□□ -0.48
PTCH1-204ENST00000375290 JPH4Q96JJ6 628 aa12.02□□□□□ -0.48
PTCH1-204ENST00000375290 ZSCAN25Q6NSZ9 544 aa12.02□□□□□ -0.48
PTCH1-204ENST00000375290 BCL2L13Q9BXK5 485 aa12.02□□□□□ -0.48
PTCH1-204ENST00000375290 RAB11FIP3O75154 756 aa12.02□□□□□ -0.49
PTCH1-204ENST00000375290 DDX19AQ9NUU7 478 aaKnown RBP12.02□□□□□ -0.49
PTCH1-204ENST00000375290 EPS15P42566 896 aa12.02□□□□□ -0.49
PTCH1-204ENST00000375290 STK26Q9P289 416 aa12.02□□□□□ -0.49
PTCH1-204ENST00000375290 IL16Q14005 1332 aa12.01□□□□□ -0.49
PTCH1-204ENST00000375290 AXDND1Q5T1B0 1012 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-204ENST00000375290 CCDC148Q8NFR7 591 aa12.01□□□□□ -0.49
PTCH1-204ENST00000375290 PANK1Q8TE04 598 aa12.01□□□□□ -0.49
PTCH1-204ENST00000375290 CTNNA3Q9UI47 895 aa12.01□□□□□ -0.49
PTCH1-204ENST00000375290 OFD1O75665 1012 aa12.01□□□□□ -0.49
PTCH1-204ENST00000375290 BMS1Q14692 1282 aaKnown RBP12.01□□□□□ -0.49
PTCH1-204ENST00000375290 ARHGAP5Q13017 1502 aa12.01□□□□□ -0.49
PTCH1-204ENST00000375290 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-204ENST00000375290 FCHSD2O94868 740 aa12.01□□□□□ -0.49
PTCH1-204ENST00000375290 SLFN5Q08AF3 891 aa12.01□□□□□ -0.49
PTCH1-204ENST00000375290 ANO10Q9NW15 660 aa12.01□□□□□ -0.49
PTCH1-204ENST00000375290 SMC2O95347 1197 aa12.01□□□□□ -0.49
PTCH1-204ENST00000375290 CEP131Q9UPN4 1083 aa12.01□□□□□ -0.49
PTCH1-204ENST00000375290 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-204ENST00000375290 LMOD2Q6P5Q4 547 aa12□□□□□ -0.49
PTCH1-204ENST00000375290 RRP7AQ9Y3A4 280 aaKnown RBP12□□□□□ -0.49
PTCH1-204ENST00000375290 HMGB2P26583 209 aaKnown RBP12□□□□□ -0.49
PTCH1-204ENST00000375290 TRIM22Q8IYM9 498 aa12□□□□□ -0.49
PTCH1-204ENST00000375290 DDX24Q9GZR7 859 aaKnown RBP eCLIP12□□□□□ -0.49
PTCH1-204ENST00000375290 ARHGEF12Q9NZN5 1544 aa12□□□□□ -0.49
PTCH1-204ENST00000375290 SERPINC1P01008 464 aa12□□□□□ -0.49
PTCH1-204ENST00000375290 SLC3A2P08195 630 aaKnown RBP12□□□□□ -0.49
PTCH1-204ENST00000375290 SPATA32Q96LK8 384 aa12□□□□□ -0.49
PTCH1-204ENST00000375290 CRACR2AQ9BSW2 395 aa12□□□□□ -0.49
PTCH1-204ENST00000375290 KIF14Q15058 1648 aa12□□□□□ -0.49
PTCH1-204ENST00000375290 TIGD1Q96MW7 591 aa12□□□□□ -0.49
PTCH1-204ENST00000375290 SNX21Q969T3 373 aa12□□□□□ -0.49
PTCH1-204ENST00000375290 UPF3BQ9BZI7 483 aaKnown RBP12□□□□□ -0.49
PTCH1-204ENST00000375290 ANAPC15P60006 121 aa11.99□□□□□ -0.49
PTCH1-204ENST00000375290 AEBP2Q6ZN18 517 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-204ENST00000375290 STK38Q15208 465 aa11.99□□□□□ -0.49
PTCH1-204ENST00000375290 TTLL5Q6EMB2 1281 aa11.99□□□□□ -0.49
PTCH1-204ENST00000375290 DDX12PQ92771 950 aa11.99□□□□□ -0.49
PTCH1-204ENST00000375290 GIMAP7Q8NHV1 300 aa11.99□□□□□ -0.49
PTCH1-204ENST00000375290 CCDC150Q8NCX0 1101 aa11.99□□□□□ -0.49
PTCH1-204ENST00000375290 PHAXQ9H814 394 aaKnown RBP11.99□□□□□ -0.49
PTCH1-204ENST00000375290 RNF214Q8ND24 703 aa11.99□□□□□ -0.49
PTCH1-204ENST00000375290 TOMM22Q9NS69 142 aa11.99□□□□□ -0.49
PTCH1-204ENST00000375290 PCF11O94913 1555 aaKnown RBP11.98□□□□□ -0.49
PTCH1-204ENST00000375290 NFXL1Q6ZNB6 911 aa11.98□□□□□ -0.49
PTCH1-204ENST00000375290 BCL11BQ9C0K0 894 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-204ENST00000375290 TRAK1Q9UPV9 953 aa11.98□□□□□ -0.49
PTCH1-204ENST00000375290 FOXD4L5Q5VV16 416 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-204ENST00000375290 FOXD4L4Q8WXT5 416 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-204ENST00000375290 A0A0G2JS52 829 aa11.98□□□□□ -0.49
PTCH1-204ENST00000375290 SAFB2Q14151 953 aaKnown RBP eCLIP11.98□□□□□ -0.49
PTCH1-204ENST00000375290 ZNF397Q8NF99 534 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-204ENST00000375290 CCDC181Q5TID7 509 aa11.98□□□□□ -0.49
PTCH1-204ENST00000375290 KRT222Q8N1A0 295 aa11.98□□□□□ -0.49
PTCH1-204ENST00000375290 TBC1D2BQ9UPU7 963 aa11.98□□□□□ -0.49
PTCH1-204ENST00000375290 TWISTNBQ3B726 338 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-204ENST00000375290 SLC26A8Q96RN1 970 aa11.97□□□□□ -0.49
PTCH1-204ENST00000375290 LARP1BQ659C4 914 aaKnown RBP11.97□□□□□ -0.49
PTCH1-204ENST00000375290 SNAPC4Q5SXM2 1469 aa11.97□□□□□ -0.49
PTCH1-204ENST00000375290 KIF5CO60282 957 aa11.97□□□□□ -0.49
PTCH1-204ENST00000375290 CT47A1Q5JQC4 288 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-204ENST00000375290 ODF2Q5BJF6 829 aa11.97□□□□□ -0.49
PTCH1-204ENST00000375290 TBC1D32Q96NH3 1257 aa11.97□□□□□ -0.49
PTCH1-204ENST00000375290 CFAP43Q8NDM7 1665 aa11.96□□□□□ -0.49
PTCH1-204ENST00000375290 IQGAP2Q13576 1575 aa11.96□□□□□ -0.49
PTCH1-204ENST00000375290 FAM135AQ9P2D6 1515 aa11.96□□□□□ -0.49
PTCH1-204ENST00000375290 ARHGAP29Q52LW3 1261 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms