RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 SDF4Q9BRK5 362 aa23.42■■□□□ 1.34
TGFBR1-201ENST00000374990 CCDC47Q96A33 483 aaKnown RBP23.41■■□□□ 1.34
TGFBR1-201ENST00000374990 FANCAO15360 1455 aa23.41■■□□□ 1.34
TGFBR1-201ENST00000374990 NAT10Q9H0A0 1025 aaKnown RBP23.41■■□□□ 1.34
TGFBR1-201ENST00000374990 AMER1Q5JTC6 1135 aaPredicted RBP23.41■■□□□ 1.34
TGFBR1-201ENST00000374990 IL16Q14005 1332 aa23.41■■□□□ 1.34
TGFBR1-201ENST00000374990 NOS1P29475 1434 aa23.41■■□□□ 1.34
TGFBR1-201ENST00000374990 SRGAP3O43295 1099 aa23.41■■□□□ 1.34
TGFBR1-201ENST00000374990 TPM2P07951 284 aa23.41■■□□□ 1.34
TGFBR1-201ENST00000374990 WAPLQ7Z5K2 1190 aa23.41■■□□□ 1.34
TGFBR1-201ENST00000374990 ANKLE2Q86XL3 938 aa23.4■■□□□ 1.34
TGFBR1-201ENST00000374990 AEBP1Q8IUX7 1158 aa23.4■■□□□ 1.34
TGFBR1-201ENST00000374990 MSH5O43196 834 aa23.4■■□□□ 1.34
TGFBR1-201ENST00000374990 DHX16O60231 1041 aaKnown RBP23.4■■□□□ 1.34
TGFBR1-201ENST00000374990 PARD3Q8TEW0 1356 aa23.4■■□□□ 1.34
TGFBR1-201ENST00000374990 THUMPD2Q9BTF0 503 aaKnown RBP23.4■■□□□ 1.34
TGFBR1-201ENST00000374990 BRPF3Q9ULD4 1205 aa23.4■■□□□ 1.34
TGFBR1-201ENST00000374990 IPO7O95373 1038 aaKnown RBP23.39■■□□□ 1.34
TGFBR1-201ENST00000374990 GNAT3A8MTJ3 354 aa23.38■■□□□ 1.33
TGFBR1-201ENST00000374990 TBC1D2BQ9UPU7 963 aa23.38■■□□□ 1.33
TGFBR1-201ENST00000374990 PRAG1Q86YV5 1406 aa23.38■■□□□ 1.33
TGFBR1-201ENST00000374990 TSPY26PQ9H489 355 aa23.38■■□□□ 1.33
TGFBR1-201ENST00000374990 PLCH2O75038 1416 aa23.38■■□□□ 1.33
TGFBR1-201ENST00000374990 WASLO00401 505 aaPredicted RBP23.38■■□□□ 1.33
TGFBR1-201ENST00000374990 TRIM27P14373 513 aa23.37■■□□□ 1.33
TGFBR1-201ENST00000374990 KCNH5Q8NCM2 988 aa23.37■■□□□ 1.33
TGFBR1-201ENST00000374990 SPG7Q9UQ90 795 aa23.37■■□□□ 1.33
TGFBR1-201ENST00000374990 NOC3LQ8WTT2 800 aaKnown RBP23.36■■□□□ 1.33
TGFBR1-201ENST00000374990 FIBPO43427 364 aa23.36■■□□□ 1.33
TGFBR1-201ENST00000374990 KINO60870 393 aaKnown RBP23.36■■□□□ 1.33
TGFBR1-201ENST00000374990 ZNF592Q92610 1267 aa23.36■■□□□ 1.33
TGFBR1-201ENST00000374990 DNAJC2Q99543 621 aaKnown RBP23.35■■□□□ 1.33
TGFBR1-201ENST00000374990 ANKRD36BQ8N2N9 1353 aa23.35■■□□□ 1.33
TGFBR1-201ENST00000374990 HOMER1Q86YM7 354 aa23.35■■□□□ 1.33
TGFBR1-201ENST00000374990 ZSCAN31Q96LW9 406 aaPredicted RBP23.35■■□□□ 1.33
TGFBR1-201ENST00000374990 GRPEL1Q9HAV7 217 aa23.35■■□□□ 1.33
TGFBR1-201ENST00000374990 ITSN2Q9NZM3 1697 aa23.35■■□□□ 1.33
TGFBR1-201ENST00000374990 NME9Q86XW9 330 aa23.34■■□□□ 1.33
TGFBR1-201ENST00000374990 FAM13BQ9NYF5 915 aa23.34■■□□□ 1.33
TGFBR1-201ENST00000374990 SART3Q15020 963 aaKnown RBP23.34■■□□□ 1.33
TGFBR1-201ENST00000374990 DUOX2Q9NRD8 1548 aa23.34■■□□□ 1.33
TGFBR1-201ENST00000374990 XBP1P17861 261 aa23.34■■□□□ 1.33
TGFBR1-201ENST00000374990 PUS7Q96PZ0 661 aaKnown RBP23.34■■□□□ 1.33
TGFBR1-201ENST00000374990 CCDC27Q2M243 656 aa23.34■■□□□ 1.33
TGFBR1-201ENST00000374990 KDM5BQ9UGL1 1544 aa23.33■■□□□ 1.33
TGFBR1-201ENST00000374990 GPS2Q13227 327 aa23.33■■□□□ 1.33
TGFBR1-201ENST00000374990 MTERF4Q7Z6M4 381 aaKnown RBP23.33■■□□□ 1.33
TGFBR1-201ENST00000374990 KIF1BPQ96EK5 621 aa23.33■■□□□ 1.33
TGFBR1-201ENST00000374990 EMILIN1Q9Y6C2 1016 aa23.33■■□□□ 1.33
TGFBR1-201ENST00000374990 DENND4BO75064 1496 aaPredicted RBP23.33■■□□□ 1.33
TGFBR1-201ENST00000374990 KRT85P78386 507 aa23.32■■□□□ 1.32
TGFBR1-201ENST00000374990 MAP7D2Q96T17 732 aa23.32■■□□□ 1.32
TGFBR1-201ENST00000374990 TESK2Q96S53 571 aa23.32■■□□□ 1.32
TGFBR1-201ENST00000374990 BLOC1S2Q6QNY1 142 aa23.32■■□□□ 1.32
TGFBR1-201ENST00000374990 ZNF396Q96N95 335 aaPredicted RBP23.32■■□□□ 1.32
TGFBR1-201ENST00000374990 EXOC6BQ9Y2D4 811 aa23.32■■□□□ 1.32
TGFBR1-201ENST00000374990 CCDC158Q5M9N0 1113 aa23.32■■□□□ 1.32
TGFBR1-201ENST00000374990 MCM10Q7L590 875 aa23.31■■□□□ 1.32
TGFBR1-201ENST00000374990 RAB11FIP3O75154 756 aa23.31■■□□□ 1.32
TGFBR1-201ENST00000374990 IL1RAPL2Q9NP60 686 aa23.31■■□□□ 1.32
TGFBR1-201ENST00000374990 BTBD11A6QL63 1104 aa23.31■■□□□ 1.32
TGFBR1-201ENST00000374990 CFAP43Q8NDM7 1665 aa23.3■■□□□ 1.32
TGFBR1-201ENST00000374990 CCAR2Q8N163 923 aaKnown RBP23.3■■□□□ 1.32
TGFBR1-201ENST00000374990 TRIM5Q9C035 493 aa23.3■■□□□ 1.32
TGFBR1-201ENST00000374990 KRT32Q14532 448 aa23.3■■□□□ 1.32
TGFBR1-201ENST00000374990 BMP2KLQ5H9B9 411 aa23.3■■□□□ 1.32
TGFBR1-201ENST00000374990 ARHGEF12Q9NZN5 1544 aa23.3■■□□□ 1.32
TGFBR1-201ENST00000374990 GLRX3O76003 335 aaKnown RBP23.3■■□□□ 1.32
TGFBR1-201ENST00000374990 CABP4P57796 275 aa23.3■■□□□ 1.32
TGFBR1-201ENST00000374990 HMGN5P82970 282 aaKnown RBP23.3■■□□□ 1.32
TGFBR1-201ENST00000374990 TAF7Q15545 349 aaPredicted RBP23.3■■□□□ 1.32
TGFBR1-201ENST00000374990 KIF6Q6ZMV9 814 aa23.3■■□□□ 1.32
TGFBR1-201ENST00000374990 ASXL1Q8IXJ9 1541 aa23.3■■□□□ 1.32
TGFBR1-201ENST00000374990 MX1P20591 662 aa23.29■■□□□ 1.32
TGFBR1-201ENST00000374990 CCDC70Q6NSX1 233 aa23.29■■□□□ 1.32
TGFBR1-201ENST00000374990 ARHGAP45Q92619 1136 aa23.29■■□□□ 1.32
TGFBR1-201ENST00000374990 PTPRCP08575 1304 aa23.29■■□□□ 1.32
TGFBR1-201ENST00000374990 BRMS1Q9HCU9 246 aa23.29■■□□□ 1.32
TGFBR1-201ENST00000374990 CCDC192P0DO97 292 aa23.28■■□□□ 1.32
TGFBR1-201ENST00000374990 DCTN1Q14203 1278 aa23.28■■□□□ 1.32
TGFBR1-201ENST00000374990 AACSQ86V21 672 aa23.28■■□□□ 1.32
TGFBR1-201ENST00000374990 TTC21BQ7Z4L5 1316 aa23.28■■□□□ 1.32
TGFBR1-201ENST00000374990 OLFM4Q6UX06 510 aa23.28■■□□□ 1.32
TGFBR1-201ENST00000374990 SKAP1Q86WV1 359 aa23.28■■□□□ 1.32
TGFBR1-201ENST00000374990 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
TGFBR1-201ENST00000374990 A0A0U1RQG5 324 aaPredicted RBP23.28■■□□□ 1.32
TGFBR1-201ENST00000374990 FOSBP53539 338 aa23.28■■□□□ 1.32
TGFBR1-201ENST00000374990 LARP1BQ659C4 914 aaKnown RBP23.28■■□□□ 1.32
TGFBR1-201ENST00000374990 JMYQ8N9B5 988 aa23.28■■□□□ 1.32
TGFBR1-201ENST00000374990 SHANK2Q9UPX8 1470 aa23.27■■□□□ 1.32
TGFBR1-201ENST00000374990 VPS53Q5VIR6 699 aa23.27■■□□□ 1.32
TGFBR1-201ENST00000374990 FBXO31Q5XUX0 539 aaPredicted RBP23.27■■□□□ 1.32
TGFBR1-201ENST00000374990 R3HCC1Q9Y3T6 440 aaKnown RBP23.27■■□□□ 1.32
TGFBR1-201ENST00000374990 POLR3AO14802 1390 aaPredicted RBP23.27■■□□□ 1.32
TGFBR1-201ENST00000374990 CEP89Q96ST8 783 aa23.27■■□□□ 1.32
TGFBR1-201ENST00000374990 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.27■■□□□ 1.32
TGFBR1-201ENST00000374990 TBC1D2Q9BYX2 928 aa23.26■■□□□ 1.31
TGFBR1-201ENST00000374990 HDAC1Q13547 482 aaPredicted RBP23.25■■□□□ 1.31
TGFBR1-201ENST00000374990 AMOTQ4VCS5 1084 aa23.25■■□□□ 1.31
TGFBR1-201ENST00000374990 SIL1Q9H173 461 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms